RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 NCOA2Q15596 1464 aa29.3■■■□□ 2.28
SSU72-203ENST00000378725 SUPT6HQ7KZ85 1726 aaKnown RBP29.28■■■□□ 2.28
SSU72-203ENST00000378725 CFAP74Q9C0B2 1584 aa29.27■■■□□ 2.28
SSU72-203ENST00000378725 ARHGAP5Q13017 1502 aa29.27■■■□□ 2.28
SSU72-203ENST00000378725 PREX2Q70Z35 1606 aa29.27■■■□□ 2.28
SSU72-203ENST00000378725 CDC42BPAQ5VT25 1732 aa29.25■■■□□ 2.27
SSU72-203ENST00000378725 CDC42BPBQ9Y5S2 1711 aa29.25■■■□□ 2.27
SSU72-203ENST00000378725 CFDP1Q9UEE9 299 aaPredicted RBP29.23■■■□□ 2.27
SSU72-203ENST00000378725 ADGRL1O94910 1474 aa29.18■■■□□ 2.26
SSU72-203ENST00000378725 RAPGEF3O95398 923 aa29.18■■■□□ 2.26
SSU72-203ENST00000378725 SCAPERQ9BY12 1400 aa29.18■■■□□ 2.26
SSU72-203ENST00000378725 DENND4BO75064 1496 aaPredicted RBP29.17■■■□□ 2.26
SSU72-203ENST00000378725 ZNF777Q9ULD5 760 aaPredicted RBP29.15■■■□□ 2.26
SSU72-203ENST00000378725 ITSN2Q9NZM3 1697 aa29.13■■■□□ 2.25
SSU72-203ENST00000378725 MYOM3Q5VTT5 1437 aa29.11■■■□□ 2.25
SSU72-203ENST00000378725 SAMD9LQ8IVG5 1584 aa29.1■■■□□ 2.25
SSU72-203ENST00000378725 KIAA1107Q9UPP5 1409 aa29.1■■■□□ 2.25
SSU72-203ENST00000378725 ABCC1P33527 1531 aa29.1■■■□□ 2.25
SSU72-203ENST00000378725 ARHGEF12Q9NZN5 1544 aa29.1■■■□□ 2.25
SSU72-203ENST00000378725 ZNF644Q9H582 1327 aaPredicted RBP29.09■■■□□ 2.25
SSU72-203ENST00000378725 POGZQ7Z3K3 1410 aa29.09■■■□□ 2.25
SSU72-203ENST00000378725 MIA2Q96PC5 1412 aa29.08■■■□□ 2.25
SSU72-203ENST00000378725 PLEKHH2Q8IVE3 1493 aa29.08■■■□□ 2.25
SSU72-203ENST00000378725 FRMPD1Q5SYB0 1578 aa29.08■■■□□ 2.25
SSU72-203ENST00000378725 RICTORQ6R327 1708 aa29.06■■■□□ 2.24
SSU72-203ENST00000378725 HNRNPMP52272 730 aaKnown RBP eCLIP29.05■■■□□ 2.246e-7■■■■□ 23.5
SSU72-203ENST00000378725 AFAP1Q8N556 730 aa29.05■■■□□ 2.24
SSU72-203ENST00000378725 TRAPPC8Q9Y2L5 1435 aa29.03■■■□□ 2.24
SSU72-203ENST00000378725 PPARGC1BQ86YN6 1023 aaKnown RBP29.03■■■□□ 2.24
SSU72-203ENST00000378725 ZNF518AQ6AHZ1 1483 aa29.03■■■□□ 2.24
SSU72-203ENST00000378725 MBD5Q9P267 1494 aa29■■■□□ 2.23
SSU72-203ENST00000378725 ZMYM4Q5VZL5 1548 aa28.99■■■□□ 2.23
SSU72-203ENST00000378725 SYCP2Q9BX26 1530 aa28.99■■■□□ 2.23
SSU72-203ENST00000378725 CAMSAP2Q08AD1 1489 aa28.99■■■□□ 2.23
SSU72-203ENST00000378725 MAGI2Q86UL8 1455 aa28.97■■■□□ 2.23
SSU72-203ENST00000378725 FGD6Q6ZV73 1430 aa28.97■■■□□ 2.23
SSU72-203ENST00000378725 KDM5CP41229 1560 aa28.96■■■□□ 2.23
SSU72-203ENST00000378725 RSPH4AQ5TD94 716 aa28.96■■■□□ 2.23
SSU72-203ENST00000378725 MLH3Q9UHC1 1453 aa28.92■■■□□ 2.22
SSU72-203ENST00000378725 TCOF1Q13428 1488 aaKnown RBP28.91■■■□□ 2.22
SSU72-203ENST00000378725 PTPN23Q9H3S7 1636 aa28.89■■■□□ 2.22
SSU72-203ENST00000378725 YEATS2Q9ULM3 1422 aa28.88■■■□□ 2.21
SSU72-203ENST00000378725 SPAG9O60271 1321 aaKnown RBP28.88■■■□□ 2.21
SSU72-203ENST00000378725 ZFYVE16Q7Z3T8 1539 aa28.87■■■□□ 2.21
SSU72-203ENST00000378725 ARHGEF5Q12774 1597 aa28.87■■■□□ 2.21
SSU72-203ENST00000378725 CCDC141Q6ZP82 1450 aa28.85■■■□□ 2.21
SSU72-203ENST00000378725 ARHGEF40Q8TER5 1519 aa28.84■■■□□ 2.21
SSU72-203ENST00000378725 HECW2Q9P2P5 1572 aa28.84■■■□□ 2.21
SSU72-203ENST00000378725 MYT1LQ9UL68 1186 aa28.83■■■□□ 2.21
SSU72-203ENST00000378725 RTEL1-TNFRSF6BF6WH68 1400 aa28.82■■■□□ 2.2
SSU72-203ENST00000378725 ATP10AO60312 1499 aa28.81■■■□□ 2.2
SSU72-203ENST00000378725 TSPY4P0CV99 314 aa28.81■■■□□ 2.2
SSU72-203ENST00000378725 TSPY10P0CW01 314 aa28.81■■■□□ 2.2
SSU72-203ENST00000378725 KIDINS220Q9ULH0 1771 aa28.79■■■□□ 2.2
SSU72-203ENST00000378725 FAM50AQ14320 339 aaKnown RBP28.78■■■□□ 2.2
SSU72-203ENST00000378725 ABCC5O15440 1437 aa28.77■■■□□ 2.2
SSU72-203ENST00000378725 INO80Q9ULG1 1556 aaPredicted RBP28.77■■■□□ 2.2
SSU72-203ENST00000378725 ATP7AQ04656 1500 aa28.77■■■□□ 2.2
SSU72-203ENST00000378725 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.75■■■□□ 2.191e-6■■□□□ 14.3
SSU72-203ENST00000378725 C9orf84Q5VXU9 1444 aa28.75■■■□□ 2.19
SSU72-203ENST00000378725 DIP2CQ9Y2E4 1556 aa28.75■■■□□ 2.19
SSU72-203ENST00000378725 DAPK1P53355 1430 aa28.73■■■□□ 2.19
SSU72-203ENST00000378725 RRBP1Q9P2E9 1410 aaKnown RBP28.73■■■□□ 2.19
SSU72-203ENST00000378725 ABCA6Q8N139 1617 aa28.72■■■□□ 2.19
SSU72-203ENST00000378725 DNMT1P26358 1616 aaKnown RBP28.71■■■□□ 2.19
SSU72-203ENST00000378725 MAST1Q9Y2H9 1570 aa28.71■■■□□ 2.19
SSU72-203ENST00000378725 REREQ9P2R6 1566 aa28.7■■■□□ 2.18
SSU72-203ENST00000378725 SHANK2Q9UPX8 1470 aa28.69■■■□□ 2.18
SSU72-203ENST00000378725 ARID4BQ4LE39 1312 aaPredicted RBP28.66■■■□□ 2.18
SSU72-203ENST00000378725 A2MP01023 1474 aa28.65■■■□□ 2.18
SSU72-203ENST00000378725 SIGLEC1Q9BZZ2 1709 aa28.63■■■□□ 2.17
SSU72-203ENST00000378725 AGLP35573 1532 aa28.63■■■□□ 2.17
SSU72-203ENST00000378725 DHX29Q7Z478 1369 aaKnown RBP28.62■■■□□ 2.17
SSU72-203ENST00000378725 CROCC2H7BZ55 1655 aa28.62■■■□□ 2.17
SSU72-203ENST00000378725 KDM4FA0A1W2PPD8 638 aa28.62■■■□□ 2.17
SSU72-203ENST00000378725 PTPRKQ15262 1439 aa28.6■■■□□ 2.17
SSU72-203ENST00000378725 ADGBQ8N7X0 1667 aa28.59■■■□□ 2.17
SSU72-203ENST00000378725 CHIC2Q9UKJ5 165 aa28.59■■■□□ 2.17
SSU72-203ENST00000378725 PLXNC1O60486 1568 aa28.58■■■□□ 2.17
SSU72-203ENST00000378725 ADGRL2O95490 1459 aa28.56■■■□□ 2.16
SSU72-203ENST00000378725 NCOA1Q15788 1441 aa28.56■■■□□ 2.16
SSU72-203ENST00000378725 ANKRD30AQ9BXX3 1397 aa28.56■■■□□ 2.16
SSU72-203ENST00000378725 RRP7BPQ9NSQ0 103 aa28.55■■■□□ 2.16
SSU72-203ENST00000378725 BCORL1Q5H9F3 1711 aa28.54■■■□□ 2.16
SSU72-203ENST00000378725 KIF15Q9NS87 1388 aa28.52■■■□□ 2.16
SSU72-203ENST00000378725 ITGAEP38570 1179 aa28.52■■■□□ 2.16
SSU72-203ENST00000378725 MLECQ14165 292 aa28.52■■■□□ 2.16
SSU72-203ENST00000378725 ROCK1Q13464 1354 aa28.5■■■□□ 2.15
SSU72-203ENST00000378725 DUOX2Q9NRD8 1548 aa28.5■■■□□ 2.15
SSU72-203ENST00000378725 ADAMTSL3P82987 1691 aa28.5■■■□□ 2.15
SSU72-203ENST00000378725 KIF3BO15066 747 aa28.46■■■□□ 2.15
SSU72-203ENST00000378725 ERBINQ96RT1 1412 aa28.43■■■□□ 2.14
SSU72-203ENST00000378725 PPP6R1Q9UPN7 881 aa28.43■■■□□ 2.14
SSU72-203ENST00000378725 GGT6Q6P531 493 aa28.42■■■□□ 2.14
SSU72-203ENST00000378725 MADDQ8WXG6 1647 aa28.39■■■□□ 2.13
SSU72-203ENST00000378725 EIF2AK4Q9P2K8 1649 aaKnown RBP28.39■■■□□ 2.13
SSU72-203ENST00000378725 ANKRD50Q9ULJ7 1429 aa28.36■■■□□ 2.13
SSU72-203ENST00000378725 PTPRMP28827 1452 aa28.34■■■□□ 2.13
SSU72-203ENST00000378725 ESF1Q9H501 851 aaKnown RBP28.33■■■□□ 2.13
SSU72-203ENST00000378725 CNTLNQ9NXG0 1405 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms