RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 MYO5CQ9NQX4 1742 aa24.65■■□□□ 1.54
CLCN6-204ENST00000376491 RIMS1Q86UR5 1692 aaKnown RBP24.64■■□□□ 1.53
CLCN6-204ENST00000376491 MAGI2Q86UL8 1455 aa24.63■■□□□ 1.53
CLCN6-204ENST00000376491 POGZQ7Z3K3 1410 aa24.62■■□□□ 1.53
CLCN6-204ENST00000376491 CDK11AQ9UQ88 783 aaPredicted RBP24.62■■□□□ 1.53
CLCN6-204ENST00000376491 TROQ12816 1431 aaPredicted RBP24.61■■□□□ 1.53
CLCN6-204ENST00000376491 EFCAB2Q5VUJ9 269 aa24.59■■□□□ 1.53
CLCN6-204ENST00000376491 PCF11O94913 1555 aaKnown RBP24.57■■□□□ 1.52
CLCN6-204ENST00000376491 LMTK3Q96Q04 1460 aa24.56■■□□□ 1.52
CLCN6-204ENST00000376491 MLECQ14165 292 aa24.53■■□□□ 1.52
CLCN6-204ENST00000376491 CLIP1P30622 1438 aa24.52■■□□□ 1.52
CLCN6-204ENST00000376491 ARHGAP5Q13017 1502 aa24.52■■□□□ 1.52
CLCN6-204ENST00000376491 ATP10AO60312 1499 aa24.51■■□□□ 1.51
CLCN6-204ENST00000376491 CDC42BPBQ9Y5S2 1711 aa24.51■■□□□ 1.51
CLCN6-204ENST00000376491 FER1L4A9Z1Z3 1794 aa24.5■■□□□ 1.51
CLCN6-204ENST00000376491 PLPPR3Q6T4P5 718 aa24.5■■□□□ 1.51
CLCN6-204ENST00000376491 CASKIN1Q8WXD9 1431 aa24.5■■□□□ 1.51
CLCN6-204ENST00000376491 C9orf84Q5VXU9 1444 aa24.49■■□□□ 1.51
CLCN6-204ENST00000376491 AFAP1Q8N556 730 aa24.48■■□□□ 1.51
CLCN6-204ENST00000376491 KDM5CP41229 1560 aa24.47■■□□□ 1.51
CLCN6-204ENST00000376491 ZNF518AQ6AHZ1 1483 aa24.47■■□□□ 1.51
CLCN6-204ENST00000376491 ARHGEF12Q9NZN5 1544 aa24.45■■□□□ 1.51
CLCN6-204ENST00000376491 CCDC18Q5T9S5 1454 aa24.45■■□□□ 1.51
CLCN6-204ENST00000376491 HSPA2P54652 639 aa24.44■■□□□ 1.5
CLCN6-204ENST00000376491 PREX2Q70Z35 1606 aa24.43■■□□□ 1.5
CLCN6-204ENST00000376491 CDC42BPAQ5VT25 1732 aa24.39■■□□□ 1.5
CLCN6-204ENST00000376491 DIP2CQ9Y2E4 1556 aa24.39■■□□□ 1.5
CLCN6-204ENST00000376491 FYCO1Q9BQS8 1478 aa24.38■■□□□ 1.49
CLCN6-204ENST00000376491 TRAPPC8Q9Y2L5 1435 aa24.38■■□□□ 1.49
CLCN6-204ENST00000376491 ABCC1P33527 1531 aa24.38■■□□□ 1.49
CLCN6-204ENST00000376491 ABCA6Q8N139 1617 aa24.37■■□□□ 1.49
CLCN6-204ENST00000376491 FBXO41Q8TF61 875 aa24.37■■□□□ 1.49
CLCN6-204ENST00000376491 MLH3Q9UHC1 1453 aa24.37■■□□□ 1.49
CLCN6-204ENST00000376491 ITSN2Q9NZM3 1697 aa24.37■■□□□ 1.49
CLCN6-204ENST00000376491 MYT1LQ9UL68 1186 aa24.36■■□□□ 1.49
CLCN6-204ENST00000376491 CEBPAP49715 358 aaPredicted RBP24.35■■□□□ 1.49
CLCN6-204ENST00000376491 REREQ9P2R6 1566 aa24.34■■□□□ 1.49
CLCN6-204ENST00000376491 KIDINS220Q9ULH0 1771 aa24.3■■□□□ 1.48
CLCN6-204ENST00000376491 PREX1Q8TCU6 1659 aa24.29■■□□□ 1.48
CLCN6-204ENST00000376491 AGLP35573 1532 aa24.27■■□□□ 1.48
CLCN6-204ENST00000376491 GPATCH8Q9UKJ3 1502 aaKnown RBP24.27■■□□□ 1.48
CLCN6-204ENST00000376491 SAMD9LQ8IVG5 1584 aa24.27■■□□□ 1.48
CLCN6-204ENST00000376491 SETD1BQ9UPS6 1966 aaKnown RBP24.26■■□□□ 1.47
CLCN6-204ENST00000376491 ZNF777Q9ULD5 760 aaPredicted RBP24.25■■□□□ 1.47
CLCN6-204ENST00000376491 C3P01024 1663 aa24.22■■□□□ 1.47
CLCN6-204ENST00000376491 SYCP2Q9BX26 1530 aa24.22■■□□□ 1.47
CLCN6-204ENST00000376491 HNRNPMP52272 730 aaKnown RBP eCLIP24.2■■□□□ 1.46
CLCN6-204ENST00000376491 STRCQ7RTU9 1775 aa24.18■■□□□ 1.46
CLCN6-204ENST00000376491 UHRF1BP1Q6BDS2 1440 aa24.18■■□□□ 1.46
CLCN6-204ENST00000376491 CFDP1Q9UEE9 299 aaPredicted RBP24.16■■□□□ 1.46
CLCN6-204ENST00000376491 KIAA1107Q9UPP5 1409 aa24.16■■□□□ 1.46
CLCN6-204ENST00000376491 MTUS2Q5JR59 1369 aa24.15■■□□□ 1.46
CLCN6-204ENST00000376491 CCNB3Q8WWL7 1395 aa24.15■■□□□ 1.46
CLCN6-204ENST00000376491 SPAG9O60271 1321 aaKnown RBP24.14■■□□□ 1.46
CLCN6-204ENST00000376491 CERKQ8TCT0 537 aa24.13■■□□□ 1.45
CLCN6-204ENST00000376491 ESF1Q9H501 851 aaKnown RBP24.13■■□□□ 1.45
CLCN6-204ENST00000376491 SUPT6HQ7KZ85 1726 aaKnown RBP24.13■■□□□ 1.45
CLCN6-204ENST00000376491 ATP7AQ04656 1500 aa24.12■■□□□ 1.45
CLCN6-204ENST00000376491 PLEKHH2Q8IVE3 1493 aa24.12■■□□□ 1.45
CLCN6-204ENST00000376491 INO80Q9ULG1 1556 aaPredicted RBP24.11■■□□□ 1.45
CLCN6-204ENST00000376491 CNTLNQ9NXG0 1405 aa24.1■■□□□ 1.45
CLCN6-204ENST00000376491 TIAM1Q13009 1591 aa24.09■■□□□ 1.45
CLCN6-204ENST00000376491 CEP162Q5TB80 1403 aa24.08■■□□□ 1.44
CLCN6-204ENST00000376491 ZNF644Q9H582 1327 aaPredicted RBP24.08■■□□□ 1.44
CLCN6-204ENST00000376491 PLXNC1O60486 1568 aa24.08■■□□□ 1.44
CLCN6-204ENST00000376491 EHBP1L1Q8N3D4 1523 aa24.07■■□□□ 1.44
CLCN6-204ENST00000376491 MROH2AA6NES4 1674 aa24.07■■□□□ 1.44
CLCN6-204ENST00000376491 A2MP01023 1474 aa24.06■■□□□ 1.44
CLCN6-204ENST00000376491 DMRT2Q9Y5R5 561 aa24.05■■□□□ 1.44
CLCN6-204ENST00000376491 ZMYM3Q14202 1370 aa24.03■■□□□ 1.44
CLCN6-204ENST00000376491 MBD5Q9P267 1494 aa24.03■■□□□ 1.44
CLCN6-204ENST00000376491 CLTCQ00610 1675 aaKnown RBP24.01■■□□□ 1.43
CLCN6-204ENST00000376491 NPATQ14207 1427 aa24.01■■□□□ 1.43
CLCN6-204ENST00000376491 PTPRTO14522 1441 aa24■■□□□ 1.43
CLCN6-204ENST00000376491 ADGBQ8N7X0 1667 aa23.99■■□□□ 1.43
CLCN6-204ENST00000376491 NCOA1Q15788 1441 aa23.97■■□□□ 1.43
CLCN6-204ENST00000376491 GGT6Q6P531 493 aa23.97■■□□□ 1.43
CLCN6-204ENST00000376491 NCOA2Q15596 1464 aa23.94■■□□□ 1.42
CLCN6-204ENST00000376491 RTEL1-TNFRSF6BF6WH68 1400 aa23.94■■□□□ 1.42
CLCN6-204ENST00000376491 CAMSAP1Q5T5Y3 1602 aa23.93■■□□□ 1.42
CLCN6-204ENST00000376491 PTPRKQ15262 1439 aa23.93■■□□□ 1.42
CLCN6-204ENST00000376491 PPP6R1Q9UPN7 881 aa23.9■■□□□ 1.42
CLCN6-204ENST00000376491 MYO3AQ8NEV4 1616 aa23.9■■□□□ 1.42
CLCN6-204ENST00000376491 DHX29Q7Z478 1369 aaKnown RBP23.9■■□□□ 1.42
CLCN6-204ENST00000376491 CAMSAP2Q08AD1 1489 aa23.89■■□□□ 1.42
CLCN6-204ENST00000376491 LTBP4Q8N2S1 1624 aa23.89■■□□□ 1.42
CLCN6-204ENST00000376491 LOC105371045A0A1W2PR82 267 aa23.89■■□□□ 1.41
CLCN6-204ENST00000376491 ZNF142P52746 1687 aaPredicted RBP23.89■■□□□ 1.41
CLCN6-204ENST00000376491 CCDC141Q6ZP82 1450 aa23.87■■□□□ 1.41
CLCN6-204ENST00000376491 NCKAP5LQ9HCH0 1330 aa23.85■■□□□ 1.41
CLCN6-204ENST00000376491 CEP170BQ9Y4F5 1589 aaPredicted RBP23.85■■□□□ 1.41
CLCN6-204ENST00000376491 VPS8Q8N3P4 1428 aa23.84■■□□□ 1.41
CLCN6-204ENST00000376491 RSPH4AQ5TD94 716 aa23.83■■□□□ 1.41
CLCN6-204ENST00000376491 KIF3BO15066 747 aa23.82■■□□□ 1.4
CLCN6-204ENST00000376491 PLA2R1Q13018 1463 aa23.81■■□□□ 1.4
CLCN6-204ENST00000376491 LRRC9Q6ZRR7 1453 aa23.81■■□□□ 1.4
CLCN6-204ENST00000376491 ARHGEF5Q12774 1597 aa23.81■■□□□ 1.4
CLCN6-204ENST00000376491 TCOF1Q13428 1488 aaKnown RBP23.79■■□□□ 1.4
CLCN6-204ENST00000376491 PKD2Q13563 968 aa23.76■■□□□ 1.39
CLCN6-204ENST00000376491 KANK4Q5T7N3 995 aaPredicted RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms