RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 CCER1Q8TC90 406 aaPredicted RBP16.6■□□□□ 0.25
PDPN-202ENST00000376057 ARHGEF5Q12774 1597 aa16.6■□□□□ 0.25
PDPN-202ENST00000376057 MYO5CQ9NQX4 1742 aa16.6■□□□□ 0.25
PDPN-202ENST00000376057 DAPK1P53355 1430 aa16.6■□□□□ 0.25
PDPN-202ENST00000376057 RAB3GAP2Q9H2M9 1393 aa16.59■□□□□ 0.25
PDPN-202ENST00000376057 TTC37Q6PGP7 1564 aa16.58■□□□□ 0.25
PDPN-202ENST00000376057 SHANK2Q9UPX8 1470 aa16.58■□□□□ 0.24
PDPN-202ENST00000376057 ABCC5O15440 1437 aa16.58■□□□□ 0.24
PDPN-202ENST00000376057 WDR7Q9Y4E6 1490 aa16.58■□□□□ 0.24
PDPN-202ENST00000376057 DHX57Q6P158 1386 aaKnown RBP16.57■□□□□ 0.24
PDPN-202ENST00000376057 ADGBQ8N7X0 1667 aa16.57■□□□□ 0.24
PDPN-202ENST00000376057 CFDP1Q9UEE9 299 aaPredicted RBP16.57■□□□□ 0.24
PDPN-202ENST00000376057 ADGRL2O95490 1459 aa16.57■□□□□ 0.24
PDPN-202ENST00000376057 NAIPQ13075 1403 aa16.56■□□□□ 0.24
PDPN-202ENST00000376057 ABCA9Q8IUA7 1624 aa16.55■□□□□ 0.24
PDPN-202ENST00000376057 PLEKHH2Q8IVE3 1493 aa16.55■□□□□ 0.24
PDPN-202ENST00000376057 PLCH2O75038 1416 aa16.54■□□□□ 0.24
PDPN-202ENST00000376057 SAMD9LQ8IVG5 1584 aa16.53■□□□□ 0.24
PDPN-202ENST00000376057 KIAA1107Q9UPP5 1409 aa16.53■□□□□ 0.24
PDPN-202ENST00000376057 RSPH4AQ5TD94 716 aa16.53■□□□□ 0.24
PDPN-202ENST00000376057 ITGAEP38570 1179 aa16.52■□□□□ 0.23
PDPN-202ENST00000376057 MAST1Q9Y2H9 1570 aa16.51■□□□□ 0.23
PDPN-202ENST00000376057 RIMBP3CA6NJZ7 1639 aa16.51■□□□□ 0.23
PDPN-202ENST00000376057 RIMBP3BA6NNM3 1639 aa16.51■□□□□ 0.23
PDPN-202ENST00000376057 RIMBP3Q9UFD9 1639 aa16.51■□□□□ 0.23
PDPN-202ENST00000376057 MBD5Q9P267 1494 aa16.51■□□□□ 0.23
PDPN-202ENST00000376057 ASXL2Q76L83 1435 aa16.49■□□□□ 0.23
PDPN-202ENST00000376057 MAPKBP1O60336 1514 aa16.49■□□□□ 0.23
PDPN-202ENST00000376057 ZNF644Q9H582 1327 aaPredicted RBP16.48■□□□□ 0.23
PDPN-202ENST00000376057 ARHGAP5Q13017 1502 aa16.47■□□□□ 0.23
PDPN-202ENST00000376057 NCOA1Q15788 1441 aa16.46■□□□□ 0.23
PDPN-202ENST00000376057 CCDC141Q6ZP82 1450 aa16.46■□□□□ 0.23
PDPN-202ENST00000376057 NPM1P06748 294 aaKnown RBP eCLIP16.44■□□□□ 0.22
PDPN-202ENST00000376057 ABCC1P33527 1531 aa16.44■□□□□ 0.22
PDPN-202ENST00000376057 ANKRD30AQ9BXX3 1397 aa16.43■□□□□ 0.22
PDPN-202ENST00000376057 PLXNC1O60486 1568 aa16.42■□□□□ 0.22
PDPN-202ENST00000376057 CFAP74Q9C0B2 1584 aa16.42■□□□□ 0.22
PDPN-202ENST00000376057 C9orf84Q5VXU9 1444 aa16.42■□□□□ 0.22
PDPN-202ENST00000376057 EFCAB2Q5VUJ9 269 aa16.41■□□□□ 0.22
PDPN-202ENST00000376057 SYCP2Q9BX26 1530 aa16.41■□□□□ 0.22
PDPN-202ENST00000376057 GLI2P10070 1586 aa16.4■□□□□ 0.22
PDPN-202ENST00000376057 KDM6BO15054 1643 aa16.39■□□□□ 0.21
PDPN-202ENST00000376057 KCNH8Q96L42 1107 aa16.37■□□□□ 0.21
PDPN-202ENST00000376057 ZNF777Q9ULD5 760 aaPredicted RBP16.37■□□□□ 0.21
PDPN-202ENST00000376057 ARHGEF12Q9NZN5 1544 aa16.37■□□□□ 0.21
PDPN-202ENST00000376057 RTEL1-TNFRSF6BF6WH68 1400 aa16.37■□□□□ 0.21
PDPN-202ENST00000376057 KDM5DQ9BY66 1539 aa16.36■□□□□ 0.21
PDPN-202ENST00000376057 TSPY4P0CV99 314 aa16.36■□□□□ 0.21
PDPN-202ENST00000376057 TSPY10P0CW01 314 aa16.36■□□□□ 0.21
PDPN-202ENST00000376057 TIMELESSQ9UNS1 1208 aa16.36■□□□□ 0.21
PDPN-202ENST00000376057 RRP7BPQ9NSQ0 103 aa16.35■□□□□ 0.21
PDPN-202ENST00000376057 CHIC2Q9UKJ5 165 aa16.35■□□□□ 0.21
PDPN-202ENST00000376057 FANCAO15360 1455 aa16.35■□□□□ 0.21
PDPN-202ENST00000376057 MAP3K4Q9Y6R4 1608 aa16.34■□□□□ 0.21
PDPN-202ENST00000376057 HNRNPMP52272 730 aaKnown RBP eCLIP16.33■□□□□ 0.2
PDPN-202ENST00000376057 ANKRD50Q9ULJ7 1429 aa16.32■□□□□ 0.2
PDPN-202ENST00000376057 DENND4BO75064 1496 aaPredicted RBP16.31■□□□□ 0.2
PDPN-202ENST00000376057 NEO1Q92859 1461 aa16.31■□□□□ 0.2
PDPN-202ENST00000376057 DUOX2Q9NRD8 1548 aa16.3■□□□□ 0.2
PDPN-202ENST00000376057 INO80Q9ULG1 1556 aaPredicted RBP16.3■□□□□ 0.2
PDPN-202ENST00000376057 CD109Q6YHK3 1445 aa16.29■□□□□ 0.2
PDPN-202ENST00000376057 KIF15Q9NS87 1388 aa16.29■□□□□ 0.2
PDPN-202ENST00000376057 UNC13BO14795 1591 aa16.28■□□□□ 0.2
PDPN-202ENST00000376057 ERBINQ96RT1 1412 aa16.28■□□□□ 0.2
PDPN-202ENST00000376057 ZFYVE16Q7Z3T8 1539 aa16.27■□□□□ 0.2
PDPN-202ENST00000376057 TRAPPC8Q9Y2L5 1435 aa16.27■□□□□ 0.2
PDPN-202ENST00000376057 ADGRL1O94910 1474 aa16.27■□□□□ 0.19
PDPN-202ENST00000376057 PZPP20742 1482 aa16.26■□□□□ 0.19
PDPN-202ENST00000376057 CYB5RLQ6IPT4 315 aa16.26■□□□□ 0.19
PDPN-202ENST00000376057 KDM5CP41229 1560 aa16.25■□□□□ 0.19
PDPN-202ENST00000376057 DIP2BQ9P265 1576 aa16.25■□□□□ 0.19
PDPN-202ENST00000376057 MAGI2Q86UL8 1455 aa16.25■□□□□ 0.19
PDPN-202ENST00000376057 MPHOSPH9Q99550 1183 aa16.24■□□□□ 0.19
PDPN-202ENST00000376057 ZNF518AQ6AHZ1 1483 aa16.24■□□□□ 0.19
PDPN-202ENST00000376057 ATP7AQ04656 1500 aa16.23■□□□□ 0.19
PDPN-202ENST00000376057 EIF2AK4Q9P2K8 1649 aaKnown RBP16.23■□□□□ 0.19
PDPN-202ENST00000376057 SCAPERQ9BY12 1400 aa16.22■□□□□ 0.19
PDPN-202ENST00000376057 POGZQ7Z3K3 1410 aa16.21■□□□□ 0.18
PDPN-202ENST00000376057 IQGAP3Q86VI3 1631 aa16.2■□□□□ 0.18
PDPN-202ENST00000376057 MLH3Q9UHC1 1453 aa16.2■□□□□ 0.18
PDPN-202ENST00000376057 DEPDC5O75140 1603 aa16.2■□□□□ 0.18
PDPN-202ENST00000376057 ANKRD30BQ9BXX2 1392 aa16.19■□□□□ 0.18
PDPN-202ENST00000376057 SPAG9O60271 1321 aaKnown RBP16.19■□□□□ 0.18
PDPN-202ENST00000376057 BCORL1Q5H9F3 1711 aa16.19■□□□□ 0.18
PDPN-202ENST00000376057 TRIM52Q96A61 297 aa16.19■□□□□ 0.18
PDPN-202ENST00000376057 KIDINS220Q9ULH0 1771 aa16.18■□□□□ 0.18
PDPN-202ENST00000376057 PPRC1Q5VV67 1664 aaKnown RBP16.16■□□□□ 0.18
PDPN-202ENST00000376057 HECW2Q9P2P5 1572 aa16.16■□□□□ 0.18
PDPN-202ENST00000376057 RICTORQ6R327 1708 aa16.16■□□□□ 0.18
PDPN-202ENST00000376057 FAM135AQ9P2D6 1515 aa16.15■□□□□ 0.18
PDPN-202ENST00000376057 TEX14Q8IWB6 1497 aa16.15■□□□□ 0.18
PDPN-202ENST00000376057 RPRD2Q5VT52 1461 aaKnown RBP16.14■□□□□ 0.17
PDPN-202ENST00000376057 VWDEQ8N2E2 1590 aa16.14■□□□□ 0.17
PDPN-202ENST00000376057 AFAP1Q8N556 730 aa16.14■□□□□ 0.17
PDPN-202ENST00000376057 SLC4A1APQ9BWU0 796 aaKnown RBP16.14■□□□□ 0.17
PDPN-202ENST00000376057 NUP155O75694 1391 aa16.13■□□□□ 0.17
PDPN-202ENST00000376057 KIF13AQ9H1H9 1805 aa16.13■□□□□ 0.17
PDPN-202ENST00000376057 DHX29Q7Z478 1369 aaKnown RBP16.13■□□□□ 0.17
PDPN-202ENST00000376057 ZMYM4Q5VZL5 1548 aa16.13■□□□□ 0.17
PDPN-202ENST00000376057 SIN3AQ96ST3 1273 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms