RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 NRDCO43847 1150 aa20.46■□□□□ 0.87
COL2A1-202ENST00000380518 GOLGA6L4A6NEF3 574 aa20.45■□□□□ 0.86
COL2A1-202ENST00000380518 MCCP23508 829 aa20.45■□□□□ 0.86
COL2A1-202ENST00000380518 RTN4Q9NQC3 1192 aaKnown RBP20.45■□□□□ 0.86
COL2A1-202ENST00000380518 IPO8O15397 1037 aaKnown RBP20.44■□□□□ 0.86
COL2A1-202ENST00000380518 RALBP1Q15311 655 aa20.44■□□□□ 0.86
COL2A1-202ENST00000380518 RAB3GAP2Q9H2M9 1393 aa20.43■□□□□ 0.86
COL2A1-202ENST00000380518 SAFB2Q14151 953 aaKnown RBP eCLIP20.43■□□□□ 0.86
COL2A1-202ENST00000380518 MPHOSPH9Q99550 1183 aa20.43■□□□□ 0.86
COL2A1-202ENST00000380518 FOXD1Q16676 465 aa20.43■□□□□ 0.86
COL2A1-202ENST00000380518 RCAN3Q9UKA8 241 aa20.42■□□□□ 0.86
COL2A1-202ENST00000380518 L1TD1Q5T7N2 865 aaKnown RBP20.42■□□□□ 0.86
COL2A1-202ENST00000380518 NAP1L2Q9ULW6 460 aaPredicted RBP20.42■□□□□ 0.86
COL2A1-202ENST00000380518 SOX12O15370 315 aa20.41■□□□□ 0.86
COL2A1-202ENST00000380518 HDGFL2Q7Z4V5 671 aaPredicted RBP20.41■□□□□ 0.86
COL2A1-202ENST00000380518 GGT6Q6P531 493 aa20.4■□□□□ 0.86
COL2A1-202ENST00000380518 RTF1Q92541 710 aaKnown RBP20.4■□□□□ 0.86
COL2A1-202ENST00000380518 NPHP1O15259 732 aa20.4■□□□□ 0.86
COL2A1-202ENST00000380518 TAOK2Q9UL54 1235 aa20.4■□□□□ 0.86
COL2A1-202ENST00000380518 FMN1Q68DA7 1419 aa20.39■□□□□ 0.86
COL2A1-202ENST00000380518 CARMIL2Q6F5E8 1435 aa20.39■□□□□ 0.85
COL2A1-202ENST00000380518 NUP155O75694 1391 aa20.38■□□□□ 0.85
COL2A1-202ENST00000380518 ROCK2O75116 1388 aaKnown RBP20.38■□□□□ 0.85
COL2A1-202ENST00000380518 GOLGA2Q08379 1002 aa20.37■□□□□ 0.85
COL2A1-202ENST00000380518 MLECQ14165 292 aa20.37■□□□□ 0.85
COL2A1-202ENST00000380518 CCDC88BA6NC98 1476 aa20.37■□□□□ 0.85
COL2A1-202ENST00000380518 CALD1Q05682 793 aaKnown RBP20.37■□□□□ 0.85
COL2A1-202ENST00000380518 U2AF1L5P0DN76 240 aaPredicted RBP20.36■□□□□ 0.85
COL2A1-202ENST00000380518 U2AF1Q01081 240 aaKnown RBP eCLIP20.36■□□□□ 0.85
COL2A1-202ENST00000380518 TCERG1O14776 1098 aaKnown RBP20.36■□□□□ 0.85
COL2A1-202ENST00000380518 RWDD1Q9H446 243 aaPredicted RBP20.35■□□□□ 0.85
COL2A1-202ENST00000380518 STK26Q9P289 416 aa20.35■□□□□ 0.85
COL2A1-202ENST00000380518 ANKRD30AQ9BXX3 1397 aa20.35■□□□□ 0.85
COL2A1-202ENST00000380518 DEKP35659 375 aaKnown RBP20.34■□□□□ 0.85
COL2A1-202ENST00000380518 EFCAB2Q5VUJ9 269 aa20.33■□□□□ 0.85
COL2A1-202ENST00000380518 SPRYD3Q8NCJ5 442 aa20.33■□□□□ 0.85
COL2A1-202ENST00000380518 CHAF1AQ13111 956 aaPredicted RBP20.32■□□□□ 0.84
COL2A1-202ENST00000380518 MSNP26038 577 aaKnown RBP20.31■□□□□ 0.84
COL2A1-202ENST00000380518 ABCC8Q09428 1581 aa20.31■□□□□ 0.84
COL2A1-202ENST00000380518 TULP1O00294 542 aaPredicted RBP20.31■□□□□ 0.84
COL2A1-202ENST00000380518 MROH2BQ7Z745 1585 aa20.3■□□□□ 0.84
COL2A1-202ENST00000380518 KIAA1211Q6ZU35 1233 aa20.29■□□□□ 0.84
COL2A1-202ENST00000380518 GBP4Q96PP9 640 aa20.28■□□□□ 0.84
COL2A1-202ENST00000380518 APBB1O00213 710 aa20.28■□□□□ 0.84
COL2A1-202ENST00000380518 ITPRIPQ8IWB1 547 aa20.28■□□□□ 0.84
COL2A1-202ENST00000380518 L3MBTL2Q969R5 705 aa20.28■□□□□ 0.84
COL2A1-202ENST00000380518 EIF3AQ14152 1382 aaKnown RBP20.27■□□□□ 0.84
COL2A1-202ENST00000380518 PTMSP20962 102 aa20.27■□□□□ 0.83
COL2A1-202ENST00000380518 TDRD9Q8NDG6 1382 aaKnown RBP20.26■□□□□ 0.83
COL2A1-202ENST00000380518 NLRP13Q86W25 1043 aa20.26■□□□□ 0.83
COL2A1-202ENST00000380518 PMFBP1Q8TBY8 1022 aa20.25■□□□□ 0.83
COL2A1-202ENST00000380518 CHMP4AQ9BY43 222 aa20.25■□□□□ 0.83
COL2A1-202ENST00000380518 PDS5BQ9NTI5 1447 aa20.25■□□□□ 0.83
COL2A1-202ENST00000380518 PDE3BQ13370 1112 aa20.24■□□□□ 0.83
COL2A1-202ENST00000380518 SMARCA2P51531 1590 aa20.22■□□□□ 0.83
COL2A1-202ENST00000380518 DRC7Q8IY82 874 aa20.22■□□□□ 0.83
COL2A1-202ENST00000380518 SLKQ9H2G2 1235 aaPredicted RBP20.21■□□□□ 0.83
COL2A1-202ENST00000380518 RSPH4AQ5TD94 716 aa20.21■□□□□ 0.83
COL2A1-202ENST00000380518 TERF2IPQ9NYB0 399 aa20.2■□□□□ 0.82
COL2A1-202ENST00000380518 SMC4Q9NTJ3 1288 aa20.2■□□□□ 0.82
COL2A1-202ENST00000380518 STK31Q9BXU1 1019 aa20.19■□□□□ 0.82
COL2A1-202ENST00000380518 KIF3BO15066 747 aa20.19■□□□□ 0.82
COL2A1-202ENST00000380518 SPAG9O60271 1321 aaKnown RBP20.17■□□□□ 0.82
COL2A1-202ENST00000380518 PAK3O75914 559 aaPredicted RBP20.17■□□□□ 0.82
COL2A1-202ENST00000380518 GNL2Q13823 731 aaKnown RBP20.17■□□□□ 0.82
COL2A1-202ENST00000380518 TSHZ2Q9NRE2 1034 aa20.16■□□□□ 0.82
COL2A1-202ENST00000380518 PHLDB1Q86UU1 1377 aa20.15■□□□□ 0.82
COL2A1-202ENST00000380518 HMMRO75330 724 aa20.15■□□□□ 0.82
COL2A1-202ENST00000380518 HDAC5Q9UQL6 1122 aa20.15■□□□□ 0.82
COL2A1-202ENST00000380518 TRHP20396 242 aaPredicted RBP20.15■□□□□ 0.82
COL2A1-202ENST00000380518 IPO9Q96P70 1041 aaKnown RBP20.15■□□□□ 0.82
COL2A1-202ENST00000380518 CENPJQ9HC77 1338 aaPredicted RBP20.15■□□□□ 0.82
COL2A1-202ENST00000380518 HTATSF1O43719 755 aaKnown RBP20.14■□□□□ 0.82
COL2A1-202ENST00000380518 HNRNPMP52272 730 aaKnown RBP eCLIP20.14■□□□□ 0.81
COL2A1-202ENST00000380518 RAPGEF2Q9Y4G8 1499 aa20.14■□□□□ 0.81
COL2A1-202ENST00000380518 MFAP1P55081 439 aaKnown RBP20.13■□□□□ 0.81
COL2A1-202ENST00000380518 SYAP1Q96A49 352 aaPredicted RBP20.13■□□□□ 0.81
COL2A1-202ENST00000380518 GZF1Q9H116 711 aaPredicted RBP20.13■□□□□ 0.81
COL2A1-202ENST00000380518 KIAA2012Q0VF49 1180 aa20.13■□□□□ 0.81
COL2A1-202ENST00000380518 FHOD3Q2V2M9 1422 aa20.13■□□□□ 0.81
COL2A1-202ENST00000380518 CLUAP1Q96AJ1 413 aa20.12■□□□□ 0.81
COL2A1-202ENST00000380518 CCDC18Q5T9S5 1454 aa20.12■□□□□ 0.81
COL2A1-202ENST00000380518 CSB-PGBD3P0DP91 1061 aa20.11■□□□□ 0.81
COL2A1-202ENST00000380518 LMOD3Q0VAK6 560 aa20.11■□□□□ 0.81
COL2A1-202ENST00000380518 CCDC146Q8IYE0 955 aa20.1■□□□□ 0.81
COL2A1-202ENST00000380518 KIF15Q9NS87 1388 aa20.09■□□□□ 0.81
COL2A1-202ENST00000380518 GPATCH3Q96I76 525 aa20.08■□□□□ 0.8
COL2A1-202ENST00000380518 MYBBP1AQ9BQG0 1328 aaKnown RBP20.08■□□□□ 0.8
COL2A1-202ENST00000380518 ISY1Q9ULR0 285 aaKnown RBP20.07■□□□□ 0.8
COL2A1-202ENST00000380518 TOP2AP11388 1531 aaKnown RBP20.06■□□□□ 0.8
COL2A1-202ENST00000380518 TRIM6-TRIM34B2RNG4 842 aa20.06■□□□□ 0.8
COL2A1-202ENST00000380518 ZNF330Q9Y3S2 320 aaPredicted RBP20.06■□□□□ 0.8
COL2A1-202ENST00000380518 GOLGA6L3A6NEY3 463 aa20.05■□□□□ 0.8
COL2A1-202ENST00000380518 WASHC2CQ9Y4E1 1318 aa20.05■□□□□ 0.8
COL2A1-202ENST00000380518 ST20-MTHFSA0A0A6YYL1 179 aa20.05■□□□□ 0.8
COL2A1-202ENST00000380518 DHX57Q6P158 1386 aaKnown RBP20.04■□□□□ 0.8
COL2A1-202ENST00000380518 GORABQ5T7V8 394 aa20.04■□□□□ 0.8
COL2A1-202ENST00000380518 SLC4A10Q6U841 1118 aa20.03■□□□□ 0.8
COL2A1-202ENST00000380518 CADPSQ9ULU8 1353 aa20.03■□□□□ 0.8
COL2A1-202ENST00000380518 NGDNQ8NEJ9 315 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms