RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 RNF39Q9H2S5 420 aa15.99■□□□□ 0.15
PDPN-203ENST00000376061 MYO5CQ9NQX4 1742 aa15.98■□□□□ 0.15
PDPN-203ENST00000376061 ASXL2Q76L83 1435 aa15.98■□□□□ 0.15
PDPN-203ENST00000376061 CYB5RLQ6IPT4 315 aa15.98■□□□□ 0.15
PDPN-203ENST00000376061 GPATCH8Q9UKJ3 1502 aaKnown RBP15.97■□□□□ 0.15
PDPN-203ENST00000376061 TCOF1Q13428 1488 aaKnown RBP15.97■□□□□ 0.15
PDPN-203ENST00000376061 MIA2Q96PC5 1412 aa15.96■□□□□ 0.15
PDPN-203ENST00000376061 MAPKBP1O60336 1514 aa15.96■□□□□ 0.15
PDPN-203ENST00000376061 CDC42BPBQ9Y5S2 1711 aa15.96■□□□□ 0.15
PDPN-203ENST00000376061 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.95■□□□□ 0.14
PDPN-203ENST00000376061 ABCA9Q8IUA7 1624 aa15.95■□□□□ 0.14
PDPN-203ENST00000376061 NPM1P06748 294 aaKnown RBP eCLIP15.92■□□□□ 0.14
PDPN-203ENST00000376061 CAMSAP2Q08AD1 1489 aa15.9■□□□□ 0.14
PDPN-203ENST00000376061 HOXD11P31277 338 aaPredicted RBP15.89■□□□□ 0.13
PDPN-203ENST00000376061 FAM50AQ14320 339 aaKnown RBP15.89■□□□□ 0.13
PDPN-203ENST00000376061 ARAP3Q8WWN8 1544 aa15.89■□□□□ 0.13
PDPN-203ENST00000376061 SAMD9LQ8IVG5 1584 aa15.88■□□□□ 0.13
PDPN-203ENST00000376061 DNMT1P26358 1616 aaKnown RBP15.88■□□□□ 0.13
PDPN-203ENST00000376061 ARHGAP5Q13017 1502 aa15.88■□□□□ 0.13
PDPN-203ENST00000376061 KCNH8Q96L42 1107 aa15.87■□□□□ 0.13
PDPN-203ENST00000376061 CROCC2H7BZ55 1655 aa15.87■□□□□ 0.13
PDPN-203ENST00000376061 CFDP1Q9UEE9 299 aaPredicted RBP15.86■□□□□ 0.13
PDPN-203ENST00000376061 PLCH2O75038 1416 aa15.85■□□□□ 0.13
PDPN-203ENST00000376061 DIP2BQ9P265 1576 aa15.85■□□□□ 0.13
PDPN-203ENST00000376061 GLI2P10070 1586 aa15.83■□□□□ 0.12
PDPN-203ENST00000376061 ZNF644Q9H582 1327 aaPredicted RBP15.83■□□□□ 0.12
PDPN-203ENST00000376061 MAP3K4Q9Y6R4 1608 aa15.82■□□□□ 0.12
PDPN-203ENST00000376061 ARHGEF5Q12774 1597 aa15.82■□□□□ 0.12
PDPN-203ENST00000376061 ABCC1P33527 1531 aa15.82■□□□□ 0.12
PDPN-203ENST00000376061 DAPK1P53355 1430 aa15.81■□□□□ 0.12
PDPN-203ENST00000376061 PTPRKQ15262 1439 aa15.81■□□□□ 0.12
PDPN-203ENST00000376061 ADGBQ8N7X0 1667 aa15.81■□□□□ 0.12
PDPN-203ENST00000376061 ITGAEP38570 1179 aa15.81■□□□□ 0.12
PDPN-203ENST00000376061 SYCP2Q9BX26 1530 aa15.81■□□□□ 0.12
PDPN-203ENST00000376061 CFAP74Q9C0B2 1584 aa15.79■□□□□ 0.12
PDPN-203ENST00000376061 PPP4R3CPQ6ZMV5 832 aa15.79■□□□□ 0.12
PDPN-203ENST00000376061 GCC2Q8IWJ2 1684 aa15.79■□□□□ 0.12
PDPN-203ENST00000376061 ABCC5O15440 1437 aa15.79■□□□□ 0.12
PDPN-203ENST00000376061 KIF13AQ9H1H9 1805 aa15.79■□□□□ 0.12
PDPN-203ENST00000376061 PLEKHH2Q8IVE3 1493 aa15.78■□□□□ 0.12
PDPN-203ENST00000376061 DNAJC5Q9H3Z4 198 aa15.78■□□□□ 0.12
PDPN-203ENST00000376061 ZNF777Q9ULD5 760 aaPredicted RBP15.78■□□□□ 0.12
PDPN-203ENST00000376061 FANCAO15360 1455 aa15.77■□□□□ 0.12
PDPN-203ENST00000376061 MBD5Q9P267 1494 aa15.77■□□□□ 0.12
PDPN-203ENST00000376061 SHANK2Q9UPX8 1470 aa15.77■□□□□ 0.11
PDPN-203ENST00000376061 CD109Q6YHK3 1445 aa15.76■□□□□ 0.11
PDPN-203ENST00000376061 AKNAQ7Z591 1439 aa15.76■□□□□ 0.11
PDPN-203ENST00000376061 CCDC141Q6ZP82 1450 aa15.75■□□□□ 0.11
PDPN-203ENST00000376061 KIAA1107Q9UPP5 1409 aa15.75■□□□□ 0.11
PDPN-203ENST00000376061 ARHGEF12Q9NZN5 1544 aa15.75■□□□□ 0.11
PDPN-203ENST00000376061 EFCAB2Q5VUJ9 269 aa15.74■□□□□ 0.11
PDPN-203ENST00000376061 PPRC1Q5VV67 1664 aaKnown RBP15.73■□□□□ 0.11
PDPN-203ENST00000376061 HFM1A2PYH4 1435 aa15.73■□□□□ 0.11
PDPN-203ENST00000376061 C1QBPQ07021 282 aaKnown RBP15.73■□□□□ 0.11
PDPN-203ENST00000376061 ADGRL2O95490 1459 aa15.73■□□□□ 0.11
PDPN-203ENST00000376061 MAST1Q9Y2H9 1570 aa15.73■□□□□ 0.11
PDPN-203ENST00000376061 ROCK1Q13464 1354 aa15.71■□□□□ 0.11
PDPN-203ENST00000376061 TSPOAP1O95153 1857 aa15.71■□□□□ 0.1
PDPN-203ENST00000376061 NAIPQ13075 1403 aa15.71■□□□□ 0.1
PDPN-203ENST00000376061 C9orf84Q5VXU9 1444 aa15.71■□□□□ 0.1
PDPN-203ENST00000376061 ADGRL1O94910 1474 aa15.7■□□□□ 0.1
PDPN-203ENST00000376061 SETD5Q9C0A6 1442 aa15.7■□□□□ 0.1
PDPN-203ENST00000376061 HNRNPMP52272 730 aaKnown RBP eCLIP15.69■□□□□ 0.1
PDPN-203ENST00000376061 NEO1Q92859 1461 aa15.69■□□□□ 0.1
PDPN-203ENST00000376061 RAB3GAP2Q9H2M9 1393 aa15.68■□□□□ 0.1
PDPN-203ENST00000376061 PLXNC1O60486 1568 aa15.68■□□□□ 0.1
PDPN-203ENST00000376061 TRAPPC8Q9Y2L5 1435 aa15.67■□□□□ 0.1
PDPN-203ENST00000376061 KDM6BO15054 1643 aa15.67■□□□□ 0.1
PDPN-203ENST00000376061 CHIC2Q9UKJ5 165 aa15.67■□□□□ 0.1
PDPN-203ENST00000376061 INO80Q9ULG1 1556 aaPredicted RBP15.67■□□□□ 0.1
PDPN-203ENST00000376061 FAM69CQ0P6D2 419 aa15.66■□□□□ 0.1
PDPN-203ENST00000376061 ZFYVE16Q7Z3T8 1539 aa15.65■□□□□ 0.1
PDPN-203ENST00000376061 NCOA1Q15788 1441 aa15.65■□□□□ 0.1
PDPN-203ENST00000376061 RSPH4AQ5TD94 716 aa15.64■□□□□ 0.09
PDPN-203ENST00000376061 SCAPERQ9BY12 1400 aa15.64■□□□□ 0.09
PDPN-203ENST00000376061 KDM5CP41229 1560 aa15.64■□□□□ 0.09
PDPN-203ENST00000376061 RICTORQ6R327 1708 aa15.63■□□□□ 0.09
PDPN-203ENST00000376061 ANKRD30AQ9BXX3 1397 aa15.63■□□□□ 0.09
PDPN-203ENST00000376061 POGZQ7Z3K3 1410 aa15.63■□□□□ 0.09
PDPN-203ENST00000376061 TEX14Q8IWB6 1497 aa15.63■□□□□ 0.09
PDPN-203ENST00000376061 CNKSR2Q8WXI2 1034 aa15.62■□□□□ 0.09
PDPN-203ENST00000376061 RRP7BPQ9NSQ0 103 aa15.62■□□□□ 0.09
PDPN-203ENST00000376061 ZNF518AQ6AHZ1 1483 aa15.62■□□□□ 0.09
PDPN-203ENST00000376061 RNF216Q9NWF9 866 aaPredicted RBP15.62■□□□□ 0.09
PDPN-203ENST00000376061 ATP7AQ04656 1500 aa15.61■□□□□ 0.09
PDPN-203ENST00000376061 FRMPD1Q5SYB0 1578 aa15.61■□□□□ 0.09
PDPN-203ENST00000376061 HECW2Q9P2P5 1572 aa15.6■□□□□ 0.09
PDPN-203ENST00000376061 TSPY4P0CV99 314 aa15.6■□□□□ 0.09
PDPN-203ENST00000376061 TSPY10P0CW01 314 aa15.6■□□□□ 0.09
PDPN-203ENST00000376061 KIDINS220Q9ULH0 1771 aa15.59■□□□□ 0.09
PDPN-203ENST00000376061 KIF15Q9NS87 1388 aa15.59■□□□□ 0.09
PDPN-203ENST00000376061 RTEL1-TNFRSF6BF6WH68 1400 aa15.58■□□□□ 0.08
PDPN-203ENST00000376061 DENND4BO75064 1496 aaPredicted RBP15.57■□□□□ 0.08
PDPN-203ENST00000376061 HRCP23327 699 aa15.57■□□□□ 0.08
PDPN-203ENST00000376061 DHX57Q6P158 1386 aaKnown RBP15.56■□□□□ 0.08
PDPN-203ENST00000376061 SPAG9O60271 1321 aaKnown RBP15.56■□□□□ 0.08
PDPN-203ENST00000376061 AFAP1Q8N556 730 aa15.56■□□□□ 0.08
PDPN-203ENST00000376061 DUOX2Q9NRD8 1548 aa15.56■□□□□ 0.08
PDPN-203ENST00000376061 ANKRD50Q9ULJ7 1429 aa15.56■□□□□ 0.08
PDPN-203ENST00000376061 ZMYM4Q5VZL5 1548 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms