RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 SENP3Q9H4L4 574 aaPredicted RBP6.28□□□□□ -1.4
PTPRD-203ENST00000381196 HECW1Q76N89 1606 aa6.28□□□□□ -1.4
PTPRD-203ENST00000381196 CCDC136Q96JN2 1154 aa6.28□□□□□ -1.4
PTPRD-203ENST00000381196 GOLGA6L3A6NEY3 463 aa6.27□□□□□ -1.41
PTPRD-203ENST00000381196 POLR1AO95602 1720 aaPredicted RBP6.27□□□□□ -1.41
PTPRD-203ENST00000381196 TSPYL1Q9H0U9 437 aa6.27□□□□□ -1.41
PTPRD-203ENST00000381196 ANKRD30AQ9BXX3 1397 aa6.27□□□□□ -1.41
PTPRD-203ENST00000381196 SETD5Q9C0A6 1442 aa6.27□□□□□ -1.41
PTPRD-203ENST00000381196 EHBP1L1Q8N3D4 1523 aa6.26□□□□□ -1.41
PTPRD-203ENST00000381196 ARXQ96QS3 562 aa6.26□□□□□ -1.41
PTPRD-203ENST00000381196 SKOR2Q2VWA4 1001 aaPredicted RBP6.26□□□□□ -1.41
PTPRD-203ENST00000381196 MTUS2Q5JR59 1369 aa6.26□□□□□ -1.41
PTPRD-203ENST00000381196 CNTLNQ9NXG0 1405 aa6.26□□□□□ -1.41
PTPRD-203ENST00000381196 ATAD2BQ9ULI0 1458 aa6.26□□□□□ -1.41
PTPRD-203ENST00000381196 SOGA1O94964 1423 aa6.26□□□□□ -1.41
PTPRD-203ENST00000381196 HMGB1P09429 215 aaKnown RBP6.25□□□□□ -1.41
PTPRD-203ENST00000381196 WDR97A6NE52 1622 aa6.25□□□□□ -1.41
PTPRD-203ENST00000381196 FKBP8Q14318 412 aa6.25□□□□□ -1.41
PTPRD-203ENST00000381196 CSPP1Q1MSJ5 1256 aa6.25□□□□□ -1.41
PTPRD-203ENST00000381196 GCC2Q8IWJ2 1684 aa6.25□□□□□ -1.41
PTPRD-203ENST00000381196 RAPGEF2Q9Y4G8 1499 aa6.25□□□□□ -1.41
PTPRD-203ENST00000381196 CHIC2Q9UKJ5 165 aa6.25□□□□□ -1.41
PTPRD-203ENST00000381196 AKNAQ7Z591 1439 aa6.24□□□□□ -1.41
PTPRD-203ENST00000381196 TPM2P07951 284 aa6.24□□□□□ -1.41
PTPRD-203ENST00000381196 MIA2Q96PC5 1412 aa6.24□□□□□ -1.41
PTPRD-203ENST00000381196 DDX11L8A8MPP1 907 aa6.24□□□□□ -1.41
PTPRD-203ENST00000381196 HDGFP51858 240 aaKnown RBP6.24□□□□□ -1.41
PTPRD-203ENST00000381196 MLECQ14165 292 aa6.23□□□□□ -1.41
PTPRD-203ENST00000381196 SYAP1Q96A49 352 aaPredicted RBP6.23□□□□□ -1.41
PTPRD-203ENST00000381196 ITSN2Q9NZM3 1697 aa6.23□□□□□ -1.41
PTPRD-203ENST00000381196 RRP9O43818 475 aaKnown RBP6.23□□□□□ -1.41
PTPRD-203ENST00000381196 PHF14O94880 888 aa6.23□□□□□ -1.41
PTPRD-203ENST00000381196 KLHL34Q8N239 644 aa6.23□□□□□ -1.41
PTPRD-203ENST00000381196 IPO9Q96P70 1041 aaKnown RBP6.23□□□□□ -1.41
PTPRD-203ENST00000381196 ZMYM4Q5VZL5 1548 aa6.22□□□□□ -1.41
PTPRD-203ENST00000381196 CASC1Q6TDU7 716 aa6.22□□□□□ -1.41
PTPRD-203ENST00000381196 ZBED9Q6R2W3 1325 aa6.22□□□□□ -1.41
PTPRD-203ENST00000381196 DNMBPQ6XZF7 1577 aa6.22□□□□□ -1.41
PTPRD-203ENST00000381196 INSRP06213 1382 aa6.21□□□□□ -1.41
PTPRD-203ENST00000381196 GBP4Q96PP9 640 aa6.21□□□□□ -1.41
PTPRD-203ENST00000381196 NCAPD3P42695 1498 aa6.21□□□□□ -1.42
PTPRD-203ENST00000381196 ADGBQ8N7X0 1667 aa6.21□□□□□ -1.42
PTPRD-203ENST00000381196 BICRAQ9NZM4 1560 aa6.21□□□□□ -1.42
PTPRD-203ENST00000381196 CAVIN1Q6NZI2 390 aaKnown RBP6.21□□□□□ -1.42
PTPRD-203ENST00000381196 MAPK8IP3Q9UPT6 1336 aa6.21□□□□□ -1.42
PTPRD-203ENST00000381196 PRXQ9BXM0 1461 aa6.21□□□□□ -1.42
PTPRD-203ENST00000381196 EIF4G2P78344 907 aaKnown RBP eCLIP6.2□□□□□ -1.42
PTPRD-203ENST00000381196 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.2□□□□□ -1.42
PTPRD-203ENST00000381196 CHMP4CQ96CF2 233 aa6.2□□□□□ -1.42
PTPRD-203ENST00000381196 ARAP1Q96P48 1450 aa6.2□□□□□ -1.42
PTPRD-203ENST00000381196 ATAD2Q6PL18 1390 aa6.2□□□□□ -1.42
PTPRD-203ENST00000381196 TPM3P06753 285 aa6.2□□□□□ -1.42
PTPRD-203ENST00000381196 PDIA4P13667 645 aaKnown RBP6.2□□□□□ -1.42
PTPRD-203ENST00000381196 DEKP35659 375 aaKnown RBP6.2□□□□□ -1.42
PTPRD-203ENST00000381196 CASKIN1Q8WXD9 1431 aa6.2□□□□□ -1.42
PTPRD-203ENST00000381196 RALBP1Q15311 655 aa6.2□□□□□ -1.42
PTPRD-203ENST00000381196 POGKQ9P215 609 aa6.2□□□□□ -1.42
PTPRD-203ENST00000381196 KIF16BQ96L93 1317 aa6.2□□□□□ -1.42
PTPRD-203ENST00000381196 ZMYM3Q14202 1370 aa6.2□□□□□ -1.42
PTPRD-203ENST00000381196 FAM43AQ8N2R8 423 aa6.2□□□□□ -1.42
PTPRD-203ENST00000381196 KDM2AQ9Y2K7 1162 aa6.2□□□□□ -1.42
PTPRD-203ENST00000381196 CHMP4AQ9BY43 222 aa6.19□□□□□ -1.42
PTPRD-203ENST00000381196 MYH16Q9H6N6 1097 aa6.19□□□□□ -1.42
PTPRD-203ENST00000381196 CFDP1Q9UEE9 299 aaPredicted RBP6.19□□□□□ -1.42
PTPRD-203ENST00000381196 TMC1Q8TDI8 760 aa6.19□□□□□ -1.42
PTPRD-203ENST00000381196 MSNP26038 577 aaKnown RBP6.19□□□□□ -1.42
PTPRD-203ENST00000381196 STAC3Q96MF2 364 aa6.19□□□□□ -1.42
PTPRD-203ENST00000381196 CFTRP13569 1480 aa6.18□□□□□ -1.42
PTPRD-203ENST00000381196 ROCK1Q13464 1354 aa6.18□□□□□ -1.42
PTPRD-203ENST00000381196 WDR43Q15061 677 aaKnown RBP eCLIP6.18□□□□□ -1.42
PTPRD-203ENST00000381196 DHX57Q6P158 1386 aaKnown RBP6.18□□□□□ -1.42
PTPRD-203ENST00000381196 HNRNPUQ00839 825 aaKnown RBP eCLIP6.18□□□□□ -1.42
PTPRD-203ENST00000381196 KANK1Q14678 1352 aa6.18□□□□□ -1.42
PTPRD-203ENST00000381196 LRRC9Q6ZRR7 1453 aa6.17□□□□□ -1.42
PTPRD-203ENST00000381196 RBM19Q9Y4C8 960 aaKnown RBP6.17□□□□□ -1.42
PTPRD-203ENST00000381196 ARID3AQ99856 593 aa6.17□□□□□ -1.42
PTPRD-203ENST00000381196 FGD5Q6ZNL6 1462 aa6.17□□□□□ -1.42
PTPRD-203ENST00000381196 HMGN5P82970 282 aaKnown RBP6.17□□□□□ -1.42
PTPRD-203ENST00000381196 WASHC2AQ641Q2 1341 aa6.17□□□□□ -1.42
PTPRD-203ENST00000381196 WASHC2CQ9Y4E1 1318 aa6.17□□□□□ -1.42
PTPRD-203ENST00000381196 CCDC9Q9Y3X0 531 aaKnown RBP6.16□□□□□ -1.42
PTPRD-203ENST00000381196 DHX29Q7Z478 1369 aaKnown RBP6.16□□□□□ -1.42
PTPRD-203ENST00000381196 PRKCSHP14314 528 aaPredicted RBP6.16□□□□□ -1.42
PTPRD-203ENST00000381196 HSP90AA2PQ14568 343 aaPredicted RBP6.16□□□□□ -1.42
PTPRD-203ENST00000381196 UBE2Q2Q8WVN8 375 aa6.16□□□□□ -1.42
PTPRD-203ENST00000381196 MIER1Q8N108 512 aa6.16□□□□□ -1.42
PTPRD-203ENST00000381196 CFAP53Q96M91 514 aa6.16□□□□□ -1.42
PTPRD-203ENST00000381196 ZRSR1Q15695 479 aaKnown RBP6.16□□□□□ -1.42
PTPRD-203ENST00000381196 NESP48681 1621 aa6.16□□□□□ -1.42
PTPRD-203ENST00000381196 PCF11O94913 1555 aaKnown RBP6.16□□□□□ -1.42
PTPRD-203ENST00000381196 CCDC66A2RUB6 948 aa6.15□□□□□ -1.42
PTPRD-203ENST00000381196 FAM193AP78312 1265 aa6.15□□□□□ -1.42
PTPRD-203ENST00000381196 DCAF8L1A6NGE4 600 aa6.15□□□□□ -1.42
PTPRD-203ENST00000381196 EIF2AK4Q9P2K8 1649 aaKnown RBP6.15□□□□□ -1.43
PTPRD-203ENST00000381196 KIAA2012Q0VF49 1180 aa6.15□□□□□ -1.43
PTPRD-203ENST00000381196 CREBRFQ8IUR6 639 aa6.15□□□□□ -1.43
PTPRD-203ENST00000381196 GOLGA6L1Q8N7Z2 621 aa6.15□□□□□ -1.43
PTPRD-203ENST00000381196 HTATSF1O43719 755 aaKnown RBP6.14□□□□□ -1.43
PTPRD-203ENST00000381196 TMX4Q9H1E5 349 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-203ENST00000381196 UACAQ9BZF9 1416 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms