RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 MYO5CQ9NQX4 1742 aa18.21■□□□□ 0.51
DEPDC4-202ENST00000378244 AKNAQ7Z591 1439 aa18.2■□□□□ 0.5
DEPDC4-202ENST00000378244 KDM6BO15054 1643 aa18.2■□□□□ 0.5
DEPDC4-202ENST00000378244 SUPT6HQ7KZ85 1726 aaKnown RBP18.2■□□□□ 0.5
DEPDC4-202ENST00000378244 ZNF644Q9H582 1327 aaPredicted RBP18.19■□□□□ 0.5
DEPDC4-202ENST00000378244 NEO1Q92859 1461 aa18.18■□□□□ 0.5
DEPDC4-202ENST00000378244 CDC42BPAQ5VT25 1732 aa18.17■□□□□ 0.5
DEPDC4-202ENST00000378244 ADGRL1O94910 1474 aa18.16■□□□□ 0.5
DEPDC4-202ENST00000378244 SCAPERQ9BY12 1400 aa18.16■□□□□ 0.5
DEPDC4-202ENST00000378244 CDC42BPBQ9Y5S2 1711 aa18.16■□□□□ 0.5
DEPDC4-202ENST00000378244 PREX2Q70Z35 1606 aa18.16■□□□□ 0.5
DEPDC4-202ENST00000378244 PHLDB1Q86UU1 1377 aa18.15■□□□□ 0.5
DEPDC4-202ENST00000378244 HNRNPMP52272 730 aaKnown RBP eCLIP18.15■□□□□ 0.5
DEPDC4-202ENST00000378244 AFAP1Q8N556 730 aa18.14■□□□□ 0.49
DEPDC4-202ENST00000378244 ARAP3Q8WWN8 1544 aa18.13■□□□□ 0.49
DEPDC4-202ENST00000378244 MYT1LQ9UL68 1186 aa18.11■□□□□ 0.49
DEPDC4-202ENST00000378244 DENND4BO75064 1496 aaPredicted RBP18.11■□□□□ 0.49
DEPDC4-202ENST00000378244 CFAP74Q9C0B2 1584 aa18.1■□□□□ 0.49
DEPDC4-202ENST00000378244 MYOM3Q5VTT5 1437 aa18.1■□□□□ 0.49
DEPDC4-202ENST00000378244 ARHGEF12Q9NZN5 1544 aa18.09■□□□□ 0.49
DEPDC4-202ENST00000378244 SAMD9LQ8IVG5 1584 aa18.08■□□□□ 0.49
DEPDC4-202ENST00000378244 ITSN2Q9NZM3 1697 aa18.08■□□□□ 0.48
DEPDC4-202ENST00000378244 TRAPPC8Q9Y2L5 1435 aa18.07■□□□□ 0.48
DEPDC4-202ENST00000378244 SYCP2Q9BX26 1530 aa18.06■□□□□ 0.48
DEPDC4-202ENST00000378244 POGZQ7Z3K3 1410 aa18.05■□□□□ 0.48
DEPDC4-202ENST00000378244 ABCC1P33527 1531 aa18.05■□□□□ 0.48
DEPDC4-202ENST00000378244 FAM50AQ14320 339 aaKnown RBP18.05■□□□□ 0.48
DEPDC4-202ENST00000378244 CAMSAP2Q08AD1 1489 aa18.04■□□□□ 0.48
DEPDC4-202ENST00000378244 FGD6Q6ZV73 1430 aa18.03■□□□□ 0.48
DEPDC4-202ENST00000378244 FRMPD1Q5SYB0 1578 aa18.03■□□□□ 0.48
DEPDC4-202ENST00000378244 ZNF518AQ6AHZ1 1483 aa18.02■□□□□ 0.48
DEPDC4-202ENST00000378244 MIA2Q96PC5 1412 aa18.02■□□□□ 0.48
DEPDC4-202ENST00000378244 KIAA1107Q9UPP5 1409 aa18.01■□□□□ 0.47
DEPDC4-202ENST00000378244 PLEKHH2Q8IVE3 1493 aa18.01■□□□□ 0.47
DEPDC4-202ENST00000378244 RICTORQ6R327 1708 aa18■□□□□ 0.47
DEPDC4-202ENST00000378244 SPAG9O60271 1321 aaKnown RBP17.99■□□□□ 0.47
DEPDC4-202ENST00000378244 YEATS2Q9ULM3 1422 aa17.99■□□□□ 0.47
DEPDC4-202ENST00000378244 MBD5Q9P267 1494 aa17.99■□□□□ 0.47
DEPDC4-202ENST00000378244 ITGAEP38570 1179 aa17.97■□□□□ 0.47
DEPDC4-202ENST00000378244 PTPN23Q9H3S7 1636 aa17.96■□□□□ 0.47
DEPDC4-202ENST00000378244 TSPY4P0CV99 314 aa17.96■□□□□ 0.47
DEPDC4-202ENST00000378244 TSPY10P0CW01 314 aa17.96■□□□□ 0.47
DEPDC4-202ENST00000378244 ARID4BQ4LE39 1312 aaPredicted RBP17.95■□□□□ 0.46
DEPDC4-202ENST00000378244 CHIC2Q9UKJ5 165 aa17.94■□□□□ 0.46
DEPDC4-202ENST00000378244 KDM5CP41229 1560 aa17.93■□□□□ 0.46
DEPDC4-202ENST00000378244 CCDC141Q6ZP82 1450 aa17.93■□□□□ 0.46
DEPDC4-202ENST00000378244 RSPH4AQ5TD94 716 aa17.93■□□□□ 0.46
DEPDC4-202ENST00000378244 ZMYM4Q5VZL5 1548 aa17.93■□□□□ 0.46
DEPDC4-202ENST00000378244 ZFYVE16Q7Z3T8 1539 aa17.92■□□□□ 0.46
DEPDC4-202ENST00000378244 MAGI2Q86UL8 1455 aa17.91■□□□□ 0.46
DEPDC4-202ENST00000378244 MLH3Q9UHC1 1453 aa17.91■□□□□ 0.46
DEPDC4-202ENST00000378244 TCOF1Q13428 1488 aaKnown RBP17.9■□□□□ 0.46
DEPDC4-202ENST00000378244 HECW2Q9P2P5 1572 aa17.9■□□□□ 0.46
DEPDC4-202ENST00000378244 ABCC5O15440 1437 aa17.89■□□□□ 0.45
DEPDC4-202ENST00000378244 MLECQ14165 292 aa17.89■□□□□ 0.45
DEPDC4-202ENST00000378244 ATP7AQ04656 1500 aa17.88■□□□□ 0.45
DEPDC4-202ENST00000378244 DAPK1P53355 1430 aa17.87■□□□□ 0.45
DEPDC4-202ENST00000378244 ARHGEF5Q12774 1597 aa17.87■□□□□ 0.45
DEPDC4-202ENST00000378244 ARHGEF40Q8TER5 1519 aa17.87■□□□□ 0.45
DEPDC4-202ENST00000378244 KIDINS220Q9ULH0 1771 aa17.87■□□□□ 0.45
DEPDC4-202ENST00000378244 C9orf84Q5VXU9 1444 aa17.87■□□□□ 0.45
DEPDC4-202ENST00000378244 ATP10AO60312 1499 aa17.86■□□□□ 0.45
DEPDC4-202ENST00000378244 RRP7BPQ9NSQ0 103 aa17.86■□□□□ 0.45
DEPDC4-202ENST00000378244 ABCA6Q8N139 1617 aa17.85■□□□□ 0.45
DEPDC4-202ENST00000378244 DIP2CQ9Y2E4 1556 aa17.84■□□□□ 0.45
DEPDC4-202ENST00000378244 RRBP1Q9P2E9 1410 aaKnown RBP17.84■□□□□ 0.45
DEPDC4-202ENST00000378244 INO80Q9ULG1 1556 aaPredicted RBP17.83■□□□□ 0.45
DEPDC4-202ENST00000378244 RTEL1-TNFRSF6BF6WH68 1400 aa17.83■□□□□ 0.44
DEPDC4-202ENST00000378244 DNMT1P26358 1616 aaKnown RBP17.82■□□□□ 0.44
DEPDC4-202ENST00000378244 PTPRKQ15262 1439 aa17.82■□□□□ 0.44
DEPDC4-202ENST00000378244 SIGLEC1Q9BZZ2 1709 aa17.8■□□□□ 0.44
DEPDC4-202ENST00000378244 A2MP01023 1474 aa17.79■□□□□ 0.44
DEPDC4-202ENST00000378244 KDM4FA0A1W2PPD8 638 aa17.79■□□□□ 0.44
DEPDC4-202ENST00000378244 GGT6Q6P531 493 aa17.78■□□□□ 0.44
DEPDC4-202ENST00000378244 KIF3BO15066 747 aa17.78■□□□□ 0.44
DEPDC4-202ENST00000378244 KIF15Q9NS87 1388 aa17.78■□□□□ 0.44
DEPDC4-202ENST00000378244 ANKRD30AQ9BXX3 1397 aa17.77■□□□□ 0.44
DEPDC4-202ENST00000378244 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.77■□□□□ 0.44
DEPDC4-202ENST00000378244 SHANK2Q9UPX8 1470 aa17.77■□□□□ 0.43
DEPDC4-202ENST00000378244 PLPPR3Q6T4P5 718 aa17.76■□□□□ 0.43
DEPDC4-202ENST00000378244 DHX29Q7Z478 1369 aaKnown RBP17.76■□□□□ 0.43
DEPDC4-202ENST00000378244 NCOA1Q15788 1441 aa17.76■□□□□ 0.43
DEPDC4-202ENST00000378244 CROCC2H7BZ55 1655 aa17.75■□□□□ 0.43
DEPDC4-202ENST00000378244 MAST1Q9Y2H9 1570 aa17.75■□□□□ 0.43
DEPDC4-202ENST00000378244 ADGBQ8N7X0 1667 aa17.72■□□□□ 0.43
DEPDC4-202ENST00000378244 ESF1Q9H501 851 aaKnown RBP17.71■□□□□ 0.43
DEPDC4-202ENST00000378244 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.7■□□□□ 0.42
DEPDC4-202ENST00000378244 PLXNC1O60486 1568 aa17.7■□□□□ 0.42
DEPDC4-202ENST00000378244 REREQ9P2R6 1566 aa17.7■□□□□ 0.42
DEPDC4-202ENST00000378244 ADGRL2O95490 1459 aa17.69■□□□□ 0.42
DEPDC4-202ENST00000378244 AGLP35573 1532 aa17.68■□□□□ 0.42
DEPDC4-202ENST00000378244 DUOX2Q9NRD8 1548 aa17.68■□□□□ 0.42
DEPDC4-202ENST00000378244 BCORL1Q5H9F3 1711 aa17.68■□□□□ 0.42
DEPDC4-202ENST00000378244 ROCK1Q13464 1354 aa17.67■□□□□ 0.42
DEPDC4-202ENST00000378244 ANKRD50Q9ULJ7 1429 aa17.66■□□□□ 0.42
DEPDC4-202ENST00000378244 CEBPAP49715 358 aaPredicted RBP17.66■□□□□ 0.42
DEPDC4-202ENST00000378244 AEBP2Q6ZN18 517 aaPredicted RBP17.65■□□□□ 0.42
DEPDC4-202ENST00000378244 MADDQ8WXG6 1647 aa17.65■□□□□ 0.42
DEPDC4-202ENST00000378244 WASHC2CQ9Y4E1 1318 aa17.64■□□□□ 0.41
DEPDC4-202ENST00000378244 ERBINQ96RT1 1412 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms