RNA–Protein interactions for RNA: ENST00000380491.7

C12orf54-202, Transcript of chromosome 12 open reading frame 54, humanhuman

TSL 1 (best)

Gene C12orf54, Length 820 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf54-202ENST00000380491 SUPT6HQ7KZ85 1726 aaKnown RBP15.78■□□□□ 0.12
C12orf54-202ENST00000380491 CDC42BPBQ9Y5S2 1711 aa15.78■□□□□ 0.12
C12orf54-202ENST00000380491 KDM6BO15054 1643 aa15.78■□□□□ 0.12
C12orf54-202ENST00000380491 COL17A1Q9UMD9 1497 aaPredicted RBP15.78■□□□□ 0.12
C12orf54-202ENST00000380491 PREX2Q70Z35 1606 aa15.77■□□□□ 0.12
C12orf54-202ENST00000380491 GPATCH8Q9UKJ3 1502 aaKnown RBP15.77■□□□□ 0.11
C12orf54-202ENST00000380491 NCOA2Q15596 1464 aa15.77■□□□□ 0.11
C12orf54-202ENST00000380491 CFAP74Q9C0B2 1584 aa15.76■□□□□ 0.11
C12orf54-202ENST00000380491 ARHGAP5Q13017 1502 aa15.75■□□□□ 0.11
C12orf54-202ENST00000380491 EFCAB2Q5VUJ9 269 aa15.75■□□□□ 0.11
C12orf54-202ENST00000380491 AKNAQ7Z591 1439 aa15.75■□□□□ 0.11
C12orf54-202ENST00000380491 CCNB3Q8WWL7 1395 aa15.75■□□□□ 0.11
C12orf54-202ENST00000380491 PPP6R1Q9UPN7 881 aa15.72■□□□□ 0.11
C12orf54-202ENST00000380491 ITSN2Q9NZM3 1697 aa15.71■□□□□ 0.11
C12orf54-202ENST00000380491 ADRA2BP18089 450 aa15.71■□□□□ 0.11
C12orf54-202ENST00000380491 CFDP1Q9UEE9 299 aaPredicted RBP15.7■□□□□ 0.1
C12orf54-202ENST00000380491 ADGRL1O94910 1474 aa15.7■□□□□ 0.1
C12orf54-202ENST00000380491 SCAPERQ9BY12 1400 aa15.68■□□□□ 0.1
C12orf54-202ENST00000380491 SAMD9LQ8IVG5 1584 aa15.67■□□□□ 0.1
C12orf54-202ENST00000380491 DENND4BO75064 1496 aaPredicted RBP15.67■□□□□ 0.1
C12orf54-202ENST00000380491 RAPGEF3O95398 923 aa15.67■□□□□ 0.1
C12orf54-202ENST00000380491 PIAS4Q8N2W9 510 aaPredicted RBP15.67■□□□□ 0.1
C12orf54-202ENST00000380491 ZNF777Q9ULD5 760 aaPredicted RBP15.67■□□□□ 0.1
C12orf54-202ENST00000380491 RICTORQ6R327 1708 aa15.66■□□□□ 0.1
C12orf54-202ENST00000380491 ABCC1P33527 1531 aa15.66■□□□□ 0.1
C12orf54-202ENST00000380491 FRMPD1Q5SYB0 1578 aa15.66■□□□□ 0.1
C12orf54-202ENST00000380491 MYOM3Q5VTT5 1437 aa15.65■□□□□ 0.1
C12orf54-202ENST00000380491 ARHGEF12Q9NZN5 1544 aa15.64■□□□□ 0.09
C12orf54-202ENST00000380491 ZNF644Q9H582 1327 aaPredicted RBP15.64■□□□□ 0.09
C12orf54-202ENST00000380491 POGZQ7Z3K3 1410 aa15.63■□□□□ 0.09
C12orf54-202ENST00000380491 KIAA1107Q9UPP5 1409 aa15.63■□□□□ 0.09
C12orf54-202ENST00000380491 PPARGC1BQ86YN6 1023 aaKnown RBP15.63■□□□□ 0.09
C12orf54-202ENST00000380491 PLEKHH2Q8IVE3 1493 aa15.63■□□□□ 0.09
C12orf54-202ENST00000380491 MIA2Q96PC5 1412 aa15.62■□□□□ 0.09
C12orf54-202ENST00000380491 MSH5O43196 834 aa15.62■□□□□ 0.09
C12orf54-202ENST00000380491 AFAP1Q8N556 730 aa15.61■□□□□ 0.09
C12orf54-202ENST00000380491 SYCP2Q9BX26 1530 aa15.61■□□□□ 0.09
C12orf54-202ENST00000380491 TRAPPC8Q9Y2L5 1435 aa15.6■□□□□ 0.09
C12orf54-202ENST00000380491 ZNF518AQ6AHZ1 1483 aa15.6■□□□□ 0.09
C12orf54-202ENST00000380491 ZMYM4Q5VZL5 1548 aa15.6■□□□□ 0.09
C12orf54-202ENST00000380491 HNRNPMP52272 730 aaKnown RBP eCLIP15.6■□□□□ 0.09
C12orf54-202ENST00000380491 CAMSAP2Q08AD1 1489 aa15.59■□□□□ 0.09
C12orf54-202ENST00000380491 MBD5Q9P267 1494 aa15.59■□□□□ 0.09
C12orf54-202ENST00000380491 KDM5CP41229 1560 aa15.58■□□□□ 0.09
C12orf54-202ENST00000380491 FGD6Q6ZV73 1430 aa15.58■□□□□ 0.08
C12orf54-202ENST00000380491 MAGI2Q86UL8 1455 aa15.57■□□□□ 0.08
C12orf54-202ENST00000380491 PTPN23Q9H3S7 1636 aa15.56■□□□□ 0.08
C12orf54-202ENST00000380491 ARHGEF5Q12774 1597 aa15.54■□□□□ 0.08
C12orf54-202ENST00000380491 TCOF1Q13428 1488 aaKnown RBP15.54■□□□□ 0.08
C12orf54-202ENST00000380491 MLH3Q9UHC1 1453 aa15.54■□□□□ 0.08
C12orf54-202ENST00000380491 RSPH4AQ5TD94 716 aa15.54■□□□□ 0.08
C12orf54-202ENST00000380491 HECW2Q9P2P5 1572 aa15.53■□□□□ 0.08
C12orf54-202ENST00000380491 YEATS2Q9ULM3 1422 aa15.53■□□□□ 0.08
C12orf54-202ENST00000380491 ZFYVE16Q7Z3T8 1539 aa15.53■□□□□ 0.08
C12orf54-202ENST00000380491 ARHGEF40Q8TER5 1519 aa15.52■□□□□ 0.07
C12orf54-202ENST00000380491 CCDC141Q6ZP82 1450 aa15.52■□□□□ 0.07
C12orf54-202ENST00000380491 SPAG9O60271 1321 aaKnown RBP15.51■□□□□ 0.07
C12orf54-202ENST00000380491 KIDINS220Q9ULH0 1771 aa15.51■□□□□ 0.07
C12orf54-202ENST00000380491 INO80Q9ULG1 1556 aaPredicted RBP15.49■□□□□ 0.07
C12orf54-202ENST00000380491 MYT1LQ9UL68 1186 aa15.49■□□□□ 0.07
C12orf54-202ENST00000380491 ATP7AQ04656 1500 aa15.48■□□□□ 0.07
C12orf54-202ENST00000380491 ATP10AO60312 1499 aa15.48■□□□□ 0.07
C12orf54-202ENST00000380491 ABCA6Q8N139 1617 aa15.48■□□□□ 0.07
C12orf54-202ENST00000380491 DIP2CQ9Y2E4 1556 aa15.48■□□□□ 0.07
C12orf54-202ENST00000380491 RTEL1-TNFRSF6BF6WH68 1400 aa15.47■□□□□ 0.07
C12orf54-202ENST00000380491 FAM50AQ14320 339 aaKnown RBP15.47■□□□□ 0.07
C12orf54-202ENST00000380491 DNMT1P26358 1616 aaKnown RBP15.46■□□□□ 0.07
C12orf54-202ENST00000380491 ABCC5O15440 1437 aa15.46■□□□□ 0.07
C12orf54-202ENST00000380491 TSPY4P0CV99 314 aa15.46■□□□□ 0.07
C12orf54-202ENST00000380491 TSPY10P0CW01 314 aa15.46■□□□□ 0.07
C12orf54-202ENST00000380491 C9orf84Q5VXU9 1444 aa15.45■□□□□ 0.06
C12orf54-202ENST00000380491 SIGLEC1Q9BZZ2 1709 aa15.45■□□□□ 0.06
C12orf54-202ENST00000380491 MAST1Q9Y2H9 1570 aa15.45■□□□□ 0.06
C12orf54-202ENST00000380491 CROCC2H7BZ55 1655 aa15.44■□□□□ 0.06
C12orf54-202ENST00000380491 DAPK1P53355 1430 aa15.44■□□□□ 0.06
C12orf54-202ENST00000380491 RRBP1Q9P2E9 1410 aaKnown RBP15.44■□□□□ 0.06
C12orf54-202ENST00000380491 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.44■□□□□ 0.06
C12orf54-202ENST00000380491 REREQ9P2R6 1566 aa15.44■□□□□ 0.06
C12orf54-202ENST00000380491 SHANK2Q9UPX8 1470 aa15.42■□□□□ 0.06
C12orf54-202ENST00000380491 ADGBQ8N7X0 1667 aa15.41■□□□□ 0.06
C12orf54-202ENST00000380491 ARID4BQ4LE39 1312 aaPredicted RBP15.4■□□□□ 0.06
C12orf54-202ENST00000380491 A2MP01023 1474 aa15.4■□□□□ 0.06
C12orf54-202ENST00000380491 AGLP35573 1532 aa15.38■□□□□ 0.05
C12orf54-202ENST00000380491 PLXNC1O60486 1568 aa15.38■□□□□ 0.05
C12orf54-202ENST00000380491 PTPRKQ15262 1439 aa15.38■□□□□ 0.05
C12orf54-202ENST00000380491 KDM4FA0A1W2PPD8 638 aa15.38■□□□□ 0.05
C12orf54-202ENST00000380491 DHX29Q7Z478 1369 aaKnown RBP15.37■□□□□ 0.05
C12orf54-202ENST00000380491 BCORL1Q5H9F3 1711 aa15.37■□□□□ 0.05
C12orf54-202ENST00000380491 CHIC2Q9UKJ5 165 aa15.37■□□□□ 0.05
C12orf54-202ENST00000380491 NCOA1Q15788 1441 aa15.35■□□□□ 0.05
C12orf54-202ENST00000380491 ADGRL2O95490 1459 aa15.35■□□□□ 0.05
C12orf54-202ENST00000380491 ANKRD30AQ9BXX3 1397 aa15.35■□□□□ 0.05
C12orf54-202ENST00000380491 ADAMTSL3P82987 1691 aa15.35■□□□□ 0.05
C12orf54-202ENST00000380491 ITGAEP38570 1179 aa15.34■□□□□ 0.05
C12orf54-202ENST00000380491 ILDR1Q86SU0 546 aaPredicted RBP15.34■□□□□ 0.05
C12orf54-202ENST00000380491 RRP7BPQ9NSQ0 103 aa15.34■□□□□ 0.05
C12orf54-202ENST00000380491 KIF15Q9NS87 1388 aa15.34■□□□□ 0.05
C12orf54-202ENST00000380491 MLECQ14165 292 aa15.33■□□□□ 0.04
C12orf54-202ENST00000380491 DUOX2Q9NRD8 1548 aa15.33■□□□□ 0.04
C12orf54-202ENST00000380491 ROCK1Q13464 1354 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms