RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, humanhuman

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-204ENST00000377499 PTPRKQ15262 1439 aa16.88■□□□□ 0.29
LMO7-204ENST00000377499 SHROOM2Q13796 1616 aa16.87■□□□□ 0.29
LMO7-204ENST00000377499 CYB5RLQ6IPT4 315 aa16.86■□□□□ 0.29
LMO7-204ENST00000377499 ANP32EQ9BTT0 268 aa16.86■□□□□ 0.29
LMO7-204ENST00000377499 KIF14Q15058 1648 aa16.86■□□□□ 0.29
LMO7-204ENST00000377499 SIN3AQ96ST3 1273 aa16.84■□□□□ 0.29
LMO7-204ENST00000377499 GPATCH8Q9UKJ3 1502 aaKnown RBP16.84■□□□□ 0.29
LMO7-204ENST00000377499 ABCC2Q92887 1545 aa16.84■□□□□ 0.29
LMO7-204ENST00000377499 YTHDC1Q96MU7 727 aaKnown RBP16.82■□□□□ 0.28
LMO7-204ENST00000377499 CLSPNQ9HAW4 1339 aa16.81■□□□□ 0.28
LMO7-204ENST00000377499 DAPK1P53355 1430 aa16.8■□□□□ 0.28
LMO7-204ENST00000377499 CAMSAP2Q08AD1 1489 aa16.79■□□□□ 0.28
LMO7-204ENST00000377499 HFM1A2PYH4 1435 aa16.79■□□□□ 0.28
LMO7-204ENST00000377499 NAIPQ13075 1403 aa16.79■□□□□ 0.28
LMO7-204ENST00000377499 EFCAB2Q5VUJ9 269 aa16.78■□□□□ 0.28
LMO7-204ENST00000377499 TCOF1Q13428 1488 aaKnown RBP16.78■□□□□ 0.28
LMO7-204ENST00000377499 ABCC5O15440 1437 aa16.78■□□□□ 0.28
LMO7-204ENST00000377499 ARHGAP5Q13017 1502 aa16.76■□□□□ 0.27
LMO7-204ENST00000377499 SLC4A1APQ9BWU0 796 aaKnown RBP16.76■□□□□ 0.27
LMO7-204ENST00000377499 FOXD1Q16676 465 aa16.75■□□□□ 0.27
LMO7-204ENST00000377499 ANKRD30AQ9BXX3 1397 aa16.74■□□□□ 0.27
LMO7-204ENST00000377499 ITSN2Q9NZM3 1697 aa16.73■□□□□ 0.27
LMO7-204ENST00000377499 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.73■□□□□ 0.271e-7■■□□□ 12.7
LMO7-204ENST00000377499 ABCC10Q5T3U5 1492 aa16.72■□□□□ 0.27
LMO7-204ENST00000377499 MPHOSPH9Q99550 1183 aa16.71■□□□□ 0.27
LMO7-204ENST00000377499 ZNF316A6NFI3 1004 aaPredicted RBP16.71■□□□□ 0.27
LMO7-204ENST00000377499 ZCCHC11Q5TAX3 1644 aaKnown RBP16.7■□□□□ 0.26
LMO7-204ENST00000377499 UHRF1BP1LA0JNW5 1464 aa16.7■□□□□ 0.26
LMO7-204ENST00000377499 KDM5BQ9UGL1 1544 aa16.69■□□□□ 0.26
LMO7-204ENST00000377499 TONSLQ96HA7 1378 aa16.69■□□□□ 0.26
LMO7-204ENST00000377499 RSPH4AQ5TD94 716 aa16.68■□□□□ 0.26
LMO7-204ENST00000377499 ADCY10Q96PN6 1610 aa16.67■□□□□ 0.26
LMO7-204ENST00000377499 C9orf84Q5VXU9 1444 aa16.67■□□□□ 0.26
LMO7-204ENST00000377499 ANO8Q9HCE9 1232 aaPredicted RBP16.67■□□□□ 0.26
LMO7-204ENST00000377499 ASXL2Q76L83 1435 aa16.67■□□□□ 0.26
LMO7-204ENST00000377499 AKNAQ7Z591 1439 aa16.67■□□□□ 0.26
LMO7-204ENST00000377499 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.66■□□□□ 0.26
LMO7-204ENST00000377499 ROCK1Q13464 1354 aa16.66■□□□□ 0.26
LMO7-204ENST00000377499 AFAP1Q8N556 730 aa16.65■□□□□ 0.26
LMO7-204ENST00000377499 CDC42BPAQ5VT25 1732 aa16.65■□□□□ 0.26
LMO7-204ENST00000377499 DNMT1P26358 1616 aaKnown RBP16.65■□□□□ 0.26
LMO7-204ENST00000377499 WDR7Q9Y4E6 1490 aa16.65■□□□□ 0.26
LMO7-204ENST00000377499 DIEXFQ68CQ4 756 aaKnown RBP16.65■□□□□ 0.26
LMO7-204ENST00000377499 TTC37Q6PGP7 1564 aa16.65■□□□□ 0.26
LMO7-204ENST00000377499 NCOA1Q15788 1441 aa16.64■□□□□ 0.25
LMO7-204ENST00000377499 KIF15Q9NS87 1388 aa16.64■□□□□ 0.25
LMO7-204ENST00000377499 ANKRD50Q9ULJ7 1429 aa16.62■□□□□ 0.25
LMO7-204ENST00000377499 NUP155O75694 1391 aa16.62■□□□□ 0.25
LMO7-204ENST00000377499 MAPKBP1O60336 1514 aa16.62■□□□□ 0.25
LMO7-204ENST00000377499 SPAG9O60271 1321 aaKnown RBP16.62■□□□□ 0.25
LMO7-204ENST00000377499 PLCH2O75038 1416 aa16.62■□□□□ 0.25
LMO7-204ENST00000377499 PKD2Q13563 968 aa16.61■□□□□ 0.25
LMO7-204ENST00000377499 CCDC141Q6ZP82 1450 aa16.61■□□□□ 0.25
LMO7-204ENST00000377499 SLC24A1O60721 1099 aa16.61■□□□□ 0.25
LMO7-204ENST00000377499 SYCP2Q9BX26 1530 aa16.6■□□□□ 0.25
LMO7-204ENST00000377499 KDM6BO15054 1643 aa16.58■□□□□ 0.25
LMO7-204ENST00000377499 ZNF326Q5BKZ1 582 aaKnown RBP16.57■□□□□ 0.24
LMO7-204ENST00000377499 PLEKHH2Q8IVE3 1493 aa16.57■□□□□ 0.24
LMO7-204ENST00000377499 SAMD9LQ8IVG5 1584 aa16.56■□□□□ 0.24
LMO7-204ENST00000377499 PREX2Q70Z35 1606 aa16.56■□□□□ 0.24
LMO7-204ENST00000377499 HIRIP3Q9BW71 556 aaPredicted RBP16.56■□□□□ 0.24
LMO7-204ENST00000377499 MYO5CQ9NQX4 1742 aa16.56■□□□□ 0.24
LMO7-204ENST00000377499 CDC42BPBQ9Y5S2 1711 aa16.55■□□□□ 0.24
LMO7-204ENST00000377499 FAM69CQ0P6D2 419 aa16.55■□□□□ 0.24
LMO7-204ENST00000377499 FANCAO15360 1455 aa16.55■□□□□ 0.24
LMO7-204ENST00000377499 MBD5Q9P267 1494 aa16.55■□□□□ 0.24
LMO7-204ENST00000377499 CD109Q6YHK3 1445 aa16.54■□□□□ 0.24
LMO7-204ENST00000377499 SCAPERQ9BY12 1400 aa16.54■□□□□ 0.24
LMO7-204ENST00000377499 GCC2Q8IWJ2 1684 aa16.53■□□□□ 0.24
LMO7-204ENST00000377499 TRAPPC8Q9Y2L5 1435 aa16.52■□□□□ 0.24
LMO7-204ENST00000377499 PPP1R15AO75807 674 aaPredicted RBP16.52■□□□□ 0.24
LMO7-204ENST00000377499 TIMELESSQ9UNS1 1208 aa16.52■□□□□ 0.24
LMO7-204ENST00000377499 KIAA1107Q9UPP5 1409 aa16.5■□□□□ 0.23
LMO7-204ENST00000377499 ADGRL1O94910 1474 aa16.5■□□□□ 0.23
LMO7-204ENST00000377499 CCDC136Q96JN2 1154 aa16.49■□□□□ 0.23
LMO7-204ENST00000377499 ADGRL2O95490 1459 aa16.49■□□□□ 0.23
LMO7-204ENST00000377499 SHANK2Q9UPX8 1470 aa16.49■□□□□ 0.23
LMO7-204ENST00000377499 KIF3BO15066 747 aa16.49■□□□□ 0.23
LMO7-204ENST00000377499 L3MBTL2Q969R5 705 aa16.48■□□□□ 0.23
LMO7-204ENST00000377499 ARHGEF12Q9NZN5 1544 aa16.48■□□□□ 0.23
LMO7-204ENST00000377499 RAPGEF3O95398 923 aa16.47■□□□□ 0.23
LMO7-204ENST00000377499 ADGBQ8N7X0 1667 aa16.47■□□□□ 0.23
LMO7-204ENST00000377499 KDM2AQ9Y2K7 1162 aa16.47■□□□□ 0.23
LMO7-204ENST00000377499 ARHGEF5Q12774 1597 aa16.47■□□□□ 0.23
LMO7-204ENST00000377499 RGL3Q3MIN7 710 aa16.46■□□□□ 0.22
LMO7-204ENST00000377499 RIMBP3CA6NJZ7 1639 aa16.45■□□□□ 0.22
LMO7-204ENST00000377499 RIMBP3BA6NNM3 1639 aa16.45■□□□□ 0.22
LMO7-204ENST00000377499 RIMBP3Q9UFD9 1639 aa16.45■□□□□ 0.22
LMO7-204ENST00000377499 CROCC2H7BZ55 1655 aa16.44■□□□□ 0.22
LMO7-204ENST00000377499 GGT6Q6P531 493 aa16.43■□□□□ 0.22
LMO7-204ENST00000377499 ANKRD30BQ9BXX2 1392 aa16.42■□□□□ 0.22
LMO7-204ENST00000377499 EIF5BO60841 1220 aaKnown RBP16.42■□□□□ 0.22
LMO7-204ENST00000377499 ABCC1P33527 1531 aa16.41■□□□□ 0.22
LMO7-204ENST00000377499 PZPP20742 1482 aa16.4■□□□□ 0.22
LMO7-204ENST00000377499 ABCA9Q8IUA7 1624 aa16.39■□□□□ 0.21
LMO7-204ENST00000377499 DENND4BO75064 1496 aaPredicted RBP16.37■□□□□ 0.21
LMO7-204ENST00000377499 KANK1Q14678 1352 aa16.37■□□□□ 0.21
LMO7-204ENST00000377499 DCAF11Q8TEB1 546 aa16.37■□□□□ 0.21
LMO7-204ENST00000377499 POLR3GLQ9BT43 218 aa16.37■□□□□ 0.21
LMO7-204ENST00000377499 DDX10Q13206 875 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms