RNA–Protein interactions for RNA: ENST00000379995.1

C9orf72-201, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 3

Gene C9orf72, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-201ENST00000379995 HECW1Q76N89 1606 aa15.53■□□□□ 0.08
C9orf72-201ENST00000379995 TROQ12816 1431 aaPredicted RBP15.52■□□□□ 0.08
C9orf72-201ENST00000379995 CFAP74Q9C0B2 1584 aa15.52■□□□□ 0.07
C9orf72-201ENST00000379995 MAGI2Q86UL8 1455 aa15.52■□□□□ 0.07
C9orf72-201ENST00000379995 POGZQ7Z3K3 1410 aa15.51■□□□□ 0.07
C9orf72-201ENST00000379995 MLECQ14165 292 aa15.51■□□□□ 0.07
C9orf72-201ENST00000379995 ZMYM4Q5VZL5 1548 aa15.51■□□□□ 0.07
C9orf72-201ENST00000379995 ZFYVE16Q7Z3T8 1539 aa15.5■□□□□ 0.07
C9orf72-201ENST00000379995 BCORL1Q5H9F3 1711 aa15.49■□□□□ 0.07
C9orf72-201ENST00000379995 RICTORQ6R327 1708 aa15.49■□□□□ 0.07
C9orf72-201ENST00000379995 CLIP1P30622 1438 aa15.49■□□□□ 0.07
C9orf72-201ENST00000379995 MADDQ8WXG6 1647 aa15.48■□□□□ 0.07
C9orf72-201ENST00000379995 AFAP1Q8N556 730 aa15.47■□□□□ 0.07
C9orf72-201ENST00000379995 CASKIN1Q8WXD9 1431 aa15.46■□□□□ 0.07
C9orf72-201ENST00000379995 KIF14Q15058 1648 aa15.45■□□□□ 0.06
C9orf72-201ENST00000379995 ATP10AO60312 1499 aa15.45■□□□□ 0.06
C9orf72-201ENST00000379995 ARHGAP5Q13017 1502 aa15.43■□□□□ 0.06
C9orf72-201ENST00000379995 MYT1LQ9UL68 1186 aa15.43■□□□□ 0.06
C9orf72-201ENST00000379995 LMTK3Q96Q04 1460 aa15.43■□□□□ 0.06
C9orf72-201ENST00000379995 C9orf84Q5VXU9 1444 aa15.43■□□□□ 0.06
C9orf72-201ENST00000379995 PCF11O94913 1555 aaKnown RBP15.42■□□□□ 0.06
C9orf72-201ENST00000379995 ZNF518AQ6AHZ1 1483 aa15.42■□□□□ 0.06
C9orf72-201ENST00000379995 HSPA2P54652 639 aa15.42■□□□□ 0.06
C9orf72-201ENST00000379995 CCDC18Q5T9S5 1454 aa15.41■□□□□ 0.06
C9orf72-201ENST00000379995 RIMS1Q86UR5 1692 aaKnown RBP15.39■□□□□ 0.05
C9orf72-201ENST00000379995 SIGLEC1Q9BZZ2 1709 aa15.38■□□□□ 0.05
C9orf72-201ENST00000379995 MYO5CQ9NQX4 1742 aa15.37■□□□□ 0.05
C9orf72-201ENST00000379995 TRAPPC8Q9Y2L5 1435 aa15.37■□□□□ 0.05
C9orf72-201ENST00000379995 CEBPAP49715 358 aaPredicted RBP15.37■□□□□ 0.05
C9orf72-201ENST00000379995 FYCO1Q9BQS8 1478 aa15.36■□□□□ 0.05
C9orf72-201ENST00000379995 FBXO41Q8TF61 875 aa15.36■□□□□ 0.05
C9orf72-201ENST00000379995 ARHGEF12Q9NZN5 1544 aa15.36■□□□□ 0.05
C9orf72-201ENST00000379995 MLH3Q9UHC1 1453 aa15.35■□□□□ 0.05
C9orf72-201ENST00000379995 ZNF777Q9ULD5 760 aaPredicted RBP15.35■□□□□ 0.05
C9orf72-201ENST00000379995 KDM5CP41229 1560 aa15.35■□□□□ 0.05
C9orf72-201ENST00000379995 LRRIQ1Q96JM4 1722 aa15.33■□□□□ 0.04
C9orf72-201ENST00000379995 ABCC1P33527 1531 aa15.32■□□□□ 0.04
C9orf72-201ENST00000379995 GPATCH8Q9UKJ3 1502 aaKnown RBP15.3■□□□□ 0.04
C9orf72-201ENST00000379995 DIP2CQ9Y2E4 1556 aa15.3■□□□□ 0.04
C9orf72-201ENST00000379995 PREX2Q70Z35 1606 aa15.29■□□□□ 0.04
C9orf72-201ENST00000379995 HNRNPMP52272 730 aaKnown RBP eCLIP15.29■□□□□ 0.04
C9orf72-201ENST00000379995 ESF1Q9H501 851 aaKnown RBP15.29■□□□□ 0.04
C9orf72-201ENST00000379995 CFDP1Q9UEE9 299 aaPredicted RBP15.29■□□□□ 0.04
C9orf72-201ENST00000379995 CDC42BPBQ9Y5S2 1711 aa15.28■□□□□ 0.04
C9orf72-201ENST00000379995 MTUS2Q5JR59 1369 aa15.27■□□□□ 0.04
C9orf72-201ENST00000379995 CCNB3Q8WWL7 1395 aa15.27■□□□□ 0.04
C9orf72-201ENST00000379995 SPAG9O60271 1321 aaKnown RBP15.27■□□□□ 0.04
C9orf72-201ENST00000379995 REREQ9P2R6 1566 aa15.27■□□□□ 0.03
C9orf72-201ENST00000379995 FER1L4A9Z1Z3 1794 aa15.26■□□□□ 0.03
C9orf72-201ENST00000379995 AGLP35573 1532 aa15.26■□□□□ 0.03
C9orf72-201ENST00000379995 ABCA6Q8N139 1617 aa15.25■□□□□ 0.03
C9orf72-201ENST00000379995 KIAA1107Q9UPP5 1409 aa15.25■□□□□ 0.03
C9orf72-201ENST00000379995 UHRF1BP1Q6BDS2 1440 aa15.24■□□□□ 0.03
C9orf72-201ENST00000379995 SAMD9LQ8IVG5 1584 aa15.23■□□□□ 0.03
C9orf72-201ENST00000379995 SYCP2Q9BX26 1530 aa15.22■□□□□ 0.03
C9orf72-201ENST00000379995 CERKQ8TCT0 537 aa15.22■□□□□ 0.03
C9orf72-201ENST00000379995 ITSN2Q9NZM3 1697 aa15.22■□□□□ 0.03
C9orf72-201ENST00000379995 PLEKHH2Q8IVE3 1493 aa15.21■□□□□ 0.03
C9orf72-201ENST00000379995 ZNF644Q9H582 1327 aaPredicted RBP15.21■□□□□ 0.03
C9orf72-201ENST00000379995 CEP162Q5TB80 1403 aa15.21■□□□□ 0.03
C9orf72-201ENST00000379995 CNTLNQ9NXG0 1405 aa15.2■□□□□ 0.02
C9orf72-201ENST00000379995 DMRT2Q9Y5R5 561 aa15.2■□□□□ 0.02
C9orf72-201ENST00000379995 CDC42BPAQ5VT25 1732 aa15.2■□□□□ 0.02
C9orf72-201ENST00000379995 KIDINS220Q9ULH0 1771 aa15.19■□□□□ 0.02
C9orf72-201ENST00000379995 ZMYM3Q14202 1370 aa15.17■□□□□ 0.02
C9orf72-201ENST00000379995 A2MP01023 1474 aa15.16■□□□□ 0.02
C9orf72-201ENST00000379995 GGT6Q6P531 493 aa15.16■□□□□ 0.02
C9orf72-201ENST00000379995 PREX1Q8TCU6 1659 aa15.16■□□□□ 0.02
C9orf72-201ENST00000379995 ATP7AQ04656 1500 aa15.15■□□□□ 0.02
C9orf72-201ENST00000379995 EHBP1L1Q8N3D4 1523 aa15.15■□□□□ 0.02
C9orf72-201ENST00000379995 MBD5Q9P267 1494 aa15.14■□□□□ 0.01
C9orf72-201ENST00000379995 LOC105371045A0A1W2PR82 267 aa15.13■□□□□ 0.01
C9orf72-201ENST00000379995 TIAM1Q13009 1591 aa15.12■□□□□ 0.01
C9orf72-201ENST00000379995 NPATQ14207 1427 aa15.12■□□□□ 0.01
C9orf72-201ENST00000379995 PTPRTO14522 1441 aa15.11■□□□□ 0.01
C9orf72-201ENST00000379995 C3P01024 1663 aa15.11■□□□□ 0.01
C9orf72-201ENST00000379995 INO80Q9ULG1 1556 aaPredicted RBP15.11■□□□□ 0.01
C9orf72-201ENST00000379995 RTEL1-TNFRSF6BF6WH68 1400 aa15.1■□□□□ 0.01
C9orf72-201ENST00000379995 NCOA2Q15596 1464 aa15.1■□□□□ 0.01
C9orf72-201ENST00000379995 PLXNC1O60486 1568 aa15.1■□□□□ 0.01
C9orf72-201ENST00000379995 DHX29Q7Z478 1369 aaKnown RBP15.1■□□□□ 0.01
C9orf72-201ENST00000379995 NCOA1Q15788 1441 aa15.09■□□□□ 0.01
C9orf72-201ENST00000379995 RSPH4AQ5TD94 716 aa15.08■□□□□ 0
C9orf72-201ENST00000379995 PTPRKQ15262 1439 aa15.08■□□□□ 0
C9orf72-201ENST00000379995 SETD1BQ9UPS6 1966 aaKnown RBP15.07■□□□□ 0
C9orf72-201ENST00000379995 STRCQ7RTU9 1775 aa15.06■□□□□ 0
C9orf72-201ENST00000379995 KIF3BO15066 747 aa15.06■□□□□ 0
C9orf72-201ENST00000379995 NCKAP5LQ9HCH0 1330 aa15.06■□□□□ 0
C9orf72-201ENST00000379995 CCDC141Q6ZP82 1450 aa15.06■□□□□ 0
C9orf72-201ENST00000379995 VPS8Q8N3P4 1428 aa15.05■□□□□ -0
C9orf72-201ENST00000379995 SUPT6HQ7KZ85 1726 aaKnown RBP15.05■□□□□ -0
C9orf72-201ENST00000379995 CAMSAP2Q08AD1 1489 aa15.04■□□□□ -0
C9orf72-201ENST00000379995 TSPY4P0CV99 314 aa15.04■□□□□ -0
C9orf72-201ENST00000379995 TSPY10P0CW01 314 aa15.04■□□□□ -0
C9orf72-201ENST00000379995 KANK4Q5T7N3 995 aaPredicted RBP15.03■□□□□ -0
C9orf72-201ENST00000379995 CAMSAP1Q5T5Y3 1602 aa15.03■□□□□ -0
C9orf72-201ENST00000379995 LRRC9Q6ZRR7 1453 aa15.02■□□□□ -0
C9orf72-201ENST00000379995 PKD2Q13563 968 aa15.02■□□□□ -0
C9orf72-201ENST00000379995 MROH2AA6NES4 1674 aa15.02□□□□□ -0.01
C9orf72-201ENST00000379995 FBXO31Q5XUX0 539 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms