RNA–Protein interactions for RNA: ENST00000380875.7

FREM1-201, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 1 (best)

Gene FREM1, Length 6,126 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-201ENST00000380875 GOLGA6L6A8MZA4 724 aa11.85□□□□□ -0.51
FREM1-201ENST00000380875 AMER1Q5JTC6 1135 aaPredicted RBP11.85□□□□□ -0.51
FREM1-201ENST00000380875 DDRGK1Q96HY6 314 aa11.84□□□□□ -0.51
FREM1-201ENST00000380875 NUTM2FA1L443 756 aa11.84□□□□□ -0.51
FREM1-201ENST00000380875 TRIM44Q96DX7 344 aaPredicted RBP11.84□□□□□ -0.51
FREM1-201ENST00000380875 LTV1Q96GA3 475 aaPredicted RBP11.83□□□□□ -0.52
FREM1-201ENST00000380875 APBB1O00213 710 aa11.83□□□□□ -0.52
FREM1-201ENST00000380875 FRAT2O75474 233 aaPredicted RBP11.82□□□□□ -0.52
FREM1-201ENST00000380875 CYB5RLQ6IPT4 315 aa11.82□□□□□ -0.52
FREM1-201ENST00000380875 NACADO15069 1562 aa11.82□□□□□ -0.52
FREM1-201ENST00000380875 MS4A1P11836 297 aa11.82□□□□□ -0.52
FREM1-201ENST00000380875 HSP90AB1P08238 724 aaKnown RBP11.81□□□□□ -0.52
FREM1-201ENST00000380875 VPS53Q5VIR6 699 aa11.81□□□□□ -0.52
FREM1-201ENST00000380875 DNTTIP2Q5QJE6 756 aaKnown RBP11.8□□□□□ -0.52
FREM1-201ENST00000380875 GOLGA6L4A6NEF3 574 aa11.8□□□□□ -0.52
FREM1-201ENST00000380875 CUX2O14529 1486 aa11.8□□□□□ -0.52
FREM1-201ENST00000380875 RGS3P49796 1198 aa11.79□□□□□ -0.52
FREM1-201ENST00000380875 MCCP23508 829 aa11.79□□□□□ -0.52
FREM1-201ENST00000380875 PDS5BQ9NTI5 1447 aa11.78□□□□□ -0.52
FREM1-201ENST00000380875 EFCAB2Q5VUJ9 269 aa11.78□□□□□ -0.52
FREM1-201ENST00000380875 WASHC2CQ9Y4E1 1318 aa11.78□□□□□ -0.52
FREM1-201ENST00000380875 KIF3BO15066 747 aa11.78□□□□□ -0.52
FREM1-201ENST00000380875 AMPHP49418 695 aa11.78□□□□□ -0.52
FREM1-201ENST00000380875 CWC22Q9HCG8 908 aaKnown RBP11.78□□□□□ -0.52
FREM1-201ENST00000380875 SPAG9O60271 1321 aaKnown RBP11.77□□□□□ -0.53
FREM1-201ENST00000380875 FBXW7Q969H0 707 aa11.76□□□□□ -0.53
FREM1-201ENST00000380875 CECR2Q9BXF3 1484 aa11.76□□□□□ -0.53
FREM1-201ENST00000380875 CEP162Q5TB80 1403 aa11.76□□□□□ -0.53
FREM1-201ENST00000380875 PDE4CQ08493 712 aa11.75□□□□□ -0.53
FREM1-201ENST00000380875 CARMIL1Q5VZK9 1371 aa11.75□□□□□ -0.53
FREM1-201ENST00000380875 SYTL4Q96C24 671 aaPredicted RBP11.75□□□□□ -0.53
FREM1-201ENST00000380875 CTDP1Q9Y5B0 961 aaPredicted RBP11.74□□□□□ -0.53
FREM1-201ENST00000380875 TRIM34Q9BYJ4 488 aa11.74□□□□□ -0.53
FREM1-201ENST00000380875 KIAA2012Q0VF49 1180 aa11.74□□□□□ -0.53
FREM1-201ENST00000380875 KIAA1211Q6ZU35 1233 aa11.74□□□□□ -0.53
FREM1-201ENST00000380875 EEA1Q15075 1411 aa11.73□□□□□ -0.53
FREM1-201ENST00000380875 RAD21O60216 631 aa11.73□□□□□ -0.53
FREM1-201ENST00000380875 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.73□□□□□ -0.536e-7■■■□□ 16.9
FREM1-201ENST00000380875 ANP32EQ9BTT0 268 aa11.73□□□□□ -0.53
FREM1-201ENST00000380875 STK31Q9BXU1 1019 aa11.73□□□□□ -0.53
FREM1-201ENST00000380875 CEP164Q9UPV0 1460 aa11.72□□□□□ -0.53
FREM1-201ENST00000380875 SIN3AQ96ST3 1273 aa11.72□□□□□ -0.53
FREM1-201ENST00000380875 ANO8Q9HCE9 1232 aaPredicted RBP11.72□□□□□ -0.53
FREM1-201ENST00000380875 TOMM22Q9NS69 142 aa11.72□□□□□ -0.53
FREM1-201ENST00000380875 U2AF1L5P0DN76 240 aaPredicted RBP11.72□□□□□ -0.53
FREM1-201ENST00000380875 U2AF1Q01081 240 aaKnown RBP eCLIP11.72□□□□□ -0.536e-7■□□□□ 9.3
FREM1-201ENST00000380875 NRDCO43847 1150 aa11.71□□□□□ -0.53
FREM1-201ENST00000380875 CALD1Q05682 793 aaKnown RBP11.71□□□□□ -0.53
FREM1-201ENST00000380875 PKD2Q13563 968 aa11.71□□□□□ -0.53
FREM1-201ENST00000380875 FHAD1B1AJZ9 1412 aa11.71□□□□□ -0.54
FREM1-201ENST00000380875 MARCH6O60337 910 aa11.71□□□□□ -0.54
FREM1-201ENST00000380875 HSP90B1P14625 803 aaKnown RBP11.7□□□□□ -0.54
FREM1-201ENST00000380875 RASSF8Q8NHQ8 419 aa11.7□□□□□ -0.54
FREM1-201ENST00000380875 CNKSR2Q8WXI2 1034 aa11.7□□□□□ -0.54
FREM1-201ENST00000380875 GPATCH3Q96I76 525 aa11.7□□□□□ -0.54
FREM1-201ENST00000380875 GLIPR1L2Q4G1C9 344 aa11.69□□□□□ -0.54
FREM1-201ENST00000380875 HNRNPMP52272 730 aaKnown RBP eCLIP11.69□□□□□ -0.54
FREM1-201ENST00000380875 ROCK2O75116 1388 aaKnown RBP11.69□□□□□ -0.54
FREM1-201ENST00000380875 SOGA1O94964 1423 aa11.69□□□□□ -0.54
FREM1-201ENST00000380875 C1orf141Q5JVX7 400 aa11.68□□□□□ -0.54
FREM1-201ENST00000380875 DRC7Q8IY82 874 aa11.68□□□□□ -0.54
FREM1-201ENST00000380875 OSCARQ8IYS5 282 aa11.68□□□□□ -0.54
FREM1-201ENST00000380875 TERF2IPQ9NYB0 399 aa11.68□□□□□ -0.54
FREM1-201ENST00000380875 PPP1R1BQ9UD71 204 aaPredicted RBP11.68□□□□□ -0.54
FREM1-201ENST00000380875 EIF3AQ14152 1382 aaKnown RBP11.68□□□□□ -0.54
FREM1-201ENST00000380875 SF3B2Q13435 895 aaKnown RBP11.68□□□□□ -0.54
FREM1-201ENST00000380875 CHAF1AQ13111 956 aaPredicted RBP11.68□□□□□ -0.54
FREM1-201ENST00000380875 FOXD1Q16676 465 aa11.68□□□□□ -0.54
FREM1-201ENST00000380875 TCEAL9Q9UHQ7 104 aa11.68□□□□□ -0.54
FREM1-201ENST00000380875 SLC4A10Q6U841 1118 aa11.67□□□□□ -0.54
FREM1-201ENST00000380875 TDRD9Q8NDG6 1382 aaKnown RBP11.67□□□□□ -0.54
FREM1-201ENST00000380875 DCAF1Q9Y4B6 1507 aa11.67□□□□□ -0.54
FREM1-201ENST00000380875 MIER1Q8N108 512 aa11.67□□□□□ -0.54
FREM1-201ENST00000380875 ITPRIPQ8IWB1 547 aa11.67□□□□□ -0.54
FREM1-201ENST00000380875 NOC3LQ8WTT2 800 aaKnown RBP11.66□□□□□ -0.54
FREM1-201ENST00000380875 CHMP4AQ9BY43 222 aa11.66□□□□□ -0.54
FREM1-201ENST00000380875 IPO8O15397 1037 aaKnown RBP11.66□□□□□ -0.54
FREM1-201ENST00000380875 HSCBQ8IWL3 235 aa11.66□□□□□ -0.54
FREM1-201ENST00000380875 NOL10Q9BSC4 688 aaKnown RBP11.66□□□□□ -0.54
FREM1-201ENST00000380875 SPRYD3Q8NCJ5 442 aa11.66□□□□□ -0.54
FREM1-201ENST00000380875 NGEFQ8N5V2 710 aa11.65□□□□□ -0.54
FREM1-201ENST00000380875 ERICH6BQ5W0A0 696 aa11.64□□□□□ -0.55
FREM1-201ENST00000380875 ARHGAP35Q9NRY4 1499 aa11.64□□□□□ -0.55
FREM1-201ENST00000380875 ATF3P18847 181 aa11.64□□□□□ -0.55
FREM1-201ENST00000380875 NUP155O75694 1391 aa11.64□□□□□ -0.55
FREM1-201ENST00000380875 FAM69CQ0P6D2 419 aa11.64□□□□□ -0.55
FREM1-201ENST00000380875 L1TD1Q5T7N2 865 aaKnown RBP11.64□□□□□ -0.55
FREM1-201ENST00000380875 SUPT16HQ9Y5B9 1047 aaKnown RBP11.64□□□□□ -0.55
FREM1-201ENST00000380875 PSME1Q06323 249 aa11.63□□□□□ -0.55
FREM1-201ENST00000380875 TTC5Q8N0Z6 440 aa11.63□□□□□ -0.55
FREM1-201ENST00000380875 TRIM6-TRIM34B2RNG4 842 aa11.63□□□□□ -0.55
FREM1-201ENST00000380875 CREBRFQ8IUR6 639 aa11.63□□□□□ -0.55
FREM1-201ENST00000380875 KTN1Q86UP2 1357 aaKnown RBP11.63□□□□□ -0.55
FREM1-201ENST00000380875 ANKRD30AQ9BXX3 1397 aa11.62□□□□□ -0.55
FREM1-201ENST00000380875 WWC1Q8IX03 1113 aa11.62□□□□□ -0.55
FREM1-201ENST00000380875 B4GALNT3Q6L9W6 998 aa11.62□□□□□ -0.55
FREM1-201ENST00000380875 SAMD1Q6SPF0 538 aaPredicted RBP11.62□□□□□ -0.55
FREM1-201ENST00000380875 AMOTL1Q8IY63 956 aa11.62□□□□□ -0.55
FREM1-201ENST00000380875 BAZ1AQ9NRL2 1556 aaPredicted RBP11.61□□□□□ -0.55
FREM1-201ENST00000380875 HDAC5Q9UQL6 1122 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms