RNA–Protein interactions for RNA: ENST00000380725.1

CDKN1C-201, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDKN1C, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-201ENST00000380725 CDC42BPBQ9Y5S2 1711 aa28.46■■■□□ 2.15
CDKN1C-201ENST00000380725 ARID4BQ4LE39 1312 aaPredicted RBP28.42■■■□□ 2.14
CDKN1C-201ENST00000380725 POGZQ7Z3K3 1410 aa28.41■■■□□ 2.14
CDKN1C-201ENST00000380725 ZMYM4Q5VZL5 1548 aa28.4■■■□□ 2.14
CDKN1C-201ENST00000380725 PREX2Q70Z35 1606 aa28.39■■■□□ 2.13
CDKN1C-201ENST00000380725 MTUS2Q5JR59 1369 aa28.38■■■□□ 2.13
CDKN1C-201ENST00000380725 CDC42BPAQ5VT25 1732 aa28.38■■■□□ 2.13
CDKN1C-201ENST00000380725 MAGI2Q86UL8 1455 aa28.38■■■□□ 2.13
CDKN1C-201ENST00000380725 ARHGEF40Q8TER5 1519 aa28.37■■■□□ 2.13
CDKN1C-201ENST00000380725 AFAP1Q8N556 730 aa28.36■■■□□ 2.13
CDKN1C-201ENST00000380725 ZFYVE16Q7Z3T8 1539 aa28.36■■■□□ 2.13
CDKN1C-201ENST00000380725 YEATS2Q9ULM3 1422 aa28.35■■■□□ 2.13
CDKN1C-201ENST00000380725 ZNF777Q9ULD5 760 aaPredicted RBP28.32■■■□□ 2.12
CDKN1C-201ENST00000380725 ZNF518AQ6AHZ1 1483 aa28.31■■■□□ 2.12
CDKN1C-201ENST00000380725 GPATCH8Q9UKJ3 1502 aaKnown RBP28.31■■■□□ 2.12
CDKN1C-201ENST00000380725 MYT1LQ9UL68 1186 aa28.3■■■□□ 2.12
CDKN1C-201ENST00000380725 CCNB3Q8WWL7 1395 aa28.29■■■□□ 2.12
CDKN1C-201ENST00000380725 BCORL1Q5H9F3 1711 aa28.29■■■□□ 2.12
CDKN1C-201ENST00000380725 ADAMTSL3P82987 1691 aa28.29■■■□□ 2.12
CDKN1C-201ENST00000380725 CFDP1Q9UEE9 299 aaPredicted RBP28.27■■■□□ 2.12
CDKN1C-201ENST00000380725 VPS8Q8N3P4 1428 aa28.26■■■□□ 2.12
CDKN1C-201ENST00000380725 ARHGEF12Q9NZN5 1544 aa28.26■■■□□ 2.11
CDKN1C-201ENST00000380725 ABCC1P33527 1531 aa28.25■■■□□ 2.11
CDKN1C-201ENST00000380725 ATP10AO60312 1499 aa28.25■■■□□ 2.11
CDKN1C-201ENST00000380725 EHBP1L1Q8N3D4 1523 aa28.24■■■□□ 2.11
CDKN1C-201ENST00000380725 TRAPPC8Q9Y2L5 1435 aa28.24■■■□□ 2.11
CDKN1C-201ENST00000380725 KDM5CP41229 1560 aa28.24■■■□□ 2.11
CDKN1C-201ENST00000380725 ITSN2Q9NZM3 1697 aa28.23■■■□□ 2.11
CDKN1C-201ENST00000380725 SIGLEC1Q9BZZ2 1709 aa28.21■■■□□ 2.11
CDKN1C-201ENST00000380725 HNRNPMP52272 730 aaKnown RBP eCLIP28.2■■■□□ 2.1
CDKN1C-201ENST00000380725 MLECQ14165 292 aa28.2■■■□□ 2.1
CDKN1C-201ENST00000380725 SAMD9LQ8IVG5 1584 aa28.2■■■□□ 2.1
CDKN1C-201ENST00000380725 C9orf84Q5VXU9 1444 aa28.18■■■□□ 2.1
CDKN1C-201ENST00000380725 PTPRMP28827 1452 aa28.18■■■□□ 2.1
CDKN1C-201ENST00000380725 MLH3Q9UHC1 1453 aa28.18■■■□□ 2.1
CDKN1C-201ENST00000380725 TIAM1Q13009 1591 aa28.18■■■□□ 2.1
CDKN1C-201ENST00000380725 HECW2Q9P2P5 1572 aa28.18■■■□□ 2.1
CDKN1C-201ENST00000380725 MADDQ8WXG6 1647 aa28.18■■■□□ 2.1
CDKN1C-201ENST00000380725 SUPT6HQ7KZ85 1726 aaKnown RBP28.14■■■□□ 2.1
CDKN1C-201ENST00000380725 PLEKHH2Q8IVE3 1493 aa28.14■■■□□ 2.09
CDKN1C-201ENST00000380725 SYCP2Q9BX26 1530 aa28.13■■■□□ 2.09
CDKN1C-201ENST00000380725 KIAA1107Q9UPP5 1409 aa28.13■■■□□ 2.09
CDKN1C-201ENST00000380725 DIP2CQ9Y2E4 1556 aa28.11■■■□□ 2.09
CDKN1C-201ENST00000380725 RIMS1Q86UR5 1692 aaKnown RBP28.11■■■□□ 2.09
CDKN1C-201ENST00000380725 NCOA2Q15596 1464 aa28.11■■■□□ 2.09
CDKN1C-201ENST00000380725 ZNF644Q9H582 1327 aaPredicted RBP28.11■■■□□ 2.09
CDKN1C-201ENST00000380725 SPAG9O60271 1321 aaKnown RBP28.1■■■□□ 2.09
CDKN1C-201ENST00000380725 KIDINS220Q9ULH0 1771 aa28.09■■■□□ 2.09
CDKN1C-201ENST00000380725 ABCA6Q8N139 1617 aa28.09■■■□□ 2.09
CDKN1C-201ENST00000380725 LRRC9Q6ZRR7 1453 aa28.08■■■□□ 2.09
CDKN1C-201ENST00000380725 MAP3K1Q13233 1512 aa28.07■■■□□ 2.08
CDKN1C-201ENST00000380725 KANK4Q5T7N3 995 aaPredicted RBP28.06■■■□□ 2.08
CDKN1C-201ENST00000380725 PLPPR3Q6T4P5 718 aa28.05■■■□□ 2.08
CDKN1C-201ENST00000380725 FER1L4A9Z1Z3 1794 aa28.04■■■□□ 2.08
CDKN1C-201ENST00000380725 APLP2Q06481 763 aa28.04■■■□□ 2.08
CDKN1C-201ENST00000380725 REREQ9P2R6 1566 aa28.03■■■□□ 2.08
CDKN1C-201ENST00000380725 MBD5Q9P267 1494 aa27.98■■■□□ 2.07
CDKN1C-201ENST00000380725 AGLP35573 1532 aa27.97■■■□□ 2.07
CDKN1C-201ENST00000380725 ATP7AQ04656 1500 aa27.97■■■□□ 2.07
CDKN1C-201ENST00000380725 RSPH4AQ5TD94 716 aa27.94■■■□□ 2.06
CDKN1C-201ENST00000380725 SENP3Q9H4L4 574 aaPredicted RBP27.94■■■□□ 2.06
CDKN1C-201ENST00000380725 INO80Q9ULG1 1556 aaPredicted RBP27.94■■■□□ 2.06
CDKN1C-201ENST00000380725 CAMSAP2Q08AD1 1489 aa27.93■■■□□ 2.06
CDKN1C-201ENST00000380725 ESF1Q9H501 851 aaKnown RBP27.92■■■□□ 2.06
CDKN1C-201ENST00000380725 CEBPAP49715 358 aaPredicted RBP27.91■■■□□ 2.06
CDKN1C-201ENST00000380725 RTEL1-TNFRSF6BF6WH68 1400 aa27.88■■■□□ 2.05
CDKN1C-201ENST00000380725 A2MP01023 1474 aa27.88■■■□□ 2.05
CDKN1C-201ENST00000380725 CCDC141Q6ZP82 1450 aa27.87■■■□□ 2.05
CDKN1C-201ENST00000380725 MYOM3Q5VTT5 1437 aa27.85■■■□□ 2.05
CDKN1C-201ENST00000380725 ADGBQ8N7X0 1667 aa27.85■■■□□ 2.05
CDKN1C-201ENST00000380725 TSPY4P0CV99 314 aa27.85■■■□□ 2.05
CDKN1C-201ENST00000380725 TSPY10P0CW01 314 aa27.85■■■□□ 2.05
CDKN1C-201ENST00000380725 MIA2Q96PC5 1412 aa27.83■■■□□ 2.05
CDKN1C-201ENST00000380725 LMTK3Q96Q04 1460 aa27.83■■■□□ 2.04
CDKN1C-201ENST00000380725 SETD1BQ9UPS6 1966 aaKnown RBP27.82■■■□□ 2.04
CDKN1C-201ENST00000380725 ARHGEF5Q12774 1597 aa27.82■■■□□ 2.04
CDKN1C-201ENST00000380725 PLXNC1O60486 1568 aa27.81■■■□□ 2.04
CDKN1C-201ENST00000380725 GGT6Q6P531 493 aa27.8■■■□□ 2.04
CDKN1C-201ENST00000380725 DHX29Q7Z478 1369 aaKnown RBP27.78■■■□□ 2.04
CDKN1C-201ENST00000380725 CNTLNQ9NXG0 1405 aa27.77■■■□□ 2.04
CDKN1C-201ENST00000380725 HSPA2P54652 639 aa27.77■■■□□ 2.04
CDKN1C-201ENST00000380725 C3P01024 1663 aa27.77■■■□□ 2.04
CDKN1C-201ENST00000380725 PHF23Q9BUL5 403 aaPredicted RBP27.75■■■□□ 2.03
CDKN1C-201ENST00000380725 PPP6R1Q9UPN7 881 aa27.72■■■□□ 2.03
CDKN1C-201ENST00000380725 PREX1Q8TCU6 1659 aa27.72■■■□□ 2.03
CDKN1C-201ENST00000380725 KIF3BO15066 747 aa27.71■■■□□ 2.03
CDKN1C-201ENST00000380725 ZMYM3Q14202 1370 aa27.71■■■□□ 2.03
CDKN1C-201ENST00000380725 MROH2AA6NES4 1674 aa27.68■■■□□ 2.02
CDKN1C-201ENST00000380725 CLTCQ00610 1675 aaKnown RBP27.68■■■□□ 2.02
CDKN1C-201ENST00000380725 PTPN23Q9H3S7 1636 aa27.67■■■□□ 2.02
CDKN1C-201ENST00000380725 MAST1Q9Y2H9 1570 aa27.66■■■□□ 2.02
CDKN1C-201ENST00000380725 UHRF1BP1Q6BDS2 1440 aa27.65■■■□□ 2.02
CDKN1C-201ENST00000380725 FGD6Q6ZV73 1430 aa27.65■■■□□ 2.02
CDKN1C-201ENST00000380725 ABCC5O15440 1437 aa27.59■■■□□ 2.01
CDKN1C-201ENST00000380725 NPATQ14207 1427 aa27.58■■■□□ 2.01
CDKN1C-201ENST00000380725 TCOF1Q13428 1488 aaKnown RBP27.58■■■□□ 2.01
CDKN1C-201ENST00000380725 WASHC2CQ9Y4E1 1318 aa27.57■■■□□ 2
CDKN1C-201ENST00000380725 DAPK1P53355 1430 aa27.55■■■□□ 2
CDKN1C-201ENST00000380725 CROCC2H7BZ55 1655 aa27.54■■■□□ 2
CDKN1C-201ENST00000380725 DNMT1P26358 1616 aaKnown RBP27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms