RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 ZNF644Q9H582 1327 aaPredicted RBP7.53□□□□□ -1.2
C9orf72-203ENST00000380003 HNRNPMP52272 730 aaKnown RBP eCLIP7.53□□□□□ -1.2
C9orf72-203ENST00000380003 LRRIQ1Q96JM4 1722 aa7.53□□□□□ -1.2
C9orf72-203ENST00000380003 DENND4BO75064 1496 aaPredicted RBP7.53□□□□□ -1.2
C9orf72-203ENST00000380003 FRMPD1Q5SYB0 1578 aa7.52□□□□□ -1.2
C9orf72-203ENST00000380003 EFCAB2Q5VUJ9 269 aa7.52□□□□□ -1.21
C9orf72-203ENST00000380003 PCF11O94913 1555 aaKnown RBP7.52□□□□□ -1.21
C9orf72-203ENST00000380003 HECW2Q9P2P5 1572 aa7.52□□□□□ -1.21
C9orf72-203ENST00000380003 SIGLEC1Q9BZZ2 1709 aa7.51□□□□□ -1.21
C9orf72-203ENST00000380003 PLCH2O75038 1416 aa7.51□□□□□ -1.21
C9orf72-203ENST00000380003 ARHGAP5Q13017 1502 aa7.51□□□□□ -1.21
C9orf72-203ENST00000380003 NEO1Q92859 1461 aa7.5□□□□□ -1.21
C9orf72-203ENST00000380003 PTPRMP28827 1452 aa7.5□□□□□ -1.21
C9orf72-203ENST00000380003 TROQ12816 1431 aaPredicted RBP7.49□□□□□ -1.21
C9orf72-203ENST00000380003 HECW1Q76N89 1606 aa7.49□□□□□ -1.21
C9orf72-203ENST00000380003 TRAPPC8Q9Y2L5 1435 aa7.49□□□□□ -1.21
C9orf72-203ENST00000380003 MADDQ8WXG6 1647 aa7.49□□□□□ -1.21
C9orf72-203ENST00000380003 ARHGEF12Q9NZN5 1544 aa7.48□□□□□ -1.21
C9orf72-203ENST00000380003 CFDP1Q9UEE9 299 aaPredicted RBP7.48□□□□□ -1.21
C9orf72-203ENST00000380003 CEP162Q5TB80 1403 aa7.47□□□□□ -1.21
C9orf72-203ENST00000380003 RICTORQ6R327 1708 aa7.47□□□□□ -1.21
C9orf72-203ENST00000380003 POGZQ7Z3K3 1410 aa7.47□□□□□ -1.21
C9orf72-203ENST00000380003 CASKIN1Q8WXD9 1431 aa7.47□□□□□ -1.21
C9orf72-203ENST00000380003 PPARGC1BQ86YN6 1023 aaKnown RBP7.47□□□□□ -1.21
C9orf72-203ENST00000380003 MTUS2Q5JR59 1369 aa7.46□□□□□ -1.21
C9orf72-203ENST00000380003 KANK4Q5T7N3 995 aaPredicted RBP7.46□□□□□ -1.22
C9orf72-203ENST00000380003 GGT6Q6P531 493 aa7.46□□□□□ -1.22
C9orf72-203ENST00000380003 PHLDB1Q86UU1 1377 aa7.46□□□□□ -1.22
C9orf72-203ENST00000380003 ZFYVE16Q7Z3T8 1539 aa7.45□□□□□ -1.22
C9orf72-203ENST00000380003 RIMS1Q86UR5 1692 aaKnown RBP7.45□□□□□ -1.22
C9orf72-203ENST00000380003 MYO5CQ9NQX4 1742 aa7.44□□□□□ -1.22
C9orf72-203ENST00000380003 CDC42BPBQ9Y5S2 1711 aa7.44□□□□□ -1.22
C9orf72-203ENST00000380003 BCORL1Q5H9F3 1711 aa7.43□□□□□ -1.22
C9orf72-203ENST00000380003 ARHGEF40Q8TER5 1519 aa7.43□□□□□ -1.22
C9orf72-203ENST00000380003 ADAMTSL3P82987 1691 aa7.43□□□□□ -1.22
C9orf72-203ENST00000380003 CCNB3Q8WWL7 1395 aa7.43□□□□□ -1.22
C9orf72-203ENST00000380003 ESF1Q9H501 851 aaKnown RBP7.43□□□□□ -1.22
C9orf72-203ENST00000380003 GPATCH8Q9UKJ3 1502 aaKnown RBP7.43□□□□□ -1.22
C9orf72-203ENST00000380003 ZNF518AQ6AHZ1 1483 aa7.42□□□□□ -1.22
C9orf72-203ENST00000380003 LMTK3Q96Q04 1460 aa7.42□□□□□ -1.22
C9orf72-203ENST00000380003 SPAG9O60271 1321 aaKnown RBP7.42□□□□□ -1.22
C9orf72-203ENST00000380003 SYCP2Q9BX26 1530 aa7.42□□□□□ -1.22
C9orf72-203ENST00000380003 ATP10AO60312 1499 aa7.42□□□□□ -1.22
C9orf72-203ENST00000380003 FYCO1Q9BQS8 1478 aa7.42□□□□□ -1.22
C9orf72-203ENST00000380003 CCDC18Q5T9S5 1454 aa7.41□□□□□ -1.22
C9orf72-203ENST00000380003 CDC42BPAQ5VT25 1732 aa7.4□□□□□ -1.22
C9orf72-203ENST00000380003 C9orf84Q5VXU9 1444 aa7.4□□□□□ -1.23
C9orf72-203ENST00000380003 SAMD9LQ8IVG5 1584 aa7.4□□□□□ -1.23
C9orf72-203ENST00000380003 ABCA6Q8N139 1617 aa7.39□□□□□ -1.23
C9orf72-203ENST00000380003 ZMYM4Q5VZL5 1548 aa7.39□□□□□ -1.23
C9orf72-203ENST00000380003 FBXO31Q5XUX0 539 aaPredicted RBP7.39□□□□□ -1.23
C9orf72-203ENST00000380003 ABCC1P33527 1531 aa7.39□□□□□ -1.23
C9orf72-203ENST00000380003 CFAP74Q9C0B2 1584 aa7.39□□□□□ -1.23
C9orf72-203ENST00000380003 PREX2Q70Z35 1606 aa7.38□□□□□ -1.23
C9orf72-203ENST00000380003 KIF3BO15066 747 aa7.38□□□□□ -1.23
C9orf72-203ENST00000380003 DIP2CQ9Y2E4 1556 aa7.38□□□□□ -1.23
C9orf72-203ENST00000380003 CHIC2Q9UKJ5 165 aa7.38□□□□□ -1.23
C9orf72-203ENST00000380003 FER1L4A9Z1Z3 1794 aa7.38□□□□□ -1.23
C9orf72-203ENST00000380003 MAGI2Q86UL8 1455 aa7.37□□□□□ -1.23
C9orf72-203ENST00000380003 KIDINS220Q9ULH0 1771 aa7.37□□□□□ -1.23
C9orf72-203ENST00000380003 KDM5CP41229 1560 aa7.36□□□□□ -1.23
C9orf72-203ENST00000380003 SUPT6HQ7KZ85 1726 aaKnown RBP7.36□□□□□ -1.23
C9orf72-203ENST00000380003 NCOA2Q15596 1464 aa7.36□□□□□ -1.23
C9orf72-203ENST00000380003 MLH3Q9UHC1 1453 aa7.35□□□□□ -1.23
C9orf72-203ENST00000380003 SRCAPQ6ZRS2 3230 aa7.35□□□□□ -1.23
C9orf72-203ENST00000380003 NCKAP5LQ9HCH0 1330 aa7.35□□□□□ -1.23
C9orf72-203ENST00000380003 TIAM1Q13009 1591 aa7.35□□□□□ -1.23
C9orf72-203ENST00000380003 ZMYM3Q14202 1370 aa7.35□□□□□ -1.23
C9orf72-203ENST00000380003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.35□□□□□ -1.23
C9orf72-203ENST00000380003 RRP7BPQ9NSQ0 103 aa7.35□□□□□ -1.23
C9orf72-203ENST00000380003 ITSN2Q9NZM3 1697 aa7.34□□□□□ -1.23
C9orf72-203ENST00000380003 APLP2Q06481 763 aa7.34□□□□□ -1.23
C9orf72-203ENST00000380003 VPS8Q8N3P4 1428 aa7.34□□□□□ -1.23
C9orf72-203ENST00000380003 ITGAEP38570 1179 aa7.34□□□□□ -1.23
C9orf72-203ENST00000380003 MBD5Q9P267 1494 aa7.34□□□□□ -1.23
C9orf72-203ENST00000380003 TSPY4P0CV99 314 aa7.33□□□□□ -1.24
C9orf72-203ENST00000380003 TSPY10P0CW01 314 aa7.33□□□□□ -1.24
C9orf72-203ENST00000380003 ATP7AQ04656 1500 aa7.33□□□□□ -1.24
C9orf72-203ENST00000380003 WASHC2CQ9Y4E1 1318 aa7.33□□□□□ -1.24
C9orf72-203ENST00000380003 A2MP01023 1474 aa7.32□□□□□ -1.24
C9orf72-203ENST00000380003 UHRF1BP1Q6BDS2 1440 aa7.32□□□□□ -1.24
C9orf72-203ENST00000380003 CACNB1Q02641 598 aaPredicted RBP7.32□□□□□ -1.24
C9orf72-203ENST00000380003 CAMSAP2Q08AD1 1489 aa7.32□□□□□ -1.24
C9orf72-203ENST00000380003 LRRC9Q6ZRR7 1453 aa7.32□□□□□ -1.24
C9orf72-203ENST00000380003 FAM50AQ14320 339 aaKnown RBP7.32□□□□□ -1.24
C9orf72-203ENST00000380003 FBXO41Q8TF61 875 aa7.32□□□□□ -1.24
C9orf72-203ENST00000380003 CERKQ8TCT0 537 aa7.31□□□□□ -1.24
C9orf72-203ENST00000380003 C3P01024 1663 aa7.31□□□□□ -1.24
C9orf72-203ENST00000380003 ZNF335Q9H4Z2 1342 aaPredicted RBP7.31□□□□□ -1.24
C9orf72-203ENST00000380003 EHBP1L1Q8N3D4 1523 aa7.31□□□□□ -1.24
C9orf72-203ENST00000380003 DMRT2Q9Y5R5 561 aa7.3□□□□□ -1.24
C9orf72-203ENST00000380003 KIAA1107Q9UPP5 1409 aa7.3□□□□□ -1.24
C9orf72-203ENST00000380003 CLTCQ00610 1675 aaKnown RBP7.29□□□□□ -1.24
C9orf72-203ENST00000380003 CFAP65Q6ZU64 1925 aaKnown RBP7.29□□□□□ -1.24
C9orf72-203ENST00000380003 SCAF1Q9H7N4 1312 aaKnown RBP7.29□□□□□ -1.24
C9orf72-203ENST00000380003 STRCQ7RTU9 1775 aa7.28□□□□□ -1.24
C9orf72-203ENST00000380003 DHX29Q7Z478 1369 aaKnown RBP7.28□□□□□ -1.24
C9orf72-203ENST00000380003 RBM33Q96EV2 1170 aaKnown RBP7.28□□□□□ -1.24
C9orf72-203ENST00000380003 INO80Q9ULG1 1556 aaPredicted RBP7.28□□□□□ -1.24
C9orf72-203ENST00000380003 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms