RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 MAP3K4Q9Y6R4 1608 aa24.1■■□□□ 1.45
CCDC107-204ENST00000378409 CFDP1Q9UEE9 299 aaPredicted RBP24.09■■□□□ 1.45
CCDC107-204ENST00000378409 PLCH2O75038 1416 aa24.08■■□□□ 1.44
CCDC107-204ENST00000378409 FAM50AQ14320 339 aaKnown RBP24.07■■□□□ 1.44
CCDC107-204ENST00000378409 ARAP3Q8WWN8 1544 aa24.06■■□□□ 1.44
CCDC107-204ENST00000378409 TSPOAP1O95153 1857 aa24.06■■□□□ 1.44
CCDC107-204ENST00000378409 TCOF1Q13428 1488 aaKnown RBP24.06■■□□□ 1.44
CCDC107-204ENST00000378409 CD109Q6YHK3 1445 aa24.05■■□□□ 1.44
CCDC107-204ENST00000378409 CAMSAP2Q08AD1 1489 aa24.05■■□□□ 1.44
CCDC107-204ENST00000378409 FAM69CQ0P6D2 419 aa24.04■■□□□ 1.44
CCDC107-204ENST00000378409 SAMD9LQ8IVG5 1584 aa24.03■■□□□ 1.44
CCDC107-204ENST00000378409 ZNF777Q9ULD5 760 aaPredicted RBP24.03■■□□□ 1.44
CCDC107-204ENST00000378409 CFAP74Q9C0B2 1584 aa24■■□□□ 1.43
CCDC107-204ENST00000378409 ZNF644Q9H582 1327 aaPredicted RBP24■■□□□ 1.43
CCDC107-204ENST00000378409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24■■□□□ 1.43
CCDC107-204ENST00000378409 PCGF6Q9BYE7 350 aa23.99■■□□□ 1.43
CCDC107-204ENST00000378409 FANCAO15360 1455 aa23.99■■□□□ 1.43
CCDC107-204ENST00000378409 EFCAB2Q5VUJ9 269 aa23.98■■□□□ 1.43
CCDC107-204ENST00000378409 PPRC1Q5VV67 1664 aaKnown RBP23.96■■□□□ 1.43
CCDC107-204ENST00000378409 DNMT1P26358 1616 aaKnown RBP23.95■■□□□ 1.42
CCDC107-204ENST00000378409 ITGAEP38570 1179 aa23.94■■□□□ 1.42
CCDC107-204ENST00000378409 ABCC1P33527 1531 aa23.94■■□□□ 1.42
CCDC107-204ENST00000378409 SYCP2Q9BX26 1530 aa23.94■■□□□ 1.42
CCDC107-204ENST00000378409 PLEKHH2Q8IVE3 1493 aa23.94■■□□□ 1.42
CCDC107-204ENST00000378409 CROCC2H7BZ55 1655 aa23.93■■□□□ 1.42
CCDC107-204ENST00000378409 AEBP2Q6ZN18 517 aaPredicted RBP23.91■■□□□ 1.42
CCDC107-204ENST00000378409 ARHGEF5Q12774 1597 aa23.91■■□□□ 1.42
CCDC107-204ENST00000378409 ADGRL1O94910 1474 aa23.88■■□□□ 1.41
CCDC107-204ENST00000378409 NEO1Q92859 1461 aa23.88■■□□□ 1.41
CCDC107-204ENST00000378409 DAPK1P53355 1430 aa23.88■■□□□ 1.41
CCDC107-204ENST00000378409 AKNAQ7Z591 1439 aa23.88■■□□□ 1.41
CCDC107-204ENST00000378409 TEX14Q8IWB6 1497 aa23.87■■□□□ 1.41
CCDC107-204ENST00000378409 KIAA1107Q9UPP5 1409 aa23.87■■□□□ 1.41
CCDC107-204ENST00000378409 HNRNPMP52272 730 aaKnown RBP eCLIP23.87■■□□□ 1.41
CCDC107-204ENST00000378409 ARHGEF12Q9NZN5 1544 aa23.86■■□□□ 1.41
CCDC107-204ENST00000378409 MBD5Q9P267 1494 aa23.86■■□□□ 1.41
CCDC107-204ENST00000378409 ABCC5O15440 1437 aa23.84■■□□□ 1.41
CCDC107-204ENST00000378409 ADGBQ8N7X0 1667 aa23.84■■□□□ 1.41
CCDC107-204ENST00000378409 CCDC141Q6ZP82 1450 aa23.84■■□□□ 1.41
CCDC107-204ENST00000378409 PTPRKQ15262 1439 aa23.83■■□□□ 1.4
CCDC107-204ENST00000378409 SCAPERQ9BY12 1400 aa23.82■■□□□ 1.4
CCDC107-204ENST00000378409 TRAPPC8Q9Y2L5 1435 aa23.79■■□□□ 1.4
CCDC107-204ENST00000378409 SHANK2Q9UPX8 1470 aa23.79■■□□□ 1.4
CCDC107-204ENST00000378409 RSPH4AQ5TD94 716 aa23.78■■□□□ 1.4
CCDC107-204ENST00000378409 CHIC2Q9UKJ5 165 aa23.77■■□□□ 1.4
CCDC107-204ENST00000378409 RICTORQ6R327 1708 aa23.76■■□□□ 1.39
CCDC107-204ENST00000378409 MAST1Q9Y2H9 1570 aa23.76■■□□□ 1.39
CCDC107-204ENST00000378409 C9orf84Q5VXU9 1444 aa23.76■■□□□ 1.39
CCDC107-204ENST00000378409 TSPY4P0CV99 314 aa23.74■■□□□ 1.39
CCDC107-204ENST00000378409 TSPY10P0CW01 314 aa23.74■■□□□ 1.39
CCDC107-204ENST00000378409 POGZQ7Z3K3 1410 aa23.74■■□□□ 1.39
CCDC107-204ENST00000378409 ZNF518AQ6AHZ1 1483 aa23.74■■□□□ 1.39
CCDC107-204ENST00000378409 GCC2Q8IWJ2 1684 aa23.73■■□□□ 1.39
CCDC107-204ENST00000378409 DENND4BO75064 1496 aaPredicted RBP23.73■■□□□ 1.39
CCDC107-204ENST00000378409 ADGRL2O95490 1459 aa23.71■■□□□ 1.39
CCDC107-204ENST00000378409 AFAP1Q8N556 730 aa23.71■■□□□ 1.39
CCDC107-204ENST00000378409 KDM5CP41229 1560 aa23.7■■□□□ 1.38
CCDC107-204ENST00000378409 INO80Q9ULG1 1556 aaPredicted RBP23.7■■□□□ 1.38
CCDC107-204ENST00000378409 ROCK1Q13464 1354 aa23.69■■□□□ 1.38
CCDC107-204ENST00000378409 FRMPD1Q5SYB0 1578 aa23.69■■□□□ 1.38
CCDC107-204ENST00000378409 ZFYVE16Q7Z3T8 1539 aa23.69■■□□□ 1.38
CCDC107-204ENST00000378409 PLXNC1O60486 1568 aa23.68■■□□□ 1.38
CCDC107-204ENST00000378409 ATP7AQ04656 1500 aa23.68■■□□□ 1.38
CCDC107-204ENST00000378409 ANKRD30AQ9BXX3 1397 aa23.67■■□□□ 1.38
CCDC107-204ENST00000378409 SPAG9O60271 1321 aaKnown RBP23.67■■□□□ 1.38
CCDC107-204ENST00000378409 HECW2Q9P2P5 1572 aa23.67■■□□□ 1.38
CCDC107-204ENST00000378409 RRP7BPQ9NSQ0 103 aa23.67■■□□□ 1.38
CCDC107-204ENST00000378409 HFM1A2PYH4 1435 aa23.67■■□□□ 1.38
CCDC107-204ENST00000378409 KIDINS220Q9ULH0 1771 aa23.66■■□□□ 1.38
CCDC107-204ENST00000378409 NCOA1Q15788 1441 aa23.66■■□□□ 1.38
CCDC107-204ENST00000378409 RAPGEF3O95398 923 aa23.65■■□□□ 1.38
CCDC107-204ENST00000378409 RTEL1-TNFRSF6BF6WH68 1400 aa23.64■■□□□ 1.37
CCDC107-204ENST00000378409 NAIPQ13075 1403 aa23.64■■□□□ 1.37
CCDC107-204ENST00000378409 SETD5Q9C0A6 1442 aa23.63■■□□□ 1.37
CCDC107-204ENST00000378409 MYT1LQ9UL68 1186 aa23.63■■□□□ 1.37
CCDC107-204ENST00000378409 ZMYM4Q5VZL5 1548 aa23.61■■□□□ 1.37
CCDC107-204ENST00000378409 COL17A1Q9UMD9 1497 aaPredicted RBP23.61■■□□□ 1.37
CCDC107-204ENST00000378409 KDM6BO15054 1643 aa23.6■■□□□ 1.37
CCDC107-204ENST00000378409 KIF15Q9NS87 1388 aa23.6■■□□□ 1.37
CCDC107-204ENST00000378409 MLH3Q9UHC1 1453 aa23.6■■□□□ 1.37
CCDC107-204ENST00000378409 RAB3GAP2Q9H2M9 1393 aa23.58■■□□□ 1.37
CCDC107-204ENST00000378409 ABCA6Q8N139 1617 aa23.58■■□□□ 1.36
CCDC107-204ENST00000378409 DUOX2Q9NRD8 1548 aa23.55■■□□□ 1.36
CCDC107-204ENST00000378409 DIP2CQ9Y2E4 1556 aa23.53■■□□□ 1.36
CCDC107-204ENST00000378409 ANKRD50Q9ULJ7 1429 aa23.52■■□□□ 1.36
CCDC107-204ENST00000378409 MAGI2Q86UL8 1455 aa23.52■■□□□ 1.36
CCDC107-204ENST00000378409 YEATS2Q9ULM3 1422 aa23.5■■□□□ 1.35
CCDC107-204ENST00000378409 ERBINQ96RT1 1412 aa23.48■■□□□ 1.35
CCDC107-204ENST00000378409 ARHGEF40Q8TER5 1519 aa23.48■■□□□ 1.35
CCDC107-204ENST00000378409 A2MP01023 1474 aa23.47■■□□□ 1.35
CCDC107-204ENST00000378409 EIF2AK4Q9P2K8 1649 aaKnown RBP23.46■■□□□ 1.35
CCDC107-204ENST00000378409 HRCP23327 699 aa23.45■■□□□ 1.34
CCDC107-204ENST00000378409 DHX29Q7Z478 1369 aaKnown RBP23.44■■□□□ 1.34
CCDC107-204ENST00000378409 ATP10AO60312 1499 aa23.42■■□□□ 1.34
CCDC107-204ENST00000378409 UNC13BO14795 1591 aa23.41■■□□□ 1.34
CCDC107-204ENST00000378409 BCORL1Q5H9F3 1711 aa23.4■■□□□ 1.34
CCDC107-204ENST00000378409 REREQ9P2R6 1566 aa23.4■■□□□ 1.34
CCDC107-204ENST00000378409 TRIM52Q96A61 297 aa23.39■■□□□ 1.33
CCDC107-204ENST00000378409 DEPDC5O75140 1603 aa23.38■■□□□ 1.33
CCDC107-204ENST00000378409 ACIN1Q9UKV3 1341 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms