RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 EFCAB2Q5VUJ9 269 aa22.86■■□□□ 1.25
CNTNAP3-204ENST00000377656 SMARCA2P51531 1590 aa22.86■■□□□ 1.25
CNTNAP3-204ENST00000377656 PTMAP06454 111 aaKnown RBP22.84■■□□□ 1.25
CNTNAP3-204ENST00000377656 MPHOSPH9Q99550 1183 aa22.83■■□□□ 1.25
CNTNAP3-204ENST00000377656 STK26Q9P289 416 aa22.82■■□□□ 1.24
CNTNAP3-204ENST00000377656 NUP155O75694 1391 aa22.82■■□□□ 1.24
CNTNAP3-204ENST00000377656 NPHP1O15259 732 aa22.81■■□□□ 1.24
CNTNAP3-204ENST00000377656 RAB3GAP2Q9H2M9 1393 aa22.81■■□□□ 1.24
CNTNAP3-204ENST00000377656 KTN1Q86UP2 1357 aaKnown RBP22.81■■□□□ 1.24
CNTNAP3-204ENST00000377656 TPRNQ4KMQ1 711 aa22.8■■□□□ 1.24
CNTNAP3-204ENST00000377656 FGD1P98174 961 aa22.8■■□□□ 1.24
CNTNAP3-204ENST00000377656 HDGFL2Q7Z4V5 671 aaPredicted RBP22.8■■□□□ 1.24
CNTNAP3-204ENST00000377656 KCNJ4P48050 445 aa22.79■■□□□ 1.24
CNTNAP3-204ENST00000377656 ANKRD30AQ9BXX3 1397 aa22.79■■□□□ 1.24
CNTNAP3-204ENST00000377656 HSP90AB1P08238 724 aaKnown RBP22.78■■□□□ 1.24
CNTNAP3-204ENST00000377656 NOP58Q9Y2X3 529 aaKnown RBP22.76■■□□□ 1.23
CNTNAP3-204ENST00000377656 RTF1Q92541 710 aaKnown RBP22.75■■□□□ 1.23
CNTNAP3-204ENST00000377656 ROCK2O75116 1388 aaKnown RBP22.74■■□□□ 1.23
CNTNAP3-204ENST00000377656 RALBP1Q15311 655 aa22.71■■□□□ 1.23
CNTNAP3-204ENST00000377656 U2AF1L5P0DN76 240 aaPredicted RBP22.71■■□□□ 1.23
CNTNAP3-204ENST00000377656 U2AF1Q01081 240 aaKnown RBP eCLIP22.71■■□□□ 1.23
CNTNAP3-204ENST00000377656 IPO8O15397 1037 aaKnown RBP22.7■■□□□ 1.22
CNTNAP3-204ENST00000377656 ERICH6BQ5W0A0 696 aa22.7■■□□□ 1.22
CNTNAP3-204ENST00000377656 GOLGA2Q08379 1002 aa22.69■■□□□ 1.22
CNTNAP3-204ENST00000377656 DNTTIP2Q5QJE6 756 aaKnown RBP22.69■■□□□ 1.22
CNTNAP3-204ENST00000377656 RAPGEF2Q9Y4G8 1499 aa22.69■■□□□ 1.22
CNTNAP3-204ENST00000377656 KIF3BO15066 747 aa22.69■■□□□ 1.22
CNTNAP3-204ENST00000377656 TAOK2Q9UL54 1235 aa22.67■■□□□ 1.22
CNTNAP3-204ENST00000377656 HSCBQ8IWL3 235 aa22.67■■□□□ 1.22
CNTNAP3-204ENST00000377656 RSPH4AQ5TD94 716 aa22.66■■□□□ 1.22
CNTNAP3-204ENST00000377656 PLCB2Q00722 1185 aa22.66■■□□□ 1.22
CNTNAP3-204ENST00000377656 NAP1L2Q9ULW6 460 aaPredicted RBP22.66■■□□□ 1.22
CNTNAP3-204ENST00000377656 CALD1Q05682 793 aaKnown RBP22.66■■□□□ 1.22
CNTNAP3-204ENST00000377656 CADPSQ9ULU8 1353 aa22.65■■□□□ 1.22
CNTNAP3-204ENST00000377656 CFAP44Q96MT7 982 aa22.65■■□□□ 1.22
CNTNAP3-204ENST00000377656 L3MBTL2Q969R5 705 aa22.64■■□□□ 1.22
CNTNAP3-204ENST00000377656 HNRNPMP52272 730 aaKnown RBP eCLIP22.63■■□□□ 1.21
CNTNAP3-204ENST00000377656 RCAN3Q9UKA8 241 aa22.63■■□□□ 1.21
CNTNAP3-204ENST00000377656 SMARCA4P51532 1647 aa22.63■■□□□ 1.21
CNTNAP3-204ENST00000377656 MCCP23508 829 aa22.63■■□□□ 1.21
CNTNAP3-204ENST00000377656 DHX57Q6P158 1386 aaKnown RBP22.63■■□□□ 1.21
CNTNAP3-204ENST00000377656 RUSC2Q8N2Y8 1516 aa22.62■■□□□ 1.21
CNTNAP3-204ENST00000377656 PAK3O75914 559 aaPredicted RBP22.62■■□□□ 1.21
CNTNAP3-204ENST00000377656 RBM19Q9Y4C8 960 aaKnown RBP22.61■■□□□ 1.21
CNTNAP3-204ENST00000377656 FHOD3Q2V2M9 1422 aa22.61■■□□□ 1.21
CNTNAP3-204ENST00000377656 EIF3AQ14152 1382 aaKnown RBP22.61■■□□□ 1.21
CNTNAP3-204ENST00000377656 GOLGA6L4A6NEF3 574 aa22.61■■□□□ 1.21
CNTNAP3-204ENST00000377656 SPAG9O60271 1321 aaKnown RBP22.6■■□□□ 1.21
CNTNAP3-204ENST00000377656 JPH4Q96JJ6 628 aa22.57■■□□□ 1.2
CNTNAP3-204ENST00000377656 TERF2IPQ9NYB0 399 aa22.57■■□□□ 1.2
CNTNAP3-204ENST00000377656 TULP1O00294 542 aaPredicted RBP22.56■■□□□ 1.2
CNTNAP3-204ENST00000377656 APBB1O00213 710 aa22.56■■□□□ 1.2
CNTNAP3-204ENST00000377656 CCDC18Q5T9S5 1454 aa22.56■■□□□ 1.2
CNTNAP3-204ENST00000377656 RWDD1Q9H446 243 aaPredicted RBP22.55■■□□□ 1.2
CNTNAP3-204ENST00000377656 ATAD2BQ9ULI0 1458 aa22.55■■□□□ 1.2
CNTNAP3-204ENST00000377656 CHMP4AQ9BY43 222 aa22.55■■□□□ 1.2
CNTNAP3-204ENST00000377656 WASHC2CQ9Y4E1 1318 aa22.54■■□□□ 1.2
CNTNAP3-204ENST00000377656 CSB-PGBD3P0DP91 1061 aa22.53■■□□□ 1.2
CNTNAP3-204ENST00000377656 NRDCO43847 1150 aa22.53■■□□□ 1.2
CNTNAP3-204ENST00000377656 GOLGA6L6A8MZA4 724 aa22.53■■□□□ 1.2
CNTNAP3-204ENST00000377656 NLRP13Q86W25 1043 aa22.53■■□□□ 1.2
CNTNAP3-204ENST00000377656 ITPRIPQ8IWB1 547 aa22.53■■□□□ 1.2
CNTNAP3-204ENST00000377656 TSHZ2Q9NRE2 1034 aa22.51■■□□□ 1.19
CNTNAP3-204ENST00000377656 KIAA1211Q6ZU35 1233 aa22.5■■□□□ 1.19
CNTNAP3-204ENST00000377656 STK31Q9BXU1 1019 aa22.49■■□□□ 1.19
CNTNAP3-204ENST00000377656 SPRYD3Q8NCJ5 442 aa22.48■■□□□ 1.19
CNTNAP3-204ENST00000377656 EID1Q9Y6B2 187 aa22.48■■□□□ 1.19
CNTNAP3-204ENST00000377656 TCERG1O14776 1098 aaKnown RBP22.46■■□□□ 1.19
CNTNAP3-204ENST00000377656 NAP1L5Q96NT1 182 aaPredicted RBP22.46■■□□□ 1.19
CNTNAP3-204ENST00000377656 SMC4Q9NTJ3 1288 aa22.45■■□□□ 1.18
CNTNAP3-204ENST00000377656 NUTM2DQ5VT03 806 aaPredicted RBP22.44■■□□□ 1.18
CNTNAP3-204ENST00000377656 PDE3BQ13370 1112 aa22.44■■□□□ 1.18
CNTNAP3-204ENST00000377656 ZNF330Q9Y3S2 320 aaPredicted RBP22.44■■□□□ 1.18
CNTNAP3-204ENST00000377656 NGDNQ8NEJ9 315 aaKnown RBP22.43■■□□□ 1.18
CNTNAP3-204ENST00000377656 PMFBP1Q8TBY8 1022 aa22.43■■□□□ 1.18
CNTNAP3-204ENST00000377656 HDAC5Q9UQL6 1122 aa22.41■■□□□ 1.18
CNTNAP3-204ENST00000377656 TRAK1Q9UPV9 953 aa22.4■■□□□ 1.18
CNTNAP3-204ENST00000377656 L1TD1Q5T7N2 865 aaKnown RBP22.4■■□□□ 1.18
CNTNAP3-204ENST00000377656 RTN4Q9NQC3 1192 aaKnown RBP22.39■■□□□ 1.18
CNTNAP3-204ENST00000377656 CCDC146Q8IYE0 955 aa22.39■■□□□ 1.18
CNTNAP3-204ENST00000377656 ST20-MTHFSA0A0A6YYL1 179 aa22.39■■□□□ 1.17
CNTNAP3-204ENST00000377656 LMOD3Q0VAK6 560 aa22.39■■□□□ 1.17
CNTNAP3-204ENST00000377656 CLUAP1Q96AJ1 413 aa22.38■■□□□ 1.17
CNTNAP3-204ENST00000377656 HMMRO75330 724 aa22.38■■□□□ 1.17
CNTNAP3-204ENST00000377656 CCDC144AA2RUR9 1427 aa22.38■■□□□ 1.17
CNTNAP3-204ENST00000377656 PHLDB1Q86UU1 1377 aa22.37■■□□□ 1.17
CNTNAP3-204ENST00000377656 CENPJQ9HC77 1338 aaPredicted RBP22.37■■□□□ 1.17
CNTNAP3-204ENST00000377656 AMPHP49418 695 aa22.36■■□□□ 1.17
CNTNAP3-204ENST00000377656 GBP4Q96PP9 640 aa22.36■■□□□ 1.17
CNTNAP3-204ENST00000377656 GNL2Q13823 731 aaKnown RBP22.36■■□□□ 1.17
CNTNAP3-204ENST00000377656 ISY1Q9ULR0 285 aaKnown RBP22.35■■□□□ 1.17
CNTNAP3-204ENST00000377656 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.34■■□□□ 1.17
CNTNAP3-204ENST00000377656 KIF15Q9NS87 1388 aa22.34■■□□□ 1.17
CNTNAP3-204ENST00000377656 SLKQ9H2G2 1235 aaPredicted RBP22.32■■□□□ 1.16
CNTNAP3-204ENST00000377656 NUTM2FA1L443 756 aa22.32■■□□□ 1.16
CNTNAP3-204ENST00000377656 SLC4A10Q6U841 1118 aa22.32■■□□□ 1.16
CNTNAP3-204ENST00000377656 PTPRGP23470 1445 aa22.32■■□□□ 1.16
CNTNAP3-204ENST00000377656 CHAF1AQ13111 956 aaPredicted RBP22.32■■□□□ 1.16
CNTNAP3-204ENST00000377656 GORABQ5T7V8 394 aa22.32■■□□□ 1.16
CNTNAP3-204ENST00000377656 PANK3Q9H999 370 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms