RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 DISP1Q96F81 1524 aa21.45■■□□□ 1.02
FXN-201ENST00000377270 UACAQ9BZF9 1416 aa21.44■■□□□ 1.02
FXN-201ENST00000377270 CHIC2Q9UKJ5 165 aa21.44■■□□□ 1.02
FXN-201ENST00000377270 CHMP7Q8WUX9 453 aaPredicted RBP21.43■■□□□ 1.02
FXN-201ENST00000377270 KCNH8Q96L42 1107 aa21.43■■□□□ 1.02
FXN-201ENST00000377270 KIAA0556O60303 1618 aa21.43■■□□□ 1.02
FXN-201ENST00000377270 RRP7BPQ9NSQ0 103 aa21.42■■□□□ 1.02
FXN-201ENST00000377270 TCOF1Q13428 1488 aaKnown RBP21.42■■□□□ 1.02
FXN-201ENST00000377270 PPP1R15AO75807 674 aaPredicted RBP21.42■■□□□ 1.02
FXN-201ENST00000377270 FBLN2P98095 1184 aa21.41■■□□□ 1.02
FXN-201ENST00000377270 MAGI1Q96QZ7 1491 aaPredicted RBP21.39■■□□□ 1.01
FXN-201ENST00000377270 MIA2Q96PC5 1412 aa21.38■■□□□ 1.01
FXN-201ENST00000377270 TONSLQ96HA7 1378 aa21.36■■□□□ 1.01
FXN-201ENST00000377270 GLIPR1L2Q4G1C9 344 aa21.36■■□□□ 1.01
FXN-201ENST00000377270 SYNJ2O15056 1496 aa21.35■■□□□ 1.01
FXN-201ENST00000377270 NUP153P49790 1475 aaKnown RBP21.35■■□□□ 1.01
FXN-201ENST00000377270 VSIG10Q8N0Z9 540 aa21.33■■□□□ 1.01
FXN-201ENST00000377270 CDK11AQ9UQ88 783 aaPredicted RBP21.33■■□□□ 1
FXN-201ENST00000377270 RAPGEF6Q8TEU7 1601 aa21.33■■□□□ 1
FXN-201ENST00000377270 CEP170Q5SW79 1584 aa21.32■■□□□ 1
FXN-201ENST00000377270 TRIM52Q96A61 297 aa21.31■■□□□ 1
FXN-201ENST00000377270 A0A0U1RQG5 324 aaPredicted RBP21.3■■□□□ 1
FXN-201ENST00000377270 PDE4CQ08493 712 aa21.3■■□□□ 1
FXN-201ENST00000377270 HIRIP3Q9BW71 556 aaPredicted RBP21.29■■□□□ 1
FXN-201ENST00000377270 DDX10Q13206 875 aaKnown RBP21.29■■□□□ 1
FXN-201ENST00000377270 JPH4Q96JJ6 628 aa21.28■■□□□ 1
FXN-201ENST00000377270 AKNAQ7Z591 1439 aa21.27■■□□□ 1
FXN-201ENST00000377270 GCC2Q8IWJ2 1684 aa21.27■□□□□ 0.99
FXN-201ENST00000377270 ZNF644Q9H582 1327 aaPredicted RBP21.26■□□□□ 0.99
FXN-201ENST00000377270 RTL5Q5HYW3 569 aaPredicted RBP21.25■□□□□ 0.99
FXN-201ENST00000377270 PLB1Q6P1J6 1458 aa21.24■□□□□ 0.99
FXN-201ENST00000377270 KDM6BO15054 1643 aa21.24■□□□□ 0.99
FXN-201ENST00000377270 CARMIL2Q6F5E8 1435 aa21.24■□□□□ 0.99
FXN-201ENST00000377270 NOP58Q9Y2X3 529 aaKnown RBP21.24■□□□□ 0.99
FXN-201ENST00000377270 NUP160Q12769 1436 aa21.23■□□□□ 0.99
FXN-201ENST00000377270 PRG4Q92954 1404 aaPredicted RBP21.23■□□□□ 0.99
FXN-201ENST00000377270 DAPK1P53355 1430 aa21.22■□□□□ 0.99
FXN-201ENST00000377270 FGD1P98174 961 aa21.22■□□□□ 0.99
FXN-201ENST00000377270 MPHOSPH9Q99550 1183 aa21.21■□□□□ 0.99
FXN-201ENST00000377270 TROQ12816 1431 aaPredicted RBP21.2■□□□□ 0.98
FXN-201ENST00000377270 ABCC5O15440 1437 aa21.19■□□□□ 0.98
FXN-201ENST00000377270 DENND4BO75064 1496 aaPredicted RBP21.19■□□□□ 0.98
FXN-201ENST00000377270 PDIA4P13667 645 aaKnown RBP21.18■□□□□ 0.98
FXN-201ENST00000377270 ROCK1Q13464 1354 aa21.18■□□□□ 0.98
FXN-201ENST00000377270 CFDP1Q9UEE9 299 aaPredicted RBP21.17■□□□□ 0.98
FXN-201ENST00000377270 PAK3O75914 559 aaPredicted RBP21.16■□□□□ 0.98
FXN-201ENST00000377270 DNMT1P26358 1616 aaKnown RBP21.16■□□□□ 0.98
FXN-201ENST00000377270 FOXD1Q16676 465 aa21.14■□□□□ 0.98
FXN-201ENST00000377270 KDM5BQ9UGL1 1544 aa21.13■□□□□ 0.97
FXN-201ENST00000377270 AAMPQ13685 434 aa21.13■□□□□ 0.97
FXN-201ENST00000377270 RSPH6AQ9H0K4 717 aa21.13■□□□□ 0.97
FXN-201ENST00000377270 ZNF777Q9ULD5 760 aaPredicted RBP21.13■□□□□ 0.97
FXN-201ENST00000377270 RBM10P98175 930 aaKnown RBP21.12■□□□□ 0.97
FXN-201ENST00000377270 AEBP2Q6ZN18 517 aaPredicted RBP21.12■□□□□ 0.97
FXN-201ENST00000377270 GPATCH8Q9UKJ3 1502 aaKnown RBP21.11■□□□□ 0.97
FXN-201ENST00000377270 CAMSAP2Q08AD1 1489 aa21.1■□□□□ 0.97
FXN-201ENST00000377270 C11orf95C9JLR9 678 aaPredicted RBP21.09■□□□□ 0.97
FXN-201ENST00000377270 KIF14Q15058 1648 aa21.09■□□□□ 0.97
FXN-201ENST00000377270 PLEKHD1A6NEE1 506 aa21.09■□□□□ 0.97
FXN-201ENST00000377270 CCER2I3L3R5 266 aa21.08■□□□□ 0.97
FXN-201ENST00000377270 BCL11BQ9C0K0 894 aaPredicted RBP21.07■□□□□ 0.96
FXN-201ENST00000377270 ITSN2Q9NZM3 1697 aa21.06■□□□□ 0.96
FXN-201ENST00000377270 SLC4A1APQ9BWU0 796 aaKnown RBP21.06■□□□□ 0.96
FXN-201ENST00000377270 ADCY10Q96PN6 1610 aa21.05■□□□□ 0.96
FXN-201ENST00000377270 ANP32CO43423 234 aa21.05■□□□□ 0.96
FXN-201ENST00000377270 L3MBTL2Q969R5 705 aa21.05■□□□□ 0.96
FXN-201ENST00000377270 ABCA8O94911 1581 aa21.05■□□□□ 0.96
FXN-201ENST00000377270 ATP10BO94823 1461 aa21.04■□□□□ 0.96
FXN-201ENST00000377270 ANKRD30BQ9BXX2 1392 aa21.03■□□□□ 0.96
FXN-201ENST00000377270 BRPF3Q9ULD4 1205 aa21.02■□□□□ 0.96
FXN-201ENST00000377270 NCOA1Q15788 1441 aa21.02■□□□□ 0.96
FXN-201ENST00000377270 HSPA5P11021 654 aaKnown RBP21■□□□□ 0.95
FXN-201ENST00000377270 PTPRGP23470 1445 aa20.99■□□□□ 0.95
FXN-201ENST00000377270 RPRD2Q5VT52 1461 aaKnown RBP20.97■□□□□ 0.95
FXN-201ENST00000377270 EIF4G2P78344 907 aaKnown RBP eCLIP20.97■□□□□ 0.95
FXN-201ENST00000377270 ANKRD30AQ9BXX3 1397 aa20.96■□□□□ 0.95
FXN-201ENST00000377270 WASHC2AQ641Q2 1341 aa20.96■□□□□ 0.95
FXN-201ENST00000377270 ADGBQ8N7X0 1667 aa20.95■□□□□ 0.94
FXN-201ENST00000377270 ABCC10Q5T3U5 1492 aa20.95■□□□□ 0.94
FXN-201ENST00000377270 ADGRL2O95490 1459 aa20.95■□□□□ 0.94
FXN-201ENST00000377270 WASHC2CQ9Y4E1 1318 aa20.93■□□□□ 0.94
FXN-201ENST00000377270 PZPP20742 1482 aa20.93■□□□□ 0.94
FXN-201ENST00000377270 CDC42BPAQ5VT25 1732 aa20.93■□□□□ 0.94
FXN-201ENST00000377270 CROCC2H7BZ55 1655 aa20.92■□□□□ 0.94
FXN-201ENST00000377270 NBPF8Q3BBV2 869 aa20.91■□□□□ 0.94
FXN-201ENST00000377270 KLHL34Q8N239 644 aa20.9■□□□□ 0.94
FXN-201ENST00000377270 TSPY4P0CV99 314 aa20.89■□□□□ 0.93
FXN-201ENST00000377270 TSPY10P0CW01 314 aa20.89■□□□□ 0.93
FXN-201ENST00000377270 ANKRD50Q9ULJ7 1429 aa20.89■□□□□ 0.93
FXN-201ENST00000377270 TEX14Q8IWB6 1497 aa20.89■□□□□ 0.93
FXN-201ENST00000377270 CHD1O14646 1710 aa20.89■□□□□ 0.93
FXN-201ENST00000377270 HNRNPMP52272 730 aaKnown RBP eCLIP20.88■□□□□ 0.93
FXN-201ENST00000377270 PKD2Q13563 968 aa20.88■□□□□ 0.93
FXN-201ENST00000377270 C9orf84Q5VXU9 1444 aa20.87■□□□□ 0.93
FXN-201ENST00000377270 IRX6P78412 446 aaPredicted RBP20.86■□□□□ 0.93
FXN-201ENST00000377270 KIAA1107Q9UPP5 1409 aa20.86■□□□□ 0.93
FXN-201ENST00000377270 SHANK2Q9UPX8 1470 aa20.84■□□□□ 0.93
FXN-201ENST00000377270 PPP4R2Q9NY27 417 aa20.83■□□□□ 0.93
FXN-201ENST00000377270 NUP155O75694 1391 aa20.82■□□□□ 0.92
FXN-201ENST00000377270 NEFMP07197 916 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms