RNA–Protein interactions for RNA: ENST00000376265.2

CACNA1F-203, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACNA1F, Length 6,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-203ENST00000376265 NUP155O75694 1391 aa16.42■□□□□ 0.22
CACNA1F-203ENST00000376265 ROCK2O75116 1388 aaKnown RBP16.41■□□□□ 0.22
CACNA1F-203ENST00000376265 ANKRD30AQ9BXX3 1397 aa16.41■□□□□ 0.22
CACNA1F-203ENST00000376265 B4GALNT3Q6L9W6 998 aa16.4■□□□□ 0.22
CACNA1F-203ENST00000376265 CCER2I3L3R5 266 aa16.39■□□□□ 0.21
CACNA1F-203ENST00000376265 EFCAB2Q5VUJ9 269 aa16.39■□□□□ 0.21
CACNA1F-203ENST00000376265 GOLGA6L22H0YM25 854 aa16.38■□□□□ 0.21
CACNA1F-203ENST00000376265 HNRNPMP52272 730 aaKnown RBP eCLIP16.38■□□□□ 0.21
CACNA1F-203ENST00000376265 KTN1Q86UP2 1357 aaKnown RBP16.37■□□□□ 0.21
CACNA1F-203ENST00000376265 MS4A1P11836 297 aa16.36■□□□□ 0.21
CACNA1F-203ENST00000376265 TPRNQ4KMQ1 711 aa16.36■□□□□ 0.21
CACNA1F-203ENST00000376265 OS9Q13438 667 aaPredicted RBP16.34■□□□□ 0.21
CACNA1F-203ENST00000376265 CHMP4BQ9H444 224 aaKnown RBP16.34■□□□□ 0.21
CACNA1F-203ENST00000376265 RUSC2Q8N2Y8 1516 aa16.33■□□□□ 0.21
CACNA1F-203ENST00000376265 CCDC18Q5T9S5 1454 aa16.33■□□□□ 0.2
CACNA1F-203ENST00000376265 HDGFL2Q7Z4V5 671 aaPredicted RBP16.32■□□□□ 0.2
CACNA1F-203ENST00000376265 FANCD2Q9BXW9 1451 aa16.31■□□□□ 0.2
CACNA1F-203ENST00000376265 KIF3BO15066 747 aa16.31■□□□□ 0.2
CACNA1F-203ENST00000376265 NOP58Q9Y2X3 529 aaKnown RBP16.29■□□□□ 0.2
CACNA1F-203ENST00000376265 TRIM44Q96DX7 344 aaPredicted RBP16.29■□□□□ 0.2
CACNA1F-203ENST00000376265 NPHP1O15259 732 aa16.28■□□□□ 0.2
CACNA1F-203ENST00000376265 JPH4Q96JJ6 628 aa16.27■□□□□ 0.2
CACNA1F-203ENST00000376265 RTN4Q9NQC3 1192 aaKnown RBP16.27■□□□□ 0.2
CACNA1F-203ENST00000376265 L3MBTL2Q969R5 705 aa16.27■□□□□ 0.19
CACNA1F-203ENST00000376265 SPAG9O60271 1321 aaKnown RBP16.26■□□□□ 0.19
CACNA1F-203ENST00000376265 RTF1Q92541 710 aaKnown RBP16.26■□□□□ 0.19
CACNA1F-203ENST00000376265 EIF3AQ14152 1382 aaKnown RBP16.26■□□□□ 0.19
CACNA1F-203ENST00000376265 HSP90AB1P08238 724 aaKnown RBP16.26■□□□□ 0.19
CACNA1F-203ENST00000376265 RALBP1Q15311 655 aa16.25■□□□□ 0.19
CACNA1F-203ENST00000376265 NUTM2DQ5VT03 806 aaPredicted RBP16.25■□□□□ 0.19
CACNA1F-203ENST00000376265 TAOK2Q9UL54 1235 aa16.25■□□□□ 0.19
CACNA1F-203ENST00000376265 PAK3O75914 559 aaPredicted RBP16.25■□□□□ 0.19
CACNA1F-203ENST00000376265 CDK11BP21127 795 aaKnown RBP16.24■□□□□ 0.19
CACNA1F-203ENST00000376265 U2AF1L5P0DN76 240 aaPredicted RBP16.23■□□□□ 0.19
CACNA1F-203ENST00000376265 U2AF1Q01081 240 aaKnown RBP eCLIP16.23■□□□□ 0.19
CACNA1F-203ENST00000376265 ZRSR1Q15695 479 aaKnown RBP16.23■□□□□ 0.19
CACNA1F-203ENST00000376265 DEKP35659 375 aaKnown RBP16.21■□□□□ 0.19
CACNA1F-203ENST00000376265 KCNJ4P48050 445 aa16.21■□□□□ 0.19
CACNA1F-203ENST00000376265 RBM19Q9Y4C8 960 aaKnown RBP16.21■□□□□ 0.19
CACNA1F-203ENST00000376265 PTMAP06454 111 aaKnown RBP16.21■□□□□ 0.18
CACNA1F-203ENST00000376265 WASHC2CQ9Y4E1 1318 aa16.2■□□□□ 0.18
CACNA1F-203ENST00000376265 RSPH4AQ5TD94 716 aa16.2■□□□□ 0.18
CACNA1F-203ENST00000376265 RCAN3Q9UKA8 241 aa16.19■□□□□ 0.18
CACNA1F-203ENST00000376265 FGD1P98174 961 aa16.19■□□□□ 0.18
CACNA1F-203ENST00000376265 NAP1L2Q9ULW6 460 aaPredicted RBP16.18■□□□□ 0.18
CACNA1F-203ENST00000376265 ERICH6BQ5W0A0 696 aa16.17■□□□□ 0.18
CACNA1F-203ENST00000376265 FGD5Q6ZNL6 1462 aa16.16■□□□□ 0.18
CACNA1F-203ENST00000376265 GOLGA2Q08379 1002 aa16.16■□□□□ 0.18
CACNA1F-203ENST00000376265 HSCBQ8IWL3 235 aa16.16■□□□□ 0.18
CACNA1F-203ENST00000376265 APBB1O00213 710 aa16.16■□□□□ 0.18
CACNA1F-203ENST00000376265 IPO8O15397 1037 aaKnown RBP16.15■□□□□ 0.18
CACNA1F-203ENST00000376265 CCDC146Q8IYE0 955 aa16.15■□□□□ 0.18
CACNA1F-203ENST00000376265 DHX57Q6P158 1386 aaKnown RBP16.15■□□□□ 0.18
CACNA1F-203ENST00000376265 ITPRIPQ8IWB1 547 aa16.14■□□□□ 0.17
CACNA1F-203ENST00000376265 SPRYD3Q8NCJ5 442 aa16.14■□□□□ 0.17
CACNA1F-203ENST00000376265 CALD1Q05682 793 aaKnown RBP16.14■□□□□ 0.17
CACNA1F-203ENST00000376265 CSB-PGBD3P0DP91 1061 aa16.13■□□□□ 0.17
CACNA1F-203ENST00000376265 TERF2IPQ9NYB0 399 aa16.13■□□□□ 0.17
CACNA1F-203ENST00000376265 RAD54L2Q9Y4B4 1467 aa16.12■□□□□ 0.17
CACNA1F-203ENST00000376265 PTPRGP23470 1445 aa16.12■□□□□ 0.17
CACNA1F-203ENST00000376265 TSHZ2Q9NRE2 1034 aa16.12■□□□□ 0.17
CACNA1F-203ENST00000376265 CCDC144AA2RUR9 1427 aa16.12■□□□□ 0.17
CACNA1F-203ENST00000376265 TULP1O00294 542 aaPredicted RBP16.12■□□□□ 0.17
CACNA1F-203ENST00000376265 TRAK1Q9UPV9 953 aa16.12■□□□□ 0.17
CACNA1F-203ENST00000376265 GAPVD1Q14C86 1478 aa16.12■□□□□ 0.17
CACNA1F-203ENST00000376265 NAP1L5Q96NT1 182 aaPredicted RBP16.11■□□□□ 0.17
CACNA1F-203ENST00000376265 EID1Q9Y6B2 187 aa16.11■□□□□ 0.17
CACNA1F-203ENST00000376265 MCCP23508 829 aa16.11■□□□□ 0.17
CACNA1F-203ENST00000376265 PLCB2Q00722 1185 aa16.11■□□□□ 0.17
CACNA1F-203ENST00000376265 DNTTIP2Q5QJE6 756 aaKnown RBP16.09■□□□□ 0.17
CACNA1F-203ENST00000376265 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.08■□□□□ 0.17
CACNA1F-203ENST00000376265 ST20-MTHFSA0A0A6YYL1 179 aa16.07■□□□□ 0.16
CACNA1F-203ENST00000376265 KIF15Q9NS87 1388 aa16.07■□□□□ 0.16
CACNA1F-203ENST00000376265 NLRP13Q86W25 1043 aa16.07■□□□□ 0.16
CACNA1F-203ENST00000376265 RWDD1Q9H446 243 aaPredicted RBP16.07■□□□□ 0.16
CACNA1F-203ENST00000376265 PRDM2Q13029 1718 aa16.07■□□□□ 0.16
CACNA1F-203ENST00000376265 IGF1RP08069 1367 aa16.07■□□□□ 0.16
CACNA1F-203ENST00000376265 NUTM2FA1L443 756 aa16.06■□□□□ 0.16
CACNA1F-203ENST00000376265 NGDNQ8NEJ9 315 aaKnown RBP16.06■□□□□ 0.16
CACNA1F-203ENST00000376265 SMC4Q9NTJ3 1288 aa16.06■□□□□ 0.16
CACNA1F-203ENST00000376265 ZNF330Q9Y3S2 320 aaPredicted RBP16.06■□□□□ 0.16
CACNA1F-203ENST00000376265 PANK3Q9H999 370 aa16.05■□□□□ 0.16
CACNA1F-203ENST00000376265 CFAP44Q96MT7 982 aa16.04■□□□□ 0.16
CACNA1F-203ENST00000376265 UACAQ9BZF9 1416 aa16.03■□□□□ 0.16
CACNA1F-203ENST00000376265 MYBBP1AQ9BQG0 1328 aaKnown RBP16.03■□□□□ 0.16
CACNA1F-203ENST00000376265 STK31Q9BXU1 1019 aa16.02■□□□□ 0.16
CACNA1F-203ENST00000376265 GOLGA6L4A6NEF3 574 aa16.02■□□□□ 0.15
CACNA1F-203ENST00000376265 PMFBP1Q8TBY8 1022 aa16.02■□□□□ 0.15
CACNA1F-203ENST00000376265 AMPHP49418 695 aa16.01■□□□□ 0.15
CACNA1F-203ENST00000376265 PHLDB1Q86UU1 1377 aa16.01■□□□□ 0.15
CACNA1F-203ENST00000376265 LTV1Q96GA3 475 aaPredicted RBP16.01■□□□□ 0.15
CACNA1F-203ENST00000376265 CLUAP1Q96AJ1 413 aa16.01■□□□□ 0.15
CACNA1F-203ENST00000376265 CENPJQ9HC77 1338 aaPredicted RBP16.01■□□□□ 0.15
CACNA1F-203ENST00000376265 KIAA1211Q6ZU35 1233 aa16■□□□□ 0.15
CACNA1F-203ENST00000376265 RRP7AQ9Y3A4 280 aaKnown RBP16■□□□□ 0.15
CACNA1F-203ENST00000376265 USP47Q96K76 1375 aa16■□□□□ 0.15
CACNA1F-203ENST00000376265 TCERG1O14776 1098 aaKnown RBP15.99■□□□□ 0.15
CACNA1F-203ENST00000376265 CYB5RLQ6IPT4 315 aa15.99■□□□□ 0.15
CACNA1F-203ENST00000376265 KIF21BO75037 1637 aa15.98■□□□□ 0.15
CACNA1F-203ENST00000376265 CUX1P39880 1505 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms