RNA–Protein interactions for RNA: ENST00000380249.5

FOCAD-202, Transcript of focadhesin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOCAD, Length 6,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-202ENST00000380249 AKNAQ7Z591 1439 aa9.51□□□□□ -0.89
FOCAD-202ENST00000380249 ACIN1Q9UKV3 1341 aaKnown RBP9.51□□□□□ -0.89
FOCAD-202ENST00000380249 TSPY4P0CV99 314 aa9.51□□□□□ -0.89
FOCAD-202ENST00000380249 TSPY10P0CW01 314 aa9.51□□□□□ -0.89
FOCAD-202ENST00000380249 DENND4BO75064 1496 aaPredicted RBP9.5□□□□□ -0.89
FOCAD-202ENST00000380249 ARHGAP5Q13017 1502 aa9.49□□□□□ -0.89
FOCAD-202ENST00000380249 CFAP74Q9C0B2 1584 aa9.49□□□□□ -0.89
FOCAD-202ENST00000380249 SCAPERQ9BY12 1400 aa9.49□□□□□ -0.89
FOCAD-202ENST00000380249 ADGRL1O94910 1474 aa9.49□□□□□ -0.89
FOCAD-202ENST00000380249 ITSN2Q9NZM3 1697 aa9.48□□□□□ -0.89
FOCAD-202ENST00000380249 MAGI2Q86UL8 1455 aa9.48□□□□□ -0.89
FOCAD-202ENST00000380249 MAP3K4Q9Y6R4 1608 aa9.48□□□□□ -0.89
FOCAD-202ENST00000380249 ZNF777Q9ULD5 760 aaPredicted RBP9.48□□□□□ -0.89
FOCAD-202ENST00000380249 TTC37Q6PGP7 1564 aa9.48□□□□□ -0.89
FOCAD-202ENST00000380249 RRBP1Q9P2E9 1410 aaKnown RBP9.47□□□□□ -0.89
FOCAD-202ENST00000380249 TCOF1Q13428 1488 aaKnown RBP9.47□□□□□ -0.89
FOCAD-202ENST00000380249 ZNF518AQ6AHZ1 1483 aa9.47□□□□□ -0.89
FOCAD-202ENST00000380249 LRRIQ1Q96JM4 1722 aa9.46□□□□□ -0.89
FOCAD-202ENST00000380249 PREX2Q70Z35 1606 aa9.46□□□□□ -0.89
FOCAD-202ENST00000380249 MYO5CQ9NQX4 1742 aa9.46□□□□□ -0.9
FOCAD-202ENST00000380249 RTEL1-TNFRSF6BF6WH68 1400 aa9.45□□□□□ -0.9
FOCAD-202ENST00000380249 POGZQ7Z3K3 1410 aa9.45□□□□□ -0.9
FOCAD-202ENST00000380249 SPAG9O60271 1321 aaKnown RBP9.45□□□□□ -0.9
FOCAD-202ENST00000380249 CCDC141Q6ZP82 1450 aa9.45□□□□□ -0.9
FOCAD-202ENST00000380249 MLH3Q9UHC1 1453 aa9.44□□□□□ -0.9
FOCAD-202ENST00000380249 MBD5Q9P267 1494 aa9.44□□□□□ -0.9
FOCAD-202ENST00000380249 KIF13AQ9H1H9 1805 aa9.44□□□□□ -0.9
FOCAD-202ENST00000380249 SHANK2Q9UPX8 1470 aa9.43□□□□□ -0.9
FOCAD-202ENST00000380249 ABCC1P33527 1531 aa9.43□□□□□ -0.9
FOCAD-202ENST00000380249 CAMSAP2Q08AD1 1489 aa9.43□□□□□ -0.9
FOCAD-202ENST00000380249 FAM50AQ14320 339 aaKnown RBP9.43□□□□□ -0.9
FOCAD-202ENST00000380249 ARHGEF5Q12774 1597 aa9.42□□□□□ -0.9
FOCAD-202ENST00000380249 ANKRD30AQ9BXX3 1397 aa9.42□□□□□ -0.9
FOCAD-202ENST00000380249 AFAP1Q8N556 730 aa9.41□□□□□ -0.9
FOCAD-202ENST00000380249 ROCK1Q13464 1354 aa9.41□□□□□ -0.9
FOCAD-202ENST00000380249 CDC42BPAQ5VT25 1732 aa9.41□□□□□ -0.9
FOCAD-202ENST00000380249 ZNF644Q9H582 1327 aaPredicted RBP9.41□□□□□ -0.9
FOCAD-202ENST00000380249 HNRNPMP52272 730 aaKnown RBP eCLIP9.4□□□□□ -0.91e-6■■■■□ 19.4
FOCAD-202ENST00000380249 ZMYM4Q5VZL5 1548 aa9.4□□□□□ -0.91
FOCAD-202ENST00000380249 RAPGEF3O95398 923 aa9.4□□□□□ -0.91
FOCAD-202ENST00000380249 TRAPPC8Q9Y2L5 1435 aa9.39□□□□□ -0.91
FOCAD-202ENST00000380249 KDM5CP41229 1560 aa9.39□□□□□ -0.91
FOCAD-202ENST00000380249 COL17A1Q9UMD9 1497 aaPredicted RBP9.39□□□□□ -0.91
FOCAD-202ENST00000380249 KDM6BO15054 1643 aa9.39□□□□□ -0.91
FOCAD-202ENST00000380249 PTPN23Q9H3S7 1636 aa9.39□□□□□ -0.91
FOCAD-202ENST00000380249 MYT1LQ9UL68 1186 aa9.39□□□□□ -0.91
FOCAD-202ENST00000380249 PPP6R1Q9UPN7 881 aa9.39□□□□□ -0.91
FOCAD-202ENST00000380249 SYCP2Q9BX26 1530 aa9.38□□□□□ -0.91
FOCAD-202ENST00000380249 DAPK1P53355 1430 aa9.38□□□□□ -0.91
FOCAD-202ENST00000380249 TRIM26Q12899 539 aaPredicted RBP9.38□□□□□ -0.91
FOCAD-202ENST00000380249 PPARGC1BQ86YN6 1023 aaKnown RBP9.38□□□□□ -0.91
FOCAD-202ENST00000380249 SAMD9LQ8IVG5 1584 aa9.38□□□□□ -0.91
FOCAD-202ENST00000380249 ABCC5O15440 1437 aa9.38□□□□□ -0.91
FOCAD-202ENST00000380249 CDC42BPBQ9Y5S2 1711 aa9.38□□□□□ -0.91
FOCAD-202ENST00000380249 C9orf84Q5VXU9 1444 aa9.38□□□□□ -0.91
FOCAD-202ENST00000380249 ARHGEF12Q9NZN5 1544 aa9.37□□□□□ -0.91
FOCAD-202ENST00000380249 ADGRL2O95490 1459 aa9.37□□□□□ -0.91
FOCAD-202ENST00000380249 PPRC1Q5VV67 1664 aaKnown RBP9.37□□□□□ -0.91
FOCAD-202ENST00000380249 HRCP23327 699 aa9.37□□□□□ -0.91
FOCAD-202ENST00000380249 NCOA1Q15788 1441 aa9.36□□□□□ -0.91
FOCAD-202ENST00000380249 DHX29Q7Z478 1369 aaKnown RBP9.36□□□□□ -0.91
FOCAD-202ENST00000380249 MAST1Q9Y2H9 1570 aa9.36□□□□□ -0.91
FOCAD-202ENST00000380249 ATP10AO60312 1499 aa9.36□□□□□ -0.91
FOCAD-202ENST00000380249 DNMT1P26358 1616 aaKnown RBP9.35□□□□□ -0.91
FOCAD-202ENST00000380249 KIF15Q9NS87 1388 aa9.35□□□□□ -0.91
FOCAD-202ENST00000380249 AGLP35573 1532 aa9.34□□□□□ -0.91
FOCAD-202ENST00000380249 ATP7AQ04656 1500 aa9.34□□□□□ -0.91
FOCAD-202ENST00000380249 ZFYVE16Q7Z3T8 1539 aa9.34□□□□□ -0.91
FOCAD-202ENST00000380249 REREQ9P2R6 1566 aa9.34□□□□□ -0.91
FOCAD-202ENST00000380249 HFM1A2PYH4 1435 aa9.33□□□□□ -0.92
FOCAD-202ENST00000380249 A2MP01023 1474 aa9.33□□□□□ -0.92
FOCAD-202ENST00000380249 HECW2Q9P2P5 1572 aa9.33□□□□□ -0.92
FOCAD-202ENST00000380249 ANKRD50Q9ULJ7 1429 aa9.32□□□□□ -0.92
FOCAD-202ENST00000380249 TSPOAP1O95153 1857 aa9.32□□□□□ -0.92
FOCAD-202ENST00000380249 FAM135AQ9P2D6 1515 aa9.32□□□□□ -0.92
FOCAD-202ENST00000380249 ARHGEF40Q8TER5 1519 aa9.32□□□□□ -0.92
FOCAD-202ENST00000380249 ERBINQ96RT1 1412 aa9.31□□□□□ -0.92
FOCAD-202ENST00000380249 PLXNC1O60486 1568 aa9.31□□□□□ -0.92
FOCAD-202ENST00000380249 DUOX2Q9NRD8 1548 aa9.31□□□□□ -0.92
FOCAD-202ENST00000380249 INO80Q9ULG1 1556 aaPredicted RBP9.31□□□□□ -0.92
FOCAD-202ENST00000380249 ITGAEP38570 1179 aa9.3□□□□□ -0.92
FOCAD-202ENST00000380249 CHIC2Q9UKJ5 165 aa9.3□□□□□ -0.92
FOCAD-202ENST00000380249 RICTORQ6R327 1708 aa9.3□□□□□ -0.92
FOCAD-202ENST00000380249 YEATS2Q9ULM3 1422 aa9.3□□□□□ -0.92
FOCAD-202ENST00000380249 ESF1Q9H501 851 aaKnown RBP9.29□□□□□ -0.92
FOCAD-202ENST00000380249 KANK1Q14678 1352 aa9.29□□□□□ -0.92
FOCAD-202ENST00000380249 FRMPD1Q5SYB0 1578 aa9.29□□□□□ -0.92
FOCAD-202ENST00000380249 CNTLNQ9NXG0 1405 aa9.29□□□□□ -0.92
FOCAD-202ENST00000380249 KIF3BO15066 747 aa9.28□□□□□ -0.92
FOCAD-202ENST00000380249 NAIPQ13075 1403 aa9.28□□□□□ -0.92
FOCAD-202ENST00000380249 PTPRKQ15262 1439 aa9.28□□□□□ -0.92
FOCAD-202ENST00000380249 DIP2CQ9Y2E4 1556 aa9.27□□□□□ -0.92
FOCAD-202ENST00000380249 RRP7BPQ9NSQ0 103 aa9.27□□□□□ -0.92
FOCAD-202ENST00000380249 SETD5Q9C0A6 1442 aa9.27□□□□□ -0.93
FOCAD-202ENST00000380249 ARID4BQ4LE39 1312 aaPredicted RBP9.27□□□□□ -0.93
FOCAD-202ENST00000380249 KIDINS220Q9ULH0 1771 aa9.26□□□□□ -0.93
FOCAD-202ENST00000380249 ADGBQ8N7X0 1667 aa9.24□□□□□ -0.93
FOCAD-202ENST00000380249 EIF2AK4Q9P2K8 1649 aaKnown RBP9.24□□□□□ -0.93
FOCAD-202ENST00000380249 GGT6Q6P531 493 aa9.23□□□□□ -0.93
FOCAD-202ENST00000380249 KDM5DQ9BY66 1539 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms