RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 HECW1Q76N89 1606 aa15.38■□□□□ 0.05
NEDD9-201ENST00000379433 MAPKBP1O60336 1514 aa15.37■□□□□ 0.05
NEDD9-201ENST00000379433 SUPT6HQ7KZ85 1726 aaKnown RBP15.37■□□□□ 0.05
NEDD9-201ENST00000379433 EHBP1L1Q8N3D4 1523 aa15.37■□□□□ 0.05
NEDD9-201ENST00000379433 KIAA0556O60303 1618 aa15.37■□□□□ 0.05
NEDD9-201ENST00000379433 HNRNPMP52272 730 aaKnown RBP eCLIP15.37■□□□□ 0.05
NEDD9-201ENST00000379433 SLC4A1APQ9BWU0 796 aaKnown RBP15.36■□□□□ 0.05
NEDD9-201ENST00000379433 UGGT2Q9NYU1 1516 aa15.36■□□□□ 0.05
NEDD9-201ENST00000379433 PTPRGP23470 1445 aa15.35■□□□□ 0.05
NEDD9-201ENST00000379433 NAIPQ13075 1403 aa15.34■□□□□ 0.05
NEDD9-201ENST00000379433 PTPN23Q9H3S7 1636 aa15.33■□□□□ 0.04
NEDD9-201ENST00000379433 ACIN1Q9UKV3 1341 aaKnown RBP15.33■□□□□ 0.04
NEDD9-201ENST00000379433 MPHOSPH9Q99550 1183 aa15.33■□□□□ 0.04
NEDD9-201ENST00000379433 POLR3GLQ9BT43 218 aa15.32■□□□□ 0.04
NEDD9-201ENST00000379433 MYT1LQ9UL68 1186 aa15.32■□□□□ 0.04
NEDD9-201ENST00000379433 GTF3C3Q9Y5Q9 886 aa15.32■□□□□ 0.04
NEDD9-201ENST00000379433 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.31■□□□□ 0.04
NEDD9-201ENST00000379433 PPP1R15AO75807 674 aaPredicted RBP15.3■□□□□ 0.04
NEDD9-201ENST00000379433 HFM1A2PYH4 1435 aa15.3■□□□□ 0.04
NEDD9-201ENST00000379433 RAPGEF6Q8TEU7 1601 aa15.28■□□□□ 0.04
NEDD9-201ENST00000379433 TSPY4P0CV99 314 aa15.28■□□□□ 0.04
NEDD9-201ENST00000379433 TSPY10P0CW01 314 aa15.28■□□□□ 0.04
NEDD9-201ENST00000379433 NUP160Q12769 1436 aa15.27■□□□□ 0.04
NEDD9-201ENST00000379433 UBE2Q2Q8WVN8 375 aa15.27■□□□□ 0.03
NEDD9-201ENST00000379433 TROQ12816 1431 aaPredicted RBP15.25■□□□□ 0.03
NEDD9-201ENST00000379433 ARHGEF11O15085 1522 aa15.25■□□□□ 0.03
NEDD9-201ENST00000379433 UACAQ9BZF9 1416 aa15.25■□□□□ 0.03
NEDD9-201ENST00000379433 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.24■□□□□ 0.03
NEDD9-201ENST00000379433 L3MBTL2Q969R5 705 aa15.23■□□□□ 0.03
NEDD9-201ENST00000379433 KDM2AQ9Y2K7 1162 aa15.23■□□□□ 0.03
NEDD9-201ENST00000379433 ABCC5O15440 1437 aa15.23■□□□□ 0.03
NEDD9-201ENST00000379433 ATP10BO94823 1461 aa15.22■□□□□ 0.03
NEDD9-201ENST00000379433 DAPK1P53355 1430 aa15.22■□□□□ 0.03
NEDD9-201ENST00000379433 KDM6BO15054 1643 aa15.22■□□□□ 0.03
NEDD9-201ENST00000379433 KIF14Q15058 1648 aa15.21■□□□□ 0.03
NEDD9-201ENST00000379433 PKD2Q13563 968 aa15.21■□□□□ 0.03
NEDD9-201ENST00000379433 ANO8Q9HCE9 1232 aaPredicted RBP15.21■□□□□ 0.03
NEDD9-201ENST00000379433 ERCC6L2Q5T890 1561 aa15.2■□□□□ 0.02
NEDD9-201ENST00000379433 HOMEZQ8IX15 550 aa15.2■□□□□ 0.02
NEDD9-201ENST00000379433 MIA2Q96PC5 1412 aa15.19■□□□□ 0.02
NEDD9-201ENST00000379433 GPATCH8Q9UKJ3 1502 aaKnown RBP15.18■□□□□ 0.02
NEDD9-201ENST00000379433 RGL3Q3MIN7 710 aa15.17■□□□□ 0.02
NEDD9-201ENST00000379433 PKNOX2Q96KN3 472 aa15.17■□□□□ 0.02
NEDD9-201ENST00000379433 CAMSAP2Q08AD1 1489 aa15.17■□□□□ 0.02
NEDD9-201ENST00000379433 CHD1O14646 1710 aa15.16■□□□□ 0.02
NEDD9-201ENST00000379433 PDIA4P13667 645 aaKnown RBP15.15■□□□□ 0.02
NEDD9-201ENST00000379433 NUP155O75694 1391 aa15.15■□□□□ 0.02
NEDD9-201ENST00000379433 HSPA5P11021 654 aaKnown RBP15.14■□□□□ 0.01
NEDD9-201ENST00000379433 AMER1Q5JTC6 1135 aaPredicted RBP15.14■□□□□ 0.01
NEDD9-201ENST00000379433 TCOF1Q13428 1488 aaKnown RBP15.12■□□□□ 0.01
NEDD9-201ENST00000379433 ANKRD30AQ9BXX3 1397 aa15.12■□□□□ 0.01
NEDD9-201ENST00000379433 SENP3-EIF4A1A0A087X0R7 540 aa15.11■□□□□ 0.01
NEDD9-201ENST00000379433 NBPF8Q3BBV2 869 aa15.1■□□□□ 0.01
NEDD9-201ENST00000379433 ANP32CO43423 234 aa15.1■□□□□ 0.01
NEDD9-201ENST00000379433 NCOA1Q15788 1441 aa15.09■□□□□ 0.01
NEDD9-201ENST00000379433 AFAP1Q8N556 730 aa15.09■□□□□ 0.01
NEDD9-201ENST00000379433 EIF4G2P78344 907 aaKnown RBP eCLIP15.08■□□□□ 0
NEDD9-201ENST00000379433 ANKRD50Q9ULJ7 1429 aa15.08■□□□□ 0
NEDD9-201ENST00000379433 SENP3Q9H4L4 574 aaPredicted RBP15.08■□□□□ 0
NEDD9-201ENST00000379433 KIF15Q9NS87 1388 aa15.07■□□□□ 0
NEDD9-201ENST00000379433 AKNAQ7Z591 1439 aa15.07■□□□□ 0
NEDD9-201ENST00000379433 PDE4CQ08493 712 aa15.06■□□□□ 0
NEDD9-201ENST00000379433 C9orf84Q5VXU9 1444 aa15.06■□□□□ 0
NEDD9-201ENST00000379433 DENND4BO75064 1496 aaPredicted RBP15.06■□□□□ 0
NEDD9-201ENST00000379433 DCAF11Q8TEB1 546 aa15.05■□□□□ 0
NEDD9-201ENST00000379433 ABCA8O94911 1581 aa15.05■□□□□ -0
NEDD9-201ENST00000379433 ARHGAP5Q13017 1502 aa15.05■□□□□ -0
NEDD9-201ENST00000379433 OSCARQ8IYS5 282 aa15.04■□□□□ -0
NEDD9-201ENST00000379433 C11orf95C9JLR9 678 aaPredicted RBP15.03■□□□□ -0
NEDD9-201ENST00000379433 NPM1P06748 294 aaKnown RBP eCLIP15.03■□□□□ -0
NEDD9-201ENST00000379433 ROCK1Q13464 1354 aa15.02□□□□□ -0.01
NEDD9-201ENST00000379433 ANKRD30BQ9BXX2 1392 aa15.02□□□□□ -0.01
NEDD9-201ENST00000379433 DNMT1P26358 1616 aaKnown RBP15.01□□□□□ -0.01
NEDD9-201ENST00000379433 EFCAB2Q5VUJ9 269 aa15.01□□□□□ -0.01
NEDD9-201ENST00000379433 WASHC2AQ641Q2 1341 aa15□□□□□ -0.01
NEDD9-201ENST00000379433 BCANQ96GW7 911 aa14.99□□□□□ -0.01
NEDD9-201ENST00000379433 ABCC10Q5T3U5 1492 aa14.98□□□□□ -0.01
NEDD9-201ENST00000379433 CYB5RLQ6IPT4 315 aa14.98□□□□□ -0.01
NEDD9-201ENST00000379433 ANP32EQ9BTT0 268 aa14.98□□□□□ -0.01
NEDD9-201ENST00000379433 CARD11Q9BXL7 1154 aa14.96□□□□□ -0.01
NEDD9-201ENST00000379433 TAOK2Q9UL54 1235 aa14.96□□□□□ -0.01
NEDD9-201ENST00000379433 SYCP2Q9BX26 1530 aa14.96□□□□□ -0.02
NEDD9-201ENST00000379433 NEFLP07196 543 aa14.95□□□□□ -0.02
NEDD9-201ENST00000379433 CDC42BPAQ5VT25 1732 aa14.95□□□□□ -0.02
NEDD9-201ENST00000379433 KCNA4P22459 653 aa14.95□□□□□ -0.02
NEDD9-201ENST00000379433 NPM2Q86SE8 214 aaKnown RBP14.95□□□□□ -0.02
NEDD9-201ENST00000379433 GCC2Q8IWJ2 1684 aa14.95□□□□□ -0.02
NEDD9-201ENST00000379433 FAM9BQ8IZU0 186 aa14.95□□□□□ -0.02
NEDD9-201ENST00000379433 ITSN2Q9NZM3 1697 aa14.94□□□□□ -0.02
NEDD9-201ENST00000379433 PZPP20742 1482 aa14.94□□□□□ -0.02
NEDD9-201ENST00000379433 SPAG9O60271 1321 aaKnown RBP14.94□□□□□ -0.02
NEDD9-201ENST00000379433 C14orf37Q86TY3 774 aa14.93□□□□□ -0.02
NEDD9-201ENST00000379433 TTC37Q6PGP7 1564 aa14.93□□□□□ -0.02
NEDD9-201ENST00000379433 KIF3BO15066 747 aa14.92□□□□□ -0.02
NEDD9-201ENST00000379433 HAP1P54257 671 aaPredicted RBP14.92□□□□□ -0.02
NEDD9-201ENST00000379433 CHGAP10645 457 aaKnown RBP14.92□□□□□ -0.02
NEDD9-201ENST00000379433 KIAA1107Q9UPP5 1409 aa14.91□□□□□ -0.02
NEDD9-201ENST00000379433 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.91□□□□□ -0.02
NEDD9-201ENST00000379433 ABCC2Q92887 1545 aa14.91□□□□□ -0.02
NEDD9-201ENST00000379433 CCDC141Q6ZP82 1450 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms