RNA–Protein interactions for RNA: ENST00000378308.6

USP9X-202, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP9X, Length 8,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-202ENST00000378308 HSP90B1P14625 803 aaKnown RBP16.92■□□□□ 0.3
USP9X-202ENST00000378308 RSF1Q96T23 1441 aaPredicted RBP16.92■□□□□ 0.3
USP9X-202ENST00000378308 ERCC6Q03468 1493 aa16.92■□□□□ 0.3
USP9X-202ENST00000378308 CSB-PGBD3P0DP91 1061 aa16.92■□□□□ 0.3
USP9X-202ENST00000378308 ZCCHC6Q5VYS8 1495 aaKnown RBP16.91■□□□□ 0.3
USP9X-202ENST00000378308 RASSF8Q8NHQ8 419 aa16.91■□□□□ 0.3
USP9X-202ENST00000378308 GORABQ5T7V8 394 aa16.9■□□□□ 0.3
USP9X-202ENST00000378308 TAF7LQ5H9L4 462 aa16.9■□□□□ 0.3
USP9X-202ENST00000378308 CFDP1Q9UEE9 299 aaPredicted RBP16.89■□□□□ 0.29
USP9X-202ENST00000378308 CEP89Q96ST8 783 aa16.88■□□□□ 0.29
USP9X-202ENST00000378308 WWC1Q8IX03 1113 aa16.87■□□□□ 0.29
USP9X-202ENST00000378308 HDGFP51858 240 aaKnown RBP16.86■□□□□ 0.29
USP9X-202ENST00000378308 GOLGA6L1Q8N7Z2 621 aa16.86■□□□□ 0.29
USP9X-202ENST00000378308 TPM4P67936 248 aa16.85■□□□□ 0.29
USP9X-202ENST00000378308 NOP58Q9Y2X3 529 aaKnown RBP16.85■□□□□ 0.29
USP9X-202ENST00000378308 KANK1Q14678 1352 aa16.85■□□□□ 0.29
USP9X-202ENST00000378308 CNKSR2Q8WXI2 1034 aa16.85■□□□□ 0.29
USP9X-202ENST00000378308 STK26Q9P289 416 aa16.84■□□□□ 0.29
USP9X-202ENST00000378308 FRAT2O75474 233 aaPredicted RBP16.82■□□□□ 0.28
USP9X-202ENST00000378308 GPATCH3Q96I76 525 aa16.82■□□□□ 0.28
USP9X-202ENST00000378308 TNNT3P45378 269 aaPredicted RBP16.81■□□□□ 0.28
USP9X-202ENST00000378308 MARCH6O60337 910 aa16.8■□□□□ 0.28
USP9X-202ENST00000378308 B4GALNT3Q6L9W6 998 aa16.8■□□□□ 0.28
USP9X-202ENST00000378308 EIF4G1Q04637 1599 aaKnown RBP16.79■□□□□ 0.28
USP9X-202ENST00000378308 PES1O00541 588 aaKnown RBP16.79■□□□□ 0.28
USP9X-202ENST00000378308 HTATSF1O43719 755 aaKnown RBP16.79■□□□□ 0.28
USP9X-202ENST00000378308 MORC1Q86VD1 984 aa16.79■□□□□ 0.28
USP9X-202ENST00000378308 CCDC34Q96HJ3 373 aa16.79■□□□□ 0.28
USP9X-202ENST00000378308 CFAP44Q96MT7 982 aa16.79■□□□□ 0.28
USP9X-202ENST00000378308 CLIP1P30622 1438 aa16.78■□□□□ 0.28
USP9X-202ENST00000378308 TRIM6-TRIM34B2RNG4 842 aa16.78■□□□□ 0.28
USP9X-202ENST00000378308 GZF1Q9H116 711 aaPredicted RBP16.78■□□□□ 0.28
USP9X-202ENST00000378308 TCEAL9Q9UHQ7 104 aa16.78■□□□□ 0.28
USP9X-202ENST00000378308 TMF1P82094 1093 aa16.76■□□□□ 0.27
USP9X-202ENST00000378308 GTF2E1P29083 439 aaPredicted RBP16.75■□□□□ 0.27
USP9X-202ENST00000378308 DCAF11Q8TEB1 546 aa16.74■□□□□ 0.27
USP9X-202ENST00000378308 TOMM22Q9NS69 142 aa16.73■□□□□ 0.27
USP9X-202ENST00000378308 SYAP1Q96A49 352 aaPredicted RBP16.73■□□□□ 0.27
USP9X-202ENST00000378308 ITPRIPQ8IWB1 547 aa16.73■□□□□ 0.27
USP9X-202ENST00000378308 RAD21O60216 631 aa16.72■□□□□ 0.27
USP9X-202ENST00000378308 SPAG9O60271 1321 aaKnown RBP16.72■□□□□ 0.27
USP9X-202ENST00000378308 PPP4R2Q9NY27 417 aa16.72■□□□□ 0.27
USP9X-202ENST00000378308 MSH5O43196 834 aa16.71■□□□□ 0.27
USP9X-202ENST00000378308 GBP4Q96PP9 640 aa16.71■□□□□ 0.27
USP9X-202ENST00000378308 HDGFL2Q7Z4V5 671 aaPredicted RBP16.71■□□□□ 0.27
USP9X-202ENST00000378308 PATL2C9JE40 543 aaKnown RBP16.7■□□□□ 0.26
USP9X-202ENST00000378308 IPO8O15397 1037 aaKnown RBP16.7■□□□□ 0.26
USP9X-202ENST00000378308 TPD52L1Q16890 204 aaPredicted RBP16.7■□□□□ 0.26
USP9X-202ENST00000378308 CCDC180Q9P1Z9 1646 aa16.69■□□□□ 0.26
USP9X-202ENST00000378308 DCAF1Q9Y4B6 1507 aa16.69■□□□□ 0.26
USP9X-202ENST00000378308 TPM3P06753 285 aa16.68■□□□□ 0.26
USP9X-202ENST00000378308 TRIM34Q9BYJ4 488 aa16.68■□□□□ 0.26
USP9X-202ENST00000378308 NOL8Q76FK4 1167 aaKnown RBP16.68■□□□□ 0.26
USP9X-202ENST00000378308 USP35Q9P2H5 1018 aa16.67■□□□□ 0.26
USP9X-202ENST00000378308 CTDP1Q9Y5B0 961 aaPredicted RBP16.67■□□□□ 0.26
USP9X-202ENST00000378308 PTMSP20962 102 aa16.66■□□□□ 0.26
USP9X-202ENST00000378308 CALD1Q05682 793 aaKnown RBP16.65■□□□□ 0.26
USP9X-202ENST00000378308 SLC4A10Q6U841 1118 aa16.65■□□□□ 0.26
USP9X-202ENST00000378308 TSR1Q2NL82 804 aaKnown RBP16.65■□□□□ 0.26
USP9X-202ENST00000378308 CWC22Q9HCG8 908 aaKnown RBP16.65■□□□□ 0.26
USP9X-202ENST00000378308 STK31Q9BXU1 1019 aa16.64■□□□□ 0.25
USP9X-202ENST00000378308 GGT6Q6P531 493 aa16.64■□□□□ 0.25
USP9X-202ENST00000378308 CSPP1Q1MSJ5 1256 aa16.63■□□□□ 0.25
USP9X-202ENST00000378308 SETQ01105 290 aaPredicted RBP16.63■□□□□ 0.25
USP9X-202ENST00000378308 SLKQ9H2G2 1235 aaPredicted RBP16.62■□□□□ 0.25
USP9X-202ENST00000378308 SF3A1Q15459 793 aaKnown RBP16.62■□□□□ 0.25
USP9X-202ENST00000378308 U2AF1L5P0DN76 240 aaPredicted RBP16.61■□□□□ 0.25
USP9X-202ENST00000378308 U2AF1Q01081 240 aaKnown RBP eCLIP16.61■□□□□ 0.251e-11■■■■■ 41.9
USP9X-202ENST00000378308 CCAR2Q8N163 923 aaKnown RBP16.6■□□□□ 0.25
USP9X-202ENST00000378308 KLHL34Q8N239 644 aa16.6■□□□□ 0.25
USP9X-202ENST00000378308 TPM2P07951 284 aa16.59■□□□□ 0.25
USP9X-202ENST00000378308 LTV1Q96GA3 475 aaPredicted RBP16.59■□□□□ 0.25
USP9X-202ENST00000378308 FBXW7Q969H0 707 aa16.59■□□□□ 0.25
USP9X-202ENST00000378308 KIF16BQ96L93 1317 aa16.59■□□□□ 0.25
USP9X-202ENST00000378308 MEX3CQ5U5Q3 659 aaKnown RBP16.59■□□□□ 0.25
USP9X-202ENST00000378308 CCNB3Q8WWL7 1395 aa16.59■□□□□ 0.25
USP9X-202ENST00000378308 H3BQV1 296 aa16.58■□□□□ 0.25
USP9X-202ENST00000378308 IFFO2Q5TF58 517 aa16.58■□□□□ 0.25
USP9X-202ENST00000378308 GOLGA3Q08378 1498 aa16.58■□□□□ 0.25
USP9X-202ENST00000378308 FOXD4L5Q5VV16 416 aaPredicted RBP16.58■□□□□ 0.25
USP9X-202ENST00000378308 FOXD4L4Q8WXT5 416 aaPredicted RBP16.58■□□□□ 0.25
USP9X-202ENST00000378308 FOXD4L1Q9NU39 408 aa16.58■□□□□ 0.25
USP9X-202ENST00000378308 EVA1CP58658 441 aa16.58■□□□□ 0.24
USP9X-202ENST00000378308 MFAP1P55081 439 aaKnown RBP16.58■□□□□ 0.24
USP9X-202ENST00000378308 AKAP17AQ02040 695 aaKnown RBP16.58■□□□□ 0.24
USP9X-202ENST00000378308 PHF14O94880 888 aa16.57■□□□□ 0.24
USP9X-202ENST00000378308 PHF23Q9BUL5 403 aaPredicted RBP16.57■□□□□ 0.24
USP9X-202ENST00000378308 NOL10Q9BSC4 688 aaKnown RBP16.56■□□□□ 0.24
USP9X-202ENST00000378308 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.55■□□□□ 0.244e-8■■■■■ 155.5
USP9X-202ENST00000378308 AMOTL1Q8IY63 956 aa16.55■□□□□ 0.24
USP9X-202ENST00000378308 KTN1Q86UP2 1357 aaKnown RBP16.54■□□□□ 0.24
USP9X-202ENST00000378308 PCMTD1Q96MG8 357 aaPredicted RBP16.54■□□□□ 0.24
USP9X-202ENST00000378308 AMPHP49418 695 aa16.54■□□□□ 0.24
USP9X-202ENST00000378308 NGDNQ8NEJ9 315 aaKnown RBP16.54■□□□□ 0.24
USP9X-202ENST00000378308 SIN3AQ96ST3 1273 aa16.54■□□□□ 0.24
USP9X-202ENST00000378308 ROCK2O75116 1388 aaKnown RBP16.53■□□□□ 0.24
USP9X-202ENST00000378308 DEKP35659 375 aaKnown RBP16.53■□□□□ 0.24
USP9X-202ENST00000378308 SMC4Q9NTJ3 1288 aa16.53■□□□□ 0.24
USP9X-202ENST00000378308 CHMP4AQ9BY43 222 aa16.53■□□□□ 0.24
USP9X-202ENST00000378308 RWDD1Q9H446 243 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms