RNA–Protein interactions for RNA: ENST00000378602.3

TMEM52-203, Transcript of transmembrane protein 52, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM52, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM52-203ENST00000378602 CDK11AQ9UQ88 783 aaPredicted RBP24.02■■□□□ 1.44
TMEM52-203ENST00000378602 PCF11O94913 1555 aaKnown RBP24■■□□□ 1.43
TMEM52-203ENST00000378602 MYO5CQ9NQX4 1742 aa23.98■■□□□ 1.43
TMEM52-203ENST00000378602 KIF14Q15058 1648 aa23.98■■□□□ 1.43
TMEM52-203ENST00000378602 EFCAB2Q5VUJ9 269 aa23.97■■□□□ 1.43
TMEM52-203ENST00000378602 LMTK3Q96Q04 1460 aa23.97■■□□□ 1.43
TMEM52-203ENST00000378602 SIGLEC1Q9BZZ2 1709 aa23.97■■□□□ 1.43
TMEM52-203ENST00000378602 TROQ12816 1431 aaPredicted RBP23.96■■□□□ 1.43
TMEM52-203ENST00000378602 PLPPR3Q6T4P5 718 aa23.96■■□□□ 1.43
TMEM52-203ENST00000378602 MLECQ14165 292 aa23.95■■□□□ 1.42
TMEM52-203ENST00000378602 CLIP1P30622 1438 aa23.94■■□□□ 1.42
TMEM52-203ENST00000378602 ARHGAP5Q13017 1502 aa23.92■■□□□ 1.42
TMEM52-203ENST00000378602 ATP10AO60312 1499 aa23.9■■□□□ 1.42
TMEM52-203ENST00000378602 LRRIQ1Q96JM4 1722 aa23.9■■□□□ 1.42
TMEM52-203ENST00000378602 C9orf84Q5VXU9 1444 aa23.89■■□□□ 1.41
TMEM52-203ENST00000378602 FER1L4A9Z1Z3 1794 aa23.88■■□□□ 1.41
TMEM52-203ENST00000378602 ZNF518AQ6AHZ1 1483 aa23.87■■□□□ 1.41
TMEM52-203ENST00000378602 HSPA2P54652 639 aa23.85■■□□□ 1.41
TMEM52-203ENST00000378602 FBXO41Q8TF61 875 aa23.85■■□□□ 1.41
TMEM52-203ENST00000378602 CASKIN1Q8WXD9 1431 aa23.84■■□□□ 1.41
TMEM52-203ENST00000378602 CCDC18Q5T9S5 1454 aa23.83■■□□□ 1.41
TMEM52-203ENST00000378602 AFAP1Q8N556 730 aa23.83■■□□□ 1.41
TMEM52-203ENST00000378602 ARHGEF12Q9NZN5 1544 aa23.83■■□□□ 1.41
TMEM52-203ENST00000378602 KDM5CP41229 1560 aa23.82■■□□□ 1.4
TMEM52-203ENST00000378602 MYT1LQ9UL68 1186 aa23.82■■□□□ 1.4
TMEM52-203ENST00000378602 CDC42BPBQ9Y5S2 1711 aa23.79■■□□□ 1.4
TMEM52-203ENST00000378602 PREX2Q70Z35 1606 aa23.78■■□□□ 1.4
TMEM52-203ENST00000378602 DIP2CQ9Y2E4 1556 aa23.77■■□□□ 1.4
TMEM52-203ENST00000378602 ABCC1P33527 1531 aa23.75■■□□□ 1.39
TMEM52-203ENST00000378602 FYCO1Q9BQS8 1478 aa23.75■■□□□ 1.39
TMEM52-203ENST00000378602 TRAPPC8Q9Y2L5 1435 aa23.73■■□□□ 1.39
TMEM52-203ENST00000378602 MLH3Q9UHC1 1453 aa23.73■■□□□ 1.39
TMEM52-203ENST00000378602 ABCA6Q8N139 1617 aa23.73■■□□□ 1.39
TMEM52-203ENST00000378602 CEBPAP49715 358 aaPredicted RBP23.72■■□□□ 1.39
TMEM52-203ENST00000378602 REREQ9P2R6 1566 aa23.71■■□□□ 1.39
TMEM52-203ENST00000378602 ITSN2Q9NZM3 1697 aa23.7■■□□□ 1.39
TMEM52-203ENST00000378602 PREX1Q8TCU6 1659 aa23.7■■□□□ 1.38
TMEM52-203ENST00000378602 CDC42BPAQ5VT25 1732 aa23.68■■□□□ 1.38
TMEM52-203ENST00000378602 AGLP35573 1532 aa23.64■■□□□ 1.38
TMEM52-203ENST00000378602 ZNF777Q9ULD5 760 aaPredicted RBP23.64■■□□□ 1.37
TMEM52-203ENST00000378602 UHRF1BP1Q6BDS2 1440 aa23.63■■□□□ 1.37
TMEM52-203ENST00000378602 ESF1Q9H501 851 aaKnown RBP23.62■■□□□ 1.37
TMEM52-203ENST00000378602 KIDINS220Q9ULH0 1771 aa23.62■■□□□ 1.37
TMEM52-203ENST00000378602 SAMD9LQ8IVG5 1584 aa23.61■■□□□ 1.37
TMEM52-203ENST00000378602 SYCP2Q9BX26 1530 aa23.6■■□□□ 1.37
TMEM52-203ENST00000378602 GPATCH8Q9UKJ3 1502 aaKnown RBP23.6■■□□□ 1.37
TMEM52-203ENST00000378602 C3P01024 1663 aa23.58■■□□□ 1.37
TMEM52-203ENST00000378602 CERKQ8TCT0 537 aa23.58■■□□□ 1.37
TMEM52-203ENST00000378602 HNRNPMP52272 730 aaKnown RBP eCLIP23.55■■□□□ 1.36
TMEM52-203ENST00000378602 SPAG9O60271 1321 aaKnown RBP23.55■■□□□ 1.36
TMEM52-203ENST00000378602 CFDP1Q9UEE9 299 aaPredicted RBP23.54■■□□□ 1.36
TMEM52-203ENST00000378602 MTUS2Q5JR59 1369 aa23.53■■□□□ 1.36
TMEM52-203ENST00000378602 CCNB3Q8WWL7 1395 aa23.53■■□□□ 1.36
TMEM52-203ENST00000378602 CNTLNQ9NXG0 1405 aa23.53■■□□□ 1.36
TMEM52-203ENST00000378602 SETD1BQ9UPS6 1966 aaKnown RBP23.53■■□□□ 1.36
TMEM52-203ENST00000378602 PLEKHH2Q8IVE3 1493 aa23.52■■□□□ 1.36
TMEM52-203ENST00000378602 DMRT2Q9Y5R5 561 aa23.52■■□□□ 1.36
TMEM52-203ENST00000378602 STRCQ7RTU9 1775 aa23.52■■□□□ 1.36
TMEM52-203ENST00000378602 KIAA1107Q9UPP5 1409 aa23.5■■□□□ 1.35
TMEM52-203ENST00000378602 ATP7AQ04656 1500 aa23.5■■□□□ 1.35
TMEM52-203ENST00000378602 INO80Q9ULG1 1556 aaPredicted RBP23.47■■□□□ 1.35
TMEM52-203ENST00000378602 SUPT6HQ7KZ85 1726 aaKnown RBP23.47■■□□□ 1.35
TMEM52-203ENST00000378602 EHBP1L1Q8N3D4 1523 aa23.44■■□□□ 1.34
TMEM52-203ENST00000378602 A2MP01023 1474 aa23.44■■□□□ 1.34
TMEM52-203ENST00000378602 MROH2AA6NES4 1674 aa23.44■■□□□ 1.34
TMEM52-203ENST00000378602 PLXNC1O60486 1568 aa23.43■■□□□ 1.34
TMEM52-203ENST00000378602 TIAM1Q13009 1591 aa23.43■■□□□ 1.34
TMEM52-203ENST00000378602 PTPRTO14522 1441 aa23.42■■□□□ 1.34
TMEM52-203ENST00000378602 NPATQ14207 1427 aa23.42■■□□□ 1.34
TMEM52-203ENST00000378602 ZMYM3Q14202 1370 aa23.41■■□□□ 1.34
TMEM52-203ENST00000378602 CEP162Q5TB80 1403 aa23.41■■□□□ 1.34
TMEM52-203ENST00000378602 ZNF644Q9H582 1327 aaPredicted RBP23.4■■□□□ 1.34
TMEM52-203ENST00000378602 NCOA1Q15788 1441 aa23.39■■□□□ 1.33
TMEM52-203ENST00000378602 CLTCQ00610 1675 aaKnown RBP23.38■■□□□ 1.33
TMEM52-203ENST00000378602 GGT6Q6P531 493 aa23.37■■□□□ 1.33
TMEM52-203ENST00000378602 ADGBQ8N7X0 1667 aa23.35■■□□□ 1.33
TMEM52-203ENST00000378602 MBD5Q9P267 1494 aa23.35■■□□□ 1.33
TMEM52-203ENST00000378602 CAMSAP1Q5T5Y3 1602 aa23.34■■□□□ 1.33
TMEM52-203ENST00000378602 MYO3AQ8NEV4 1616 aa23.31■■□□□ 1.32
TMEM52-203ENST00000378602 PTPRKQ15262 1439 aa23.31■■□□□ 1.32
TMEM52-203ENST00000378602 RTEL1-TNFRSF6BF6WH68 1400 aa23.3■■□□□ 1.32
TMEM52-203ENST00000378602 LTBP4Q8N2S1 1624 aa23.29■■□□□ 1.32
TMEM52-203ENST00000378602 NCOA2Q15596 1464 aa23.29■■□□□ 1.32
TMEM52-203ENST00000378602 PPP6R1Q9UPN7 881 aa23.28■■□□□ 1.32
TMEM52-203ENST00000378602 ZNF142P52746 1687 aaPredicted RBP23.28■■□□□ 1.32
TMEM52-203ENST00000378602 CCDC141Q6ZP82 1450 aa23.27■■□□□ 1.32
TMEM52-203ENST00000378602 NCKAP5LQ9HCH0 1330 aa23.27■■□□□ 1.32
TMEM52-203ENST00000378602 CEP170BQ9Y4F5 1589 aaPredicted RBP23.27■■□□□ 1.32
TMEM52-203ENST00000378602 CAMSAP2Q08AD1 1489 aa23.26■■□□□ 1.31
TMEM52-203ENST00000378602 DHX29Q7Z478 1369 aaKnown RBP23.26■■□□□ 1.31
TMEM52-203ENST00000378602 PLA2R1Q13018 1463 aa23.24■■□□□ 1.31
TMEM52-203ENST00000378602 KIF3BO15066 747 aa23.21■■□□□ 1.31
TMEM52-203ENST00000378602 IQSEC2Q5JU85 1478 aa23.21■■□□□ 1.31
TMEM52-203ENST00000378602 PKD2Q13563 968 aa23.2■■□□□ 1.3
TMEM52-203ENST00000378602 RSPH4AQ5TD94 716 aa23.19■■□□□ 1.3
TMEM52-203ENST00000378602 TCOF1Q13428 1488 aaKnown RBP23.18■■□□□ 1.3
TMEM52-203ENST00000378602 ZNF335Q9H4Z2 1342 aaPredicted RBP23.18■■□□□ 1.3
TMEM52-203ENST00000378602 A2ML1A8K2U0 1454 aa23.17■■□□□ 1.3
TMEM52-203ENST00000378602 KDM5DQ9BY66 1539 aa23.17■■□□□ 1.3
TMEM52-203ENST00000378602 VPS8Q8N3P4 1428 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms