RNA–Protein interactions for RNA: ENST00000378402.9

PKHD1L1-201, Transcript of PKHD1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKHD1L1, Length 13,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1L1-201ENST00000378402 PHF14O94880 888 aa4.35□□□□□ -1.71
PKHD1L1-201ENST00000378402 KIF3AQ9Y496 699 aa4.35□□□□□ -1.71
PKHD1L1-201ENST00000378402 GTPBP4Q9BZE4 634 aaKnown RBP4.35□□□□□ -1.71
PKHD1L1-201ENST00000378402 BAZ1AQ9NRL2 1556 aaPredicted RBP4.35□□□□□ -1.71
PKHD1L1-201ENST00000378402 FKBP8Q14318 412 aa4.35□□□□□ -1.71
PKHD1L1-201ENST00000378402 DNTTIP2Q5QJE6 756 aaKnown RBP4.35□□□□□ -1.71
PKHD1L1-201ENST00000378402 VSIG10Q8N0Z9 540 aa4.35□□□□□ -1.71
PKHD1L1-201ENST00000378402 TSHZ2Q9NRE2 1034 aa4.35□□□□□ -1.71
PKHD1L1-201ENST00000378402 MYH16Q9H6N6 1097 aa4.34□□□□□ -1.71
PKHD1L1-201ENST00000378402 KIF16BQ96L93 1317 aa4.34□□□□□ -1.71
PKHD1L1-201ENST00000378402 HSPA5P11021 654 aaKnown RBP4.34□□□□□ -1.71
PKHD1L1-201ENST00000378402 TEX35Q5T0J7 233 aa4.34□□□□□ -1.71
PKHD1L1-201ENST00000378402 EIF3AQ14152 1382 aaKnown RBP4.34□□□□□ -1.71
PKHD1L1-201ENST00000378402 PLEKHG5O94827 1062 aa4.34□□□□□ -1.71
PKHD1L1-201ENST00000378402 NUTM1Q86Y26 1132 aa4.34□□□□□ -1.71
PKHD1L1-201ENST00000378402 PAIP2Q9BPZ3 127 aaKnown RBP4.34□□□□□ -1.71
PKHD1L1-201ENST00000378402 TUBB4BP68371 445 aa4.34□□□□□ -1.71
PKHD1L1-201ENST00000378402 ZCCHC6Q5VYS8 1495 aaKnown RBP4.33□□□□□ -1.72
PKHD1L1-201ENST00000378402 SETSIPP0DME0 302 aa4.33□□□□□ -1.72
PKHD1L1-201ENST00000378402 ATAD2Q6PL18 1390 aa4.33□□□□□ -1.72
PKHD1L1-201ENST00000378402 SARNPP82979 210 aaKnown RBP4.33□□□□□ -1.72
PKHD1L1-201ENST00000378402 RPAINQ86UA6 219 aa4.33□□□□□ -1.72
PKHD1L1-201ENST00000378402 KIAA2012Q0VF49 1180 aa4.33□□□□□ -1.72
PKHD1L1-201ENST00000378402 SRPK2P78362 688 aaKnown RBP4.33□□□□□ -1.72
PKHD1L1-201ENST00000378402 SMAP1Q8IYB5 467 aaPredicted RBP4.33□□□□□ -1.72
PKHD1L1-201ENST00000378402 DIAPH3Q9NSV4 1193 aa4.33□□□□□ -1.72
PKHD1L1-201ENST00000378402 CALCOCO1Q9P1Z2 691 aa4.33□□□□□ -1.72
PKHD1L1-201ENST00000378402 CLIP1P30622 1438 aa4.32□□□□□ -1.72
PKHD1L1-201ENST00000378402 GBP4Q96PP9 640 aa4.32□□□□□ -1.72
PKHD1L1-201ENST00000378402 ZMYM3Q14202 1370 aa4.32□□□□□ -1.72
PKHD1L1-201ENST00000378402 TUBB4AP04350 444 aa4.32□□□□□ -1.72
PKHD1L1-201ENST00000378402 POLR3GO15318 223 aaPredicted RBP4.32□□□□□ -1.72
PKHD1L1-201ENST00000378402 MRE11P49959 708 aa4.32□□□□□ -1.72
PKHD1L1-201ENST00000378402 AEBP1Q8IUX7 1158 aa4.32□□□□□ -1.72
PKHD1L1-201ENST00000378402 LIG1P18858 919 aa4.32□□□□□ -1.72
PKHD1L1-201ENST00000378402 UTP14CQ5TAP6 766 aaKnown RBP4.32□□□□□ -1.72
PKHD1L1-201ENST00000378402 TMX4Q9H1E5 349 aaPredicted RBP4.32□□□□□ -1.72
PKHD1L1-201ENST00000378402 CEP164Q9UPV0 1460 aa4.32□□□□□ -1.72
PKHD1L1-201ENST00000378402 U2SURPO15042 1029 aaKnown RBP4.32□□□□□ -1.72
PKHD1L1-201ENST00000378402 PDE3BQ13370 1112 aa4.31□□□□□ -1.72
PKHD1L1-201ENST00000378402 ROCK2O75116 1388 aaKnown RBP4.31□□□□□ -1.72
PKHD1L1-201ENST00000378402 A6NNZ2 444 aa4.31□□□□□ -1.72
PKHD1L1-201ENST00000378402 TUBB8Q3ZCM7 444 aa4.31□□□□□ -1.72
PKHD1L1-201ENST00000378402 CLCN1P35523 988 aa4.31□□□□□ -1.72
PKHD1L1-201ENST00000378402 FGD1P98174 961 aa4.31□□□□□ -1.72
PKHD1L1-201ENST00000378402 RNF20Q5VTR2 975 aa4.3□□□□□ -1.72
PKHD1L1-201ENST00000378402 CFAP65Q6ZU64 1925 aaKnown RBP4.3□□□□□ -1.72
PKHD1L1-201ENST00000378402 DYNC1I1O14576 645 aa4.3□□□□□ -1.72
PKHD1L1-201ENST00000378402 CHMP3Q9Y3E7 222 aa4.3□□□□□ -1.72
PKHD1L1-201ENST00000378402 PLCD4Q9BRC7 762 aa4.3□□□□□ -1.72
PKHD1L1-201ENST00000378402 AKNAQ7Z591 1439 aa4.29□□□□□ -1.72
PKHD1L1-201ENST00000378402 KIF1CO43896 1103 aaKnown RBP4.29□□□□□ -1.72
PKHD1L1-201ENST00000378402 TRDNQ13061 729 aa4.29□□□□□ -1.72
PKHD1L1-201ENST00000378402 YY1AP1Q9H869 796 aa4.29□□□□□ -1.72
PKHD1L1-201ENST00000378402 CHMP4CQ96CF2 233 aa4.29□□□□□ -1.72
PKHD1L1-201ENST00000378402 ANKRD30AQ9BXX3 1397 aa4.29□□□□□ -1.72
PKHD1L1-201ENST00000378402 GOLGA6L4A6NEF3 574 aa4.29□□□□□ -1.72
PKHD1L1-201ENST00000378402 CAGE1Q8TC20 777 aa4.29□□□□□ -1.72
PKHD1L1-201ENST00000378402 FHAD1B1AJZ9 1412 aa4.29□□□□□ -1.72
PKHD1L1-201ENST00000378402 HSP90B2PQ58FF3 399 aa4.28□□□□□ -1.72
PKHD1L1-201ENST00000378402 TULP1O00294 542 aaPredicted RBP4.28□□□□□ -1.72
PKHD1L1-201ENST00000378402 MAPK8IP3Q9UPT6 1336 aa4.28□□□□□ -1.72
PKHD1L1-201ENST00000378402 IRX3P78415 501 aaPredicted RBP4.28□□□□□ -1.72
PKHD1L1-201ENST00000378402 RBM26Q5T8P6 1007 aaKnown RBP4.28□□□□□ -1.72
PKHD1L1-201ENST00000378402 BCL11BQ9C0K0 894 aaPredicted RBP4.28□□□□□ -1.72
PKHD1L1-201ENST00000378402 SLC20A2Q08357 652 aa4.28□□□□□ -1.72
PKHD1L1-201ENST00000378402 DEF6Q9H4E7 631 aa4.28□□□□□ -1.72
PKHD1L1-201ENST00000378402 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.28□□□□□ -1.72
PKHD1L1-201ENST00000378402 PRIMPOLQ96LW4 560 aa4.28□□□□□ -1.72
PKHD1L1-201ENST00000378402 BRMS1Q9HCU9 246 aa4.28□□□□□ -1.72
PKHD1L1-201ENST00000378402 FTSJ3Q8IY81 847 aaKnown RBP4.28□□□□□ -1.72
PKHD1L1-201ENST00000378402 FEZ1Q99689 392 aa4.28□□□□□ -1.72
PKHD1L1-201ENST00000378402 PLEKHH2Q8IVE3 1493 aa4.28□□□□□ -1.73
PKHD1L1-201ENST00000378402 TEX2Q8IWB9 1127 aa4.28□□□□□ -1.73
PKHD1L1-201ENST00000378402 KIF2AO00139 706 aaPredicted RBP4.27□□□□□ -1.73
PKHD1L1-201ENST00000378402 IPO4Q8TEX9 1081 aaKnown RBP4.27□□□□□ -1.73
PKHD1L1-201ENST00000378402 SCRIBQ14160 1630 aa4.27□□□□□ -1.73
PKHD1L1-201ENST00000378402 V9GYY5 206 aaPredicted RBP4.27□□□□□ -1.73
PKHD1L1-201ENST00000378402 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.27□□□□□ -1.73
PKHD1L1-201ENST00000378402 FAM184AQ8NB25 1140 aa4.27□□□□□ -1.73
PKHD1L1-201ENST00000378402 ARGLU1Q9NWB6 273 aaPredicted RBP4.27□□□□□ -1.73
PKHD1L1-201ENST00000378402 DHX29Q7Z478 1369 aaKnown RBP4.27□□□□□ -1.73
PKHD1L1-201ENST00000378402 RB1CC1Q8TDY2 1594 aa4.27□□□□□ -1.73
PKHD1L1-201ENST00000378402 ACBD3Q9H3P7 528 aa4.27□□□□□ -1.73
PKHD1L1-201ENST00000378402 RALBP1Q15311 655 aa4.27□□□□□ -1.73
PKHD1L1-201ENST00000378402 SCAPERQ9BY12 1400 aa4.27□□□□□ -1.73
PKHD1L1-201ENST00000378402 TNIKQ9UKE5 1360 aa4.27□□□□□ -1.73
PKHD1L1-201ENST00000378402 ZMYND15Q9H091 742 aa4.27□□□□□ -1.73
PKHD1L1-201ENST00000378402 PRPF40AO75400 957 aaKnown RBP4.27□□□□□ -1.73
PKHD1L1-201ENST00000378402 BAZ1BQ9UIG0 1483 aaKnown RBP4.27□□□□□ -1.73
PKHD1L1-201ENST00000378402 MFAP1P55081 439 aaKnown RBP4.26□□□□□ -1.73
PKHD1L1-201ENST00000378402 RABEP1Q15276 862 aa4.26□□□□□ -1.73
PKHD1L1-201ENST00000378402 CCDC173Q0VFZ6 552 aa4.26□□□□□ -1.73
PKHD1L1-201ENST00000378402 ITGB1BP2Q9UKP3 347 aa4.26□□□□□ -1.73
PKHD1L1-201ENST00000378402 ZBED9Q6R2W3 1325 aa4.26□□□□□ -1.73
PKHD1L1-201ENST00000378402 TUBBP07437 444 aa4.26□□□□□ -1.73
PKHD1L1-201ENST00000378402 WASHC2CQ9Y4E1 1318 aa4.26□□□□□ -1.73
PKHD1L1-201ENST00000378402 MEX3CQ5U5Q3 659 aaKnown RBP4.26□□□□□ -1.73
PKHD1L1-201ENST00000378402 TPM1P09493 284 aa4.26□□□□□ -1.73
PKHD1L1-201ENST00000378402 GOLGA6L10A6NI86 522 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms