RNA–Protein interactions for RNA: ENST00000376324.7

CHRDL2-202, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,665 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-202ENST00000376324 ZNF644Q9H582 1327 aaPredicted RBP22.46■■□□□ 1.19
CHRDL2-202ENST00000376324 ARHGAP5Q13017 1502 aa22.45■■□□□ 1.18
CHRDL2-202ENST00000376324 FAM69CQ0P6D2 419 aa22.43■■□□□ 1.18
CHRDL2-202ENST00000376324 PLCH2O75038 1416 aa22.42■■□□□ 1.18
CHRDL2-202ENST00000376324 DIP2BQ9P265 1576 aa22.41■■□□□ 1.18
CHRDL2-202ENST00000376324 TCOF1Q13428 1488 aaKnown RBP22.41■■□□□ 1.18
CHRDL2-202ENST00000376324 CD109Q6YHK3 1445 aa22.4■■□□□ 1.18
CHRDL2-202ENST00000376324 CAMSAP2Q08AD1 1489 aa22.4■■□□□ 1.18
CHRDL2-202ENST00000376324 EFCAB2Q5VUJ9 269 aa22.38■■□□□ 1.17
CHRDL2-202ENST00000376324 GLI2P10070 1586 aa22.37■■□□□ 1.17
CHRDL2-202ENST00000376324 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.37■■□□□ 1.17
CHRDL2-202ENST00000376324 SAMD9LQ8IVG5 1584 aa22.36■■□□□ 1.17
CHRDL2-202ENST00000376324 MAP3K4Q9Y6R4 1608 aa22.34■■□□□ 1.17
CHRDL2-202ENST00000376324 KIF13AQ9H1H9 1805 aa22.34■■□□□ 1.17
CHRDL2-202ENST00000376324 HNRNPMP52272 730 aaKnown RBP eCLIP22.33■■□□□ 1.16
CHRDL2-202ENST00000376324 FANCAO15360 1455 aa22.33■■□□□ 1.16
CHRDL2-202ENST00000376324 ARAP3Q8WWN8 1544 aa22.33■■□□□ 1.16
CHRDL2-202ENST00000376324 TSPOAP1O95153 1857 aa22.32■■□□□ 1.16
CHRDL2-202ENST00000376324 SYCP2Q9BX26 1530 aa22.29■■□□□ 1.16
CHRDL2-202ENST00000376324 CHIC2Q9UKJ5 165 aa22.28■■□□□ 1.16
CHRDL2-202ENST00000376324 TRHP20396 242 aaPredicted RBP22.27■■□□□ 1.16
CHRDL2-202ENST00000376324 DNMT1P26358 1616 aaKnown RBP22.27■■□□□ 1.16
CHRDL2-202ENST00000376324 DAPK1P53355 1430 aa22.27■■□□□ 1.16
CHRDL2-202ENST00000376324 PTPRKQ15262 1439 aa22.27■■□□□ 1.16
CHRDL2-202ENST00000376324 ABCC5O15440 1437 aa22.26■■□□□ 1.15
CHRDL2-202ENST00000376324 PLEKHH2Q8IVE3 1493 aa22.26■■□□□ 1.15
CHRDL2-202ENST00000376324 AKNAQ7Z591 1439 aa22.25■■□□□ 1.15
CHRDL2-202ENST00000376324 ABCC1P33527 1531 aa22.25■■□□□ 1.15
CHRDL2-202ENST00000376324 ARHGEF12Q9NZN5 1544 aa22.24■■□□□ 1.15
CHRDL2-202ENST00000376324 CFAP74Q9C0B2 1584 aa22.24■■□□□ 1.15
CHRDL2-202ENST00000376324 ADGRL1O94910 1474 aa22.23■■□□□ 1.15
CHRDL2-202ENST00000376324 MBD5Q9P267 1494 aa22.23■■□□□ 1.15
CHRDL2-202ENST00000376324 KIAA1107Q9UPP5 1409 aa22.22■■□□□ 1.15
CHRDL2-202ENST00000376324 PPRC1Q5VV67 1664 aaKnown RBP22.21■■□□□ 1.15
CHRDL2-202ENST00000376324 ARHGEF5Q12774 1597 aa22.21■■□□□ 1.15
CHRDL2-202ENST00000376324 SCAPERQ9BY12 1400 aa22.21■■□□□ 1.15
CHRDL2-202ENST00000376324 CCDC141Q6ZP82 1450 aa22.2■■□□□ 1.14
CHRDL2-202ENST00000376324 CROCC2H7BZ55 1655 aa22.2■■□□□ 1.14
CHRDL2-202ENST00000376324 NEO1Q92859 1461 aa22.19■■□□□ 1.14
CHRDL2-202ENST00000376324 TRAPPC8Q9Y2L5 1435 aa22.19■■□□□ 1.14
CHRDL2-202ENST00000376324 TSPY4P0CV99 314 aa22.19■■□□□ 1.14
CHRDL2-202ENST00000376324 TSPY10P0CW01 314 aa22.19■■□□□ 1.14
CHRDL2-202ENST00000376324 RSPH4AQ5TD94 716 aa22.17■■□□□ 1.14
CHRDL2-202ENST00000376324 RRP7BPQ9NSQ0 103 aa22.17■■□□□ 1.14
CHRDL2-202ENST00000376324 TEX14Q8IWB6 1497 aa22.17■■□□□ 1.14
CHRDL2-202ENST00000376324 AFAP1Q8N556 730 aa22.17■■□□□ 1.14
CHRDL2-202ENST00000376324 C9orf84Q5VXU9 1444 aa22.15■■□□□ 1.14
CHRDL2-202ENST00000376324 ADGBQ8N7X0 1667 aa22.13■■□□□ 1.13
CHRDL2-202ENST00000376324 SHANK2Q9UPX8 1470 aa22.13■■□□□ 1.13
CHRDL2-202ENST00000376324 MYT1LQ9UL68 1186 aa22.11■■□□□ 1.13
CHRDL2-202ENST00000376324 DENND4BO75064 1496 aaPredicted RBP22.1■■□□□ 1.13
CHRDL2-202ENST00000376324 SPAG9O60271 1321 aaKnown RBP22.1■■□□□ 1.13
CHRDL2-202ENST00000376324 RAPGEF3O95398 923 aa22.1■■□□□ 1.13
CHRDL2-202ENST00000376324 SETD5Q9C0A6 1442 aa22.09■■□□□ 1.13
CHRDL2-202ENST00000376324 ANKRD30AQ9BXX3 1397 aa22.09■■□□□ 1.13
CHRDL2-202ENST00000376324 POGZQ7Z3K3 1410 aa22.09■■□□□ 1.13
CHRDL2-202ENST00000376324 ROCK1Q13464 1354 aa22.09■■□□□ 1.13
CHRDL2-202ENST00000376324 ZNF518AQ6AHZ1 1483 aa22.08■■□□□ 1.12
CHRDL2-202ENST00000376324 HFM1A2PYH4 1435 aa22.07■■□□□ 1.12
CHRDL2-202ENST00000376324 NAIPQ13075 1403 aa22.07■■□□□ 1.12
CHRDL2-202ENST00000376324 NCOA1Q15788 1441 aa22.07■■□□□ 1.12
CHRDL2-202ENST00000376324 ADGRL2O95490 1459 aa22.07■■□□□ 1.12
CHRDL2-202ENST00000376324 MAST1Q9Y2H9 1570 aa22.07■■□□□ 1.12
CHRDL2-202ENST00000376324 RAB3GAP2Q9H2M9 1393 aa22.06■■□□□ 1.12
CHRDL2-202ENST00000376324 GCC2Q8IWJ2 1684 aa22.04■■□□□ 1.12
CHRDL2-202ENST00000376324 RICTORQ6R327 1708 aa22.03■■□□□ 1.12
CHRDL2-202ENST00000376324 KIF15Q9NS87 1388 aa22.02■■□□□ 1.12
CHRDL2-202ENST00000376324 ZFYVE16Q7Z3T8 1539 aa22.02■■□□□ 1.12
CHRDL2-202ENST00000376324 ATP7AQ04656 1500 aa22.01■■□□□ 1.11
CHRDL2-202ENST00000376324 KDM5CP41229 1560 aa22.01■■□□□ 1.11
CHRDL2-202ENST00000376324 INO80Q9ULG1 1556 aaPredicted RBP22■■□□□ 1.11
CHRDL2-202ENST00000376324 RTEL1-TNFRSF6BF6WH68 1400 aa22■■□□□ 1.11
CHRDL2-202ENST00000376324 KDM6BO15054 1643 aa22■■□□□ 1.11
CHRDL2-202ENST00000376324 FRMPD1Q5SYB0 1578 aa21.99■■□□□ 1.11
CHRDL2-202ENST00000376324 COL17A1Q9UMD9 1497 aaPredicted RBP21.99■■□□□ 1.11
CHRDL2-202ENST00000376324 PLXNC1O60486 1568 aa21.99■■□□□ 1.11
CHRDL2-202ENST00000376324 KIDINS220Q9ULH0 1771 aa21.98■■□□□ 1.11
CHRDL2-202ENST00000376324 HECW2Q9P2P5 1572 aa21.97■■□□□ 1.11
CHRDL2-202ENST00000376324 ANKRD50Q9ULJ7 1429 aa21.95■■□□□ 1.1
CHRDL2-202ENST00000376324 MLH3Q9UHC1 1453 aa21.95■■□□□ 1.1
CHRDL2-202ENST00000376324 DUOX2Q9NRD8 1548 aa21.92■■□□□ 1.1
CHRDL2-202ENST00000376324 TRIM52Q96A61 297 aa21.92■■□□□ 1.1
CHRDL2-202ENST00000376324 ZMYM4Q5VZL5 1548 aa21.91■■□□□ 1.1
CHRDL2-202ENST00000376324 ABCA6Q8N139 1617 aa21.9■■□□□ 1.1
CHRDL2-202ENST00000376324 HRCP23327 699 aa21.9■■□□□ 1.1
CHRDL2-202ENST00000376324 YEATS2Q9ULM3 1422 aa21.9■■□□□ 1.1
CHRDL2-202ENST00000376324 CCER1Q8TC90 406 aaPredicted RBP21.88■■□□□ 1.09
CHRDL2-202ENST00000376324 DIP2CQ9Y2E4 1556 aa21.86■■□□□ 1.09
CHRDL2-202ENST00000376324 A2MP01023 1474 aa21.86■■□□□ 1.09
CHRDL2-202ENST00000376324 ERBINQ96RT1 1412 aa21.86■■□□□ 1.09
CHRDL2-202ENST00000376324 DHX29Q7Z478 1369 aaKnown RBP21.85■■□□□ 1.09
CHRDL2-202ENST00000376324 MAGI2Q86UL8 1455 aa21.85■■□□□ 1.09
CHRDL2-202ENST00000376324 DHX57Q6P158 1386 aaKnown RBP21.82■■□□□ 1.08
CHRDL2-202ENST00000376324 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.82■■□□□ 1.08
CHRDL2-202ENST00000376324 KIF3BO15066 747 aa21.82■■□□□ 1.08
CHRDL2-202ENST00000376324 ATP10AO60312 1499 aa21.79■■□□□ 1.08
CHRDL2-202ENST00000376324 NUP155O75694 1391 aa21.79■■□□□ 1.08
CHRDL2-202ENST00000376324 ARHGEF40Q8TER5 1519 aa21.78■■□□□ 1.08
CHRDL2-202ENST00000376324 EIF2AK4Q9P2K8 1649 aaKnown RBP21.76■■□□□ 1.07
CHRDL2-202ENST00000376324 ACIN1Q9UKV3 1341 aaKnown RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms