RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-225ENST00000376568 UACAQ9BZF9 1416 aa18.8■□□□□ 0.6
DDR1-225ENST00000376568 EIF4G3O43432 1585 aaKnown RBP18.79■□□□□ 0.6
DDR1-225ENST00000376568 L3MBTL2Q969R5 705 aa18.77■□□□□ 0.6
DDR1-225ENST00000376568 SCAPERQ9BY12 1400 aa18.76■□□□□ 0.59
DDR1-225ENST00000376568 FGD6Q6ZV73 1430 aa18.76■□□□□ 0.59
DDR1-225ENST00000376568 ARHGEF11O15085 1522 aa18.76■□□□□ 0.59
DDR1-225ENST00000376568 SOX12O15370 315 aa18.76■□□□□ 0.59
DDR1-225ENST00000376568 TNNT2P45379 298 aaPredicted RBP18.75■□□□□ 0.59
DDR1-225ENST00000376568 LMOD2Q6P5Q4 547 aa18.75■□□□□ 0.59
DDR1-225ENST00000376568 EIF4G2P78344 907 aaKnown RBP eCLIP18.75■□□□□ 0.598e-8■■■■■ 39.6
DDR1-225ENST00000376568 FAM9BQ8IZU0 186 aa18.75■□□□□ 0.59
DDR1-225ENST00000376568 WDR62O43379 1518 aa18.74■□□□□ 0.59
DDR1-225ENST00000376568 MYOM3Q5VTT5 1437 aa18.72■□□□□ 0.59
DDR1-225ENST00000376568 BCL11AQ9H165 835 aa18.72■□□□□ 0.59
DDR1-225ENST00000376568 EPRSP07814 1512 aaKnown RBP18.72■□□□□ 0.59
DDR1-225ENST00000376568 MIER1Q8N108 512 aa18.71■□□□□ 0.59
DDR1-225ENST00000376568 KANK1Q14678 1352 aa18.7■□□□□ 0.58
DDR1-225ENST00000376568 ARHGAP5Q13017 1502 aa18.7■□□□□ 0.58
DDR1-225ENST00000376568 KIF15Q9NS87 1388 aa18.7■□□□□ 0.58
DDR1-225ENST00000376568 POGKQ9P215 609 aa18.7■□□□□ 0.58
DDR1-225ENST00000376568 PPM1GO15355 546 aaPredicted RBP18.67■□□□□ 0.58
DDR1-225ENST00000376568 PCF11O94913 1555 aaKnown RBP18.67■□□□□ 0.58
DDR1-225ENST00000376568 TROQ12816 1431 aaPredicted RBP18.67■□□□□ 0.58
DDR1-225ENST00000376568 CEBPAP49715 358 aaPredicted RBP18.66■□□□□ 0.58
DDR1-225ENST00000376568 FYCO1Q9BQS8 1478 aa18.64■□□□□ 0.57
DDR1-225ENST00000376568 RSPH4AQ5TD94 716 aa18.63■□□□□ 0.57
DDR1-225ENST00000376568 TRAK1Q9UPV9 953 aa18.63■□□□□ 0.57
DDR1-225ENST00000376568 CUL7Q14999 1698 aa18.62■□□□□ 0.57
DDR1-225ENST00000376568 DHX57Q6P158 1386 aaKnown RBP18.61■□□□□ 0.57
DDR1-225ENST00000376568 CD109Q6YHK3 1445 aa18.6■□□□□ 0.57
DDR1-225ENST00000376568 A0A0G2JS52 829 aa18.59■□□□□ 0.57
DDR1-225ENST00000376568 ATP10BO94823 1461 aa18.59■□□□□ 0.57
DDR1-225ENST00000376568 HSPA5P11021 654 aaKnown RBP18.58■□□□□ 0.57
DDR1-225ENST00000376568 CC2D1BQ5T0F9 858 aaKnown RBP18.58■□□□□ 0.56
DDR1-225ENST00000376568 ADAMTS12P58397 1594 aa18.58■□□□□ 0.56
DDR1-225ENST00000376568 TARBP1Q13395 1621 aaKnown RBP18.57■□□□□ 0.56
DDR1-225ENST00000376568 EFCAB5A4FU69 1503 aa18.57■□□□□ 0.56
DDR1-225ENST00000376568 TMEM132EQ6IEE7 984 aa18.57■□□□□ 0.56
DDR1-225ENST00000376568 THOC2Q8NI27 1593 aaKnown RBP18.57■□□□□ 0.56
DDR1-225ENST00000376568 NEFLP07196 543 aa18.56■□□□□ 0.56
DDR1-225ENST00000376568 SRPK2P78362 688 aaKnown RBP18.56■□□□□ 0.56
DDR1-225ENST00000376568 ANKRD50Q9ULJ7 1429 aa18.56■□□□□ 0.56
DDR1-225ENST00000376568 TIAM1Q13009 1591 aa18.54■□□□□ 0.56
DDR1-225ENST00000376568 FBXO31Q5XUX0 539 aaPredicted RBP18.53■□□□□ 0.56
DDR1-225ENST00000376568 RBM33Q96EV2 1170 aaKnown RBP18.52■□□□□ 0.56
DDR1-225ENST00000376568 NUP153P49790 1475 aaKnown RBP18.52■□□□□ 0.56
DDR1-225ENST00000376568 ASXL2Q76L83 1435 aa18.51■□□□□ 0.55
DDR1-225ENST00000376568 MRS2Q9HD23 443 aa18.51■□□□□ 0.55
DDR1-225ENST00000376568 HNRNPUQ00839 825 aaKnown RBP eCLIP18.5■□□□□ 0.55
DDR1-225ENST00000376568 DISP1Q96F81 1524 aa18.49■□□□□ 0.55
DDR1-225ENST00000376568 NUP160Q12769 1436 aa18.49■□□□□ 0.55
DDR1-225ENST00000376568 CEP170Q5SW79 1584 aa18.49■□□□□ 0.55
DDR1-225ENST00000376568 C9orf84Q5VXU9 1444 aa18.48■□□□□ 0.55
DDR1-225ENST00000376568 ST20-MTHFSA0A0A6YYL1 179 aa18.48■□□□□ 0.55
DDR1-225ENST00000376568 ABCA5Q8WWZ7 1642 aa18.47■□□□□ 0.55
DDR1-225ENST00000376568 ERCC6L2Q5T890 1561 aa18.47■□□□□ 0.55
DDR1-225ENST00000376568 NEUROD2Q15784 382 aa18.46■□□□□ 0.55
DDR1-225ENST00000376568 HECW1Q76N89 1606 aa18.45■□□□□ 0.54
DDR1-225ENST00000376568 SLC26A8Q96RN1 970 aa18.45■□□□□ 0.54
DDR1-225ENST00000376568 ROCK2O75116 1388 aaKnown RBP18.44■□□□□ 0.54
DDR1-225ENST00000376568 PAK3O75914 559 aaPredicted RBP18.43■□□□□ 0.54
DDR1-225ENST00000376568 HAP1P54257 671 aaPredicted RBP18.43■□□□□ 0.54
DDR1-225ENST00000376568 CCDC144AA2RUR9 1427 aa18.43■□□□□ 0.54
DDR1-225ENST00000376568 NBPF1Q3BBV0 1214 aa18.43■□□□□ 0.54
DDR1-225ENST00000376568 PBRM1Q86U86 1689 aa18.42■□□□□ 0.54
DDR1-225ENST00000376568 MINK1Q8N4C8 1332 aaPredicted RBP18.42■□□□□ 0.54
DDR1-225ENST00000376568 CFAP70Q5T0N1 1121 aa18.42■□□□□ 0.54
DDR1-225ENST00000376568 PTPRKQ15262 1439 aa18.4■□□□□ 0.54
DDR1-225ENST00000376568 EID1Q9Y6B2 187 aa18.39■□□□□ 0.53
DDR1-225ENST00000376568 DAPK1P53355 1430 aa18.39■□□□□ 0.53
DDR1-225ENST00000376568 RRBP1Q9P2E9 1410 aaKnown RBP18.39■□□□□ 0.53
DDR1-225ENST00000376568 KNSTRNQ9Y448 316 aa18.39■□□□□ 0.53
DDR1-225ENST00000376568 ADGRL1O94910 1474 aa18.38■□□□□ 0.53
DDR1-225ENST00000376568 EHBP1L1Q8N3D4 1523 aa18.38■□□□□ 0.53
DDR1-225ENST00000376568 ABCC5O15440 1437 aa18.38■□□□□ 0.53
DDR1-225ENST00000376568 AEBP2Q6ZN18 517 aaPredicted RBP18.37■□□□□ 0.53
DDR1-225ENST00000376568 FANCAO15360 1455 aa18.37■□□□□ 0.53
DDR1-225ENST00000376568 IRX6P78412 446 aaPredicted RBP18.37■□□□□ 0.53
DDR1-225ENST00000376568 KIAA0556O60303 1618 aa18.37■□□□□ 0.53
DDR1-225ENST00000376568 GPATCH8Q9UKJ3 1502 aaKnown RBP18.36■□□□□ 0.53
DDR1-225ENST00000376568 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.35■□□□□ 0.53
DDR1-225ENST00000376568 NBPF8Q3BBV2 869 aa18.34■□□□□ 0.53
DDR1-225ENST00000376568 CAMSAP2Q08AD1 1489 aa18.34■□□□□ 0.53
DDR1-225ENST00000376568 TRAPPC8Q9Y2L5 1435 aa18.33■□□□□ 0.53
DDR1-225ENST00000376568 TMF1P82094 1093 aa18.33■□□□□ 0.52
DDR1-225ENST00000376568 TXNDC2Q86VQ3 553 aa18.32■□□□□ 0.52
DDR1-225ENST00000376568 NAIPQ13075 1403 aa18.32■□□□□ 0.52
DDR1-225ENST00000376568 UGGT2Q9NYU1 1516 aa18.32■□□□□ 0.52
DDR1-225ENST00000376568 HDGFP51858 240 aaKnown RBP18.32■□□□□ 0.52
DDR1-225ENST00000376568 PLEKHH2Q8IVE3 1493 aa18.32■□□□□ 0.52
DDR1-225ENST00000376568 RAPGEF6Q8TEU7 1601 aa18.31■□□□□ 0.52
DDR1-225ENST00000376568 NEFMP07197 916 aa18.3■□□□□ 0.52
DDR1-225ENST00000376568 CLSPNQ9HAW4 1339 aa18.3■□□□□ 0.52
DDR1-225ENST00000376568 AKNAQ7Z591 1439 aa18.29■□□□□ 0.52
DDR1-225ENST00000376568 MIA2Q96PC5 1412 aa18.29■□□□□ 0.52
DDR1-225ENST00000376568 U2SURPO15042 1029 aaKnown RBP18.29■□□□□ 0.52
DDR1-225ENST00000376568 PELP1Q8IZL8 1130 aaKnown RBP18.28■□□□□ 0.52
DDR1-225ENST00000376568 GTF3C3Q9Y5Q9 886 aa18.28■□□□□ 0.52
DDR1-225ENST00000376568 SUPT6HQ7KZ85 1726 aaKnown RBP18.28■□□□□ 0.52
DDR1-225ENST00000376568 WDR43Q15061 677 aaKnown RBP eCLIP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms