RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 ARHGAP35Q9NRY4 1499 aa21.6■■□□□ 1.05
COL4A3BP-203ENST00000380494 IPO8O15397 1037 aaKnown RBP21.6■■□□□ 1.05
COL4A3BP-203ENST00000380494 PDE3BQ13370 1112 aa21.6■■□□□ 1.05
COL4A3BP-203ENST00000380494 CHMP7Q8WUX9 453 aaPredicted RBP21.59■■□□□ 1.05
COL4A3BP-203ENST00000380494 GSE1Q14687 1217 aa21.58■■□□□ 1.05
COL4A3BP-203ENST00000380494 DDX11L8A8MPP1 907 aa21.58■■□□□ 1.04
COL4A3BP-203ENST00000380494 OS9Q13438 667 aaPredicted RBP21.58■■□□□ 1.04
COL4A3BP-203ENST00000380494 TNNT3P45378 269 aaPredicted RBP21.58■■□□□ 1.04
COL4A3BP-203ENST00000380494 PPP1R15AO75807 674 aaPredicted RBP21.57■■□□□ 1.04
COL4A3BP-203ENST00000380494 HTATSF1O43719 755 aaKnown RBP21.55■■□□□ 1.04
COL4A3BP-203ENST00000380494 RAB3GAP2Q9H2M9 1393 aa21.53■■□□□ 1.04
COL4A3BP-203ENST00000380494 U2SURPO15042 1029 aaKnown RBP21.53■■□□□ 1.04
COL4A3BP-203ENST00000380494 AMER1Q5JTC6 1135 aaPredicted RBP21.51■■□□□ 1.03
COL4A3BP-203ENST00000380494 CALD1Q05682 793 aaKnown RBP21.51■■□□□ 1.03
COL4A3BP-203ENST00000380494 CSPP1Q1MSJ5 1256 aa21.51■■□□□ 1.03
COL4A3BP-203ENST00000380494 DCAF11Q8TEB1 546 aa21.51■■□□□ 1.03
COL4A3BP-203ENST00000380494 BAZ1BQ9UIG0 1483 aaKnown RBP21.5■■□□□ 1.03
COL4A3BP-203ENST00000380494 PHF14O94880 888 aa21.5■■□□□ 1.03
COL4A3BP-203ENST00000380494 PHLDB1Q86UU1 1377 aa21.5■■□□□ 1.03
COL4A3BP-203ENST00000380494 ROCK2O75116 1388 aaKnown RBP21.49■■□□□ 1.03
COL4A3BP-203ENST00000380494 SKOR2Q2VWA4 1001 aaPredicted RBP21.48■■□□□ 1.03
COL4A3BP-203ENST00000380494 MORC1Q86VD1 984 aa21.48■■□□□ 1.03
COL4A3BP-203ENST00000380494 TPM4P67936 248 aa21.47■■□□□ 1.03
COL4A3BP-203ENST00000380494 BAZ1AQ9NRL2 1556 aaPredicted RBP21.46■■□□□ 1.03
COL4A3BP-203ENST00000380494 VSIG10Q8N0Z9 540 aa21.46■■□□□ 1.03
COL4A3BP-203ENST00000380494 SOGA1O94964 1423 aa21.45■■□□□ 1.03
COL4A3BP-203ENST00000380494 ZBTB7CA1YPR0 619 aa21.45■■□□□ 1.02
COL4A3BP-203ENST00000380494 C14orf37Q86TY3 774 aa21.45■■□□□ 1.02
COL4A3BP-203ENST00000380494 MFAP1P55081 439 aaKnown RBP21.44■■□□□ 1.02
COL4A3BP-203ENST00000380494 KIAA1211Q6ZU35 1233 aa21.44■■□□□ 1.02
COL4A3BP-203ENST00000380494 NAP1L2Q9ULW6 460 aaPredicted RBP21.44■■□□□ 1.02
COL4A3BP-203ENST00000380494 ARID3AQ99856 593 aa21.44■■□□□ 1.02
COL4A3BP-203ENST00000380494 CENPQQ7L2Z9 268 aaPredicted RBP21.44■■□□□ 1.02
COL4A3BP-203ENST00000380494 PDE4AP27815 886 aa21.43■■□□□ 1.02
COL4A3BP-203ENST00000380494 FAM161AQ3B820 660 aa21.43■■□□□ 1.02
COL4A3BP-203ENST00000380494 POGKQ9P215 609 aa21.43■■□□□ 1.02
COL4A3BP-203ENST00000380494 ITPRIPQ8IWB1 547 aa21.42■■□□□ 1.02
COL4A3BP-203ENST00000380494 GOLGA6L1Q8N7Z2 621 aa21.41■■□□□ 1.02
COL4A3BP-203ENST00000380494 NACADO15069 1562 aa21.41■■□□□ 1.02
COL4A3BP-203ENST00000380494 GOLGA2Q08379 1002 aa21.41■■□□□ 1.02
COL4A3BP-203ENST00000380494 KANK1Q14678 1352 aa21.38■■□□□ 1.01
COL4A3BP-203ENST00000380494 ZBED9Q6R2W3 1325 aa21.38■■□□□ 1.01
COL4A3BP-203ENST00000380494 FMN1Q68DA7 1419 aa21.38■■□□□ 1.01
COL4A3BP-203ENST00000380494 NLRP13Q86W25 1043 aa21.37■■□□□ 1.01
COL4A3BP-203ENST00000380494 KCNH8Q96L42 1107 aa21.36■■□□□ 1.01
COL4A3BP-203ENST00000380494 KIF15Q9NS87 1388 aa21.35■■□□□ 1.01
COL4A3BP-203ENST00000380494 CARMIL1Q5VZK9 1371 aa21.34■■□□□ 1.01
COL4A3BP-203ENST00000380494 ST18O60284 1047 aa21.34■■□□□ 1.01
COL4A3BP-203ENST00000380494 GNL2Q13823 731 aaKnown RBP21.33■■□□□ 1.01
COL4A3BP-203ENST00000380494 CENPJQ9HC77 1338 aaPredicted RBP21.33■■□□□ 1
COL4A3BP-203ENST00000380494 PKNOX2Q96KN3 472 aa21.33■■□□□ 1
COL4A3BP-203ENST00000380494 MPHOSPH9Q99550 1183 aa21.32■■□□□ 1
COL4A3BP-203ENST00000380494 PLPPR3Q6T4P5 718 aa21.32■■□□□ 1
COL4A3BP-203ENST00000380494 EIF3AQ14152 1382 aaKnown RBP21.32■■□□□ 1
COL4A3BP-203ENST00000380494 KANK4Q5T7N3 995 aaPredicted RBP21.31■■□□□ 1
COL4A3BP-203ENST00000380494 MYBBP1AQ9BQG0 1328 aaKnown RBP21.3■■□□□ 1
COL4A3BP-203ENST00000380494 RRP1P56182 461 aaKnown RBP21.3■■□□□ 1
COL4A3BP-203ENST00000380494 PKD2Q13563 968 aa21.29■■□□□ 1
COL4A3BP-203ENST00000380494 DHX57Q6P158 1386 aaKnown RBP21.29■■□□□ 1
COL4A3BP-203ENST00000380494 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.28■■□□□ 1
COL4A3BP-203ENST00000380494 HMMRO75330 724 aa21.27■■□□□ 1
COL4A3BP-203ENST00000380494 TAOK2Q9UL54 1235 aa21.27■■□□□ 1
COL4A3BP-203ENST00000380494 CCDC34Q96HJ3 373 aa21.27■□□□□ 0.99
COL4A3BP-203ENST00000380494 SETQ01105 290 aaPredicted RBP21.26■□□□□ 0.99
COL4A3BP-203ENST00000380494 SMC4Q9NTJ3 1288 aa21.26■□□□□ 0.99
COL4A3BP-203ENST00000380494 RTF1Q92541 710 aaKnown RBP21.26■□□□□ 0.99
COL4A3BP-203ENST00000380494 KIF16BQ96L93 1317 aa21.25■□□□□ 0.99
COL4A3BP-203ENST00000380494 DDX49Q9Y6V7 483 aaKnown RBP21.24■□□□□ 0.99
COL4A3BP-203ENST00000380494 CHMP4AQ9BY43 222 aa21.24■□□□□ 0.99
COL4A3BP-203ENST00000380494 GPATCH3Q96I76 525 aa21.23■□□□□ 0.99
COL4A3BP-203ENST00000380494 CUX2O14529 1486 aa21.23■□□□□ 0.99
COL4A3BP-203ENST00000380494 U2AF1L5P0DN76 240 aaPredicted RBP21.22■□□□□ 0.99
COL4A3BP-203ENST00000380494 U2AF1Q01081 240 aaKnown RBP eCLIP21.22■□□□□ 0.993e-9■■■□□ 19
COL4A3BP-203ENST00000380494 HDGFL2Q7Z4V5 671 aaPredicted RBP21.22■□□□□ 0.99
COL4A3BP-203ENST00000380494 SENP3Q9H4L4 574 aaPredicted RBP21.22■□□□□ 0.99
COL4A3BP-203ENST00000380494 SRPK2P78362 688 aaKnown RBP21.22■□□□□ 0.99
COL4A3BP-203ENST00000380494 NOC3LQ8WTT2 800 aaKnown RBP21.21■□□□□ 0.99
COL4A3BP-203ENST00000380494 A0A0G2JS52 829 aa21.21■□□□□ 0.99
COL4A3BP-203ENST00000380494 APBB1O00213 710 aa21.21■□□□□ 0.99
COL4A3BP-203ENST00000380494 MTERF4Q7Z6M4 381 aaKnown RBP21.2■□□□□ 0.98
COL4A3BP-203ENST00000380494 ATP6V1DQ9Y5K8 247 aa21.2■□□□□ 0.98
COL4A3BP-203ENST00000380494 ZNF771Q7L3S4 317 aaPredicted RBP21.19■□□□□ 0.98
COL4A3BP-203ENST00000380494 MAP7D2Q96T17 732 aa21.18■□□□□ 0.98
COL4A3BP-203ENST00000380494 FOXD4L1Q9NU39 408 aa21.18■□□□□ 0.98
COL4A3BP-203ENST00000380494 CGNL1Q0VF96 1302 aa21.18■□□□□ 0.98
COL4A3BP-203ENST00000380494 EXOC6Q8TAG9 804 aa21.18■□□□□ 0.98
COL4A3BP-203ENST00000380494 EIF4G1Q04637 1599 aaKnown RBP21.18■□□□□ 0.98
COL4A3BP-203ENST00000380494 GPS2Q13227 327 aa21.18■□□□□ 0.98
COL4A3BP-203ENST00000380494 CHMP5Q9NZZ3 219 aa21.18■□□□□ 0.98
COL4A3BP-203ENST00000380494 HDAC5Q9UQL6 1122 aa21.18■□□□□ 0.98
COL4A3BP-203ENST00000380494 ANKRD30AQ9BXX3 1397 aa21.18■□□□□ 0.98
COL4A3BP-203ENST00000380494 PRKRIP1Q9H875 184 aaPredicted RBP21.17■□□□□ 0.98
COL4A3BP-203ENST00000380494 L3MBTL2Q969R5 705 aa21.17■□□□□ 0.98
COL4A3BP-203ENST00000380494 TULP1O00294 542 aaPredicted RBP21.16■□□□□ 0.98
COL4A3BP-203ENST00000380494 FAM43AQ8N2R8 423 aa21.16■□□□□ 0.98
COL4A3BP-203ENST00000380494 ANO8Q9HCE9 1232 aaPredicted RBP21.16■□□□□ 0.98
COL4A3BP-203ENST00000380494 SLC4A3P48751 1232 aa21.16■□□□□ 0.98
COL4A3BP-203ENST00000380494 ABCC8Q09428 1581 aa21.16■□□□□ 0.98
COL4A3BP-203ENST00000380494 KIF3AQ9Y496 699 aa21.15■□□□□ 0.98
COL4A3BP-203ENST00000380494 CCDC88BA6NC98 1476 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms