RNA–Protein interactions for RNA: ENST00000376909.6

SSX9-201, Transcript of Protein SSX9, humanhuman

BASIC

Gene SSX9, Length 591 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-201ENST00000376909 LRRIQ1Q96JM4 1722 aa11.89□□□□□ -0.51
SSX9-201ENST00000376909 EHBP1L1Q8N3D4 1523 aa11.89□□□□□ -0.51
SSX9-201ENST00000376909 PLEKHD1A6NEE1 506 aa11.88□□□□□ -0.51
SSX9-201ENST00000376909 ARHGEF11O15085 1522 aa11.87□□□□□ -0.51
SSX9-201ENST00000376909 MAGI3Q5TCQ9 1506 aa11.86□□□□□ -0.51
SSX9-201ENST00000376909 TROQ12816 1431 aaPredicted RBP11.86□□□□□ -0.51
SSX9-201ENST00000376909 NCOA2Q15596 1464 aa11.84□□□□□ -0.51
SSX9-201ENST00000376909 PHLDB1Q86UU1 1377 aa11.84□□□□□ -0.51
SSX9-201ENST00000376909 KDM5BQ9UGL1 1544 aa11.83□□□□□ -0.52
SSX9-201ENST00000376909 RRBP1Q9P2E9 1410 aaKnown RBP11.82□□□□□ -0.52
SSX9-201ENST00000376909 SUPT6HQ7KZ85 1726 aaKnown RBP11.82□□□□□ -0.52
SSX9-201ENST00000376909 CCNB3Q8WWL7 1395 aa11.81□□□□□ -0.52
SSX9-201ENST00000376909 NPM1P06748 294 aaKnown RBP eCLIP11.81□□□□□ -0.52
SSX9-201ENST00000376909 ADCY10Q96PN6 1610 aa11.81□□□□□ -0.52
SSX9-201ENST00000376909 RIMBP3CA6NJZ7 1639 aa11.8□□□□□ -0.52
SSX9-201ENST00000376909 RIMBP3BA6NNM3 1639 aa11.8□□□□□ -0.52
SSX9-201ENST00000376909 RIMBP3Q9UFD9 1639 aa11.8□□□□□ -0.52
SSX9-201ENST00000376909 CYB5RLQ6IPT4 315 aa11.8□□□□□ -0.52
SSX9-201ENST00000376909 MYOM3Q5VTT5 1437 aa11.79□□□□□ -0.52
SSX9-201ENST00000376909 ZCCHC11Q5TAX3 1644 aaKnown RBP11.78□□□□□ -0.52
SSX9-201ENST00000376909 FGD6Q6ZV73 1430 aa11.77□□□□□ -0.52
SSX9-201ENST00000376909 FAM50AQ14320 339 aaKnown RBP11.76□□□□□ -0.53
SSX9-201ENST00000376909 KCNH8Q96L42 1107 aa11.76□□□□□ -0.53
SSX9-201ENST00000376909 KIF14Q15058 1648 aa11.75□□□□□ -0.53
SSX9-201ENST00000376909 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.75□□□□□ -0.53
SSX9-201ENST00000376909 MIA2Q96PC5 1412 aa11.75□□□□□ -0.53
SSX9-201ENST00000376909 ABCC10Q5T3U5 1492 aa11.74□□□□□ -0.53
SSX9-201ENST00000376909 ASXL2Q76L83 1435 aa11.73□□□□□ -0.53
SSX9-201ENST00000376909 CFDP1Q9UEE9 299 aaPredicted RBP11.73□□□□□ -0.53
SSX9-201ENST00000376909 GPATCH8Q9UKJ3 1502 aaKnown RBP11.73□□□□□ -0.53
SSX9-201ENST00000376909 WDR7Q9Y4E6 1490 aa11.73□□□□□ -0.53
SSX9-201ENST00000376909 ITGAEP38570 1179 aa11.71□□□□□ -0.53
SSX9-201ENST00000376909 TCOF1Q13428 1488 aaKnown RBP11.7□□□□□ -0.54
SSX9-201ENST00000376909 PTPN23Q9H3S7 1636 aa11.7□□□□□ -0.54
SSX9-201ENST00000376909 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.69□□□□□ -0.54
SSX9-201ENST00000376909 ZNF777Q9ULD5 760 aaPredicted RBP11.68□□□□□ -0.54
SSX9-201ENST00000376909 ITSN2Q9NZM3 1697 aa11.68□□□□□ -0.54
SSX9-201ENST00000376909 ZNF644Q9H582 1327 aaPredicted RBP11.67□□□□□ -0.54
SSX9-201ENST00000376909 SPDYE2BA6NHP3 402 aa11.66□□□□□ -0.54
SSX9-201ENST00000376909 SPDYE6P0CI01 402 aa11.66□□□□□ -0.54
SSX9-201ENST00000376909 MKRN4PQ13434 485 aaPredicted RBP11.66□□□□□ -0.54
SSX9-201ENST00000376909 SPDYE2Q495Y8 402 aa11.66□□□□□ -0.54
SSX9-201ENST00000376909 AKT1S1Q96B36 256 aa11.66□□□□□ -0.54
SSX9-201ENST00000376909 PLCH2O75038 1416 aa11.66□□□□□ -0.54
SSX9-201ENST00000376909 TTC37Q6PGP7 1564 aa11.66□□□□□ -0.54
SSX9-201ENST00000376909 MAPKBP1O60336 1514 aa11.65□□□□□ -0.54
SSX9-201ENST00000376909 EFCAB2Q5VUJ9 269 aa11.65□□□□□ -0.54
SSX9-201ENST00000376909 CAMSAP2Q08AD1 1489 aa11.64□□□□□ -0.55
SSX9-201ENST00000376909 CDC42BPAQ5VT25 1732 aa11.63□□□□□ -0.55
SSX9-201ENST00000376909 ARHGAP5Q13017 1502 aa11.63□□□□□ -0.55
SSX9-201ENST00000376909 PREX2Q70Z35 1606 aa11.63□□□□□ -0.55
SSX9-201ENST00000376909 PTPRKQ15262 1439 aa11.62□□□□□ -0.55
SSX9-201ENST00000376909 DNAJC5Q9H3Z4 198 aa11.62□□□□□ -0.55
SSX9-201ENST00000376909 ABCC5O15440 1437 aa11.61□□□□□ -0.55
SSX9-201ENST00000376909 DAPK1P53355 1430 aa11.61□□□□□ -0.55
SSX9-201ENST00000376909 ABCA9Q8IUA7 1624 aa11.61□□□□□ -0.55
SSX9-201ENST00000376909 ARAP3Q8WWN8 1544 aa11.6□□□□□ -0.55
SSX9-201ENST00000376909 MYO5CQ9NQX4 1742 aa11.6□□□□□ -0.55
SSX9-201ENST00000376909 PLEKHH2Q8IVE3 1493 aa11.6□□□□□ -0.55
SSX9-201ENST00000376909 HNRNPMP52272 730 aaKnown RBP eCLIP11.6□□□□□ -0.55
SSX9-201ENST00000376909 RSPH4AQ5TD94 716 aa11.6□□□□□ -0.55
SSX9-201ENST00000376909 CHIC2Q9UKJ5 165 aa11.6□□□□□ -0.55
SSX9-201ENST00000376909 CD109Q6YHK3 1445 aa11.6□□□□□ -0.55
SSX9-201ENST00000376909 CDC42BPBQ9Y5S2 1711 aa11.59□□□□□ -0.55
SSX9-201ENST00000376909 SETD5Q9C0A6 1442 aa11.59□□□□□ -0.55
SSX9-201ENST00000376909 KIAA1107Q9UPP5 1409 aa11.59□□□□□ -0.55
SSX9-201ENST00000376909 SAMD9LQ8IVG5 1584 aa11.58□□□□□ -0.55
SSX9-201ENST00000376909 DNMT1P26358 1616 aaKnown RBP11.58□□□□□ -0.56
SSX9-201ENST00000376909 MBD5Q9P267 1494 aa11.57□□□□□ -0.56
SSX9-201ENST00000376909 TSPY4P0CV99 314 aa11.57□□□□□ -0.56
SSX9-201ENST00000376909 TSPY10P0CW01 314 aa11.57□□□□□ -0.56
SSX9-201ENST00000376909 FAM69CQ0P6D2 419 aa11.57□□□□□ -0.56
SSX9-201ENST00000376909 AKNAQ7Z591 1439 aa11.57□□□□□ -0.56
SSX9-201ENST00000376909 FANCAO15360 1455 aa11.57□□□□□ -0.56
SSX9-201ENST00000376909 ROCK1Q13464 1354 aa11.56□□□□□ -0.56
SSX9-201ENST00000376909 HFM1A2PYH4 1435 aa11.56□□□□□ -0.56
SSX9-201ENST00000376909 GLI2P10070 1586 aa11.56□□□□□ -0.56
SSX9-201ENST00000376909 ARHGEF5Q12774 1597 aa11.56□□□□□ -0.56
SSX9-201ENST00000376909 RRP7BPQ9NSQ0 103 aa11.56□□□□□ -0.56
SSX9-201ENST00000376909 RAB3GAP2Q9H2M9 1393 aa11.55□□□□□ -0.56
SSX9-201ENST00000376909 HRCP23327 699 aa11.55□□□□□ -0.56
SSX9-201ENST00000376909 CCDC141Q6ZP82 1450 aa11.55□□□□□ -0.56
SSX9-201ENST00000376909 SYCP2Q9BX26 1530 aa11.55□□□□□ -0.56
SSX9-201ENST00000376909 NAIPQ13075 1403 aa11.54□□□□□ -0.56
SSX9-201ENST00000376909 CCER1Q8TC90 406 aaPredicted RBP11.54□□□□□ -0.56
SSX9-201ENST00000376909 SHANK2Q9UPX8 1470 aa11.54□□□□□ -0.56
SSX9-201ENST00000376909 ANKRD30AQ9BXX3 1397 aa11.54□□□□□ -0.56
SSX9-201ENST00000376909 C9orf84Q5VXU9 1444 aa11.53□□□□□ -0.56
SSX9-201ENST00000376909 ABCC1P33527 1531 aa11.53□□□□□ -0.56
SSX9-201ENST00000376909 ARHGEF12Q9NZN5 1544 aa11.53□□□□□ -0.56
SSX9-201ENST00000376909 DIP2BQ9P265 1576 aa11.53□□□□□ -0.56
SSX9-201ENST00000376909 ADGRL2O95490 1459 aa11.52□□□□□ -0.56
SSX9-201ENST00000376909 ZNF692Q9BU19 519 aaPredicted RBP11.52□□□□□ -0.57
SSX9-201ENST00000376909 NCOA1Q15788 1441 aa11.52□□□□□ -0.57
SSX9-201ENST00000376909 SCAPERQ9BY12 1400 aa11.52□□□□□ -0.57
SSX9-201ENST00000376909 TRAPPC8Q9Y2L5 1435 aa11.52□□□□□ -0.57
SSX9-201ENST00000376909 ADGRL1O94910 1474 aa11.51□□□□□ -0.57
SSX9-201ENST00000376909 NEO1Q92859 1461 aa11.51□□□□□ -0.57
SSX9-201ENST00000376909 CFAP74Q9C0B2 1584 aa11.5□□□□□ -0.57
SSX9-201ENST00000376909 MAP3K4Q9Y6R4 1608 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms