RNA–Protein interactions for RNA: ENST00000375642.6

C6orf48-207, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-207ENST00000375642 MYO5CQ9NQX4 1742 aa27.38■■□□□ 1.97
C6orf48-207ENST00000375642 ARHGAP5Q13017 1502 aa27.36■■□□□ 1.97
C6orf48-207ENST00000375642 CFAP74Q9C0B2 1584 aa27.36■■□□□ 1.97
C6orf48-207ENST00000375642 LRRC9Q6ZRR7 1453 aa27.36■■□□□ 1.97
C6orf48-207ENST00000375642 CCNB3Q8WWL7 1395 aa27.35■■□□□ 1.97
C6orf48-207ENST00000375642 KANK4Q5T7N3 995 aaPredicted RBP27.35■■□□□ 1.97
C6orf48-207ENST00000375642 RAPGEF3O95398 923 aa27.34■■□□□ 1.97
C6orf48-207ENST00000375642 GPATCH8Q9UKJ3 1502 aaKnown RBP27.32■■□□□ 1.96
C6orf48-207ENST00000375642 FBXO41Q8TF61 875 aa27.31■■□□□ 1.96
C6orf48-207ENST00000375642 DENND4BO75064 1496 aaPredicted RBP27.31■■□□□ 1.96
C6orf48-207ENST00000375642 CFDP1Q9UEE9 299 aaPredicted RBP27.3■■□□□ 1.96
C6orf48-207ENST00000375642 SCAPERQ9BY12 1400 aa27.29■■□□□ 1.96
C6orf48-207ENST00000375642 PREX2Q70Z35 1606 aa27.29■■□□□ 1.96
C6orf48-207ENST00000375642 NCOA2Q15596 1464 aa27.28■■□□□ 1.96
C6orf48-207ENST00000375642 ZNF777Q9ULD5 760 aaPredicted RBP27.27■■□□□ 1.96
C6orf48-207ENST00000375642 CDC42BPBQ9Y5S2 1711 aa27.27■■□□□ 1.96
C6orf48-207ENST00000375642 CDC42BPAQ5VT25 1732 aa27.26■■□□□ 1.95
C6orf48-207ENST00000375642 SUPT6HQ7KZ85 1726 aaKnown RBP27.26■■□□□ 1.95
C6orf48-207ENST00000375642 POGZQ7Z3K3 1410 aa27.19■■□□□ 1.94
C6orf48-207ENST00000375642 FRMPD1Q5SYB0 1578 aa27.18■■□□□ 1.94
C6orf48-207ENST00000375642 AFAP1Q8N556 730 aa27.16■■□□□ 1.94
C6orf48-207ENST00000375642 PTPRMP28827 1452 aa27.16■■□□□ 1.94
C6orf48-207ENST00000375642 RICTORQ6R327 1708 aa27.16■■□□□ 1.94
C6orf48-207ENST00000375642 ITSN2Q9NZM3 1697 aa27.14■■□□□ 1.94
C6orf48-207ENST00000375642 ABCC1P33527 1531 aa27.14■■□□□ 1.94
C6orf48-207ENST00000375642 ZNF518AQ6AHZ1 1483 aa27.13■■□□□ 1.93
C6orf48-207ENST00000375642 PLEKHH2Q8IVE3 1493 aa27.13■■□□□ 1.93
C6orf48-207ENST00000375642 ARHGEF12Q9NZN5 1544 aa27.13■■□□□ 1.93
C6orf48-207ENST00000375642 HNRNPMP52272 730 aaKnown RBP eCLIP27.13■■□□□ 1.93
C6orf48-207ENST00000375642 SAMD9LQ8IVG5 1584 aa27.13■■□□□ 1.93
C6orf48-207ENST00000375642 ZNF644Q9H582 1327 aaPredicted RBP27.13■■□□□ 1.93
C6orf48-207ENST00000375642 KIAA1107Q9UPP5 1409 aa27.12■■□□□ 1.93
C6orf48-207ENST00000375642 ADAMTSL3P82987 1691 aa27.11■■□□□ 1.93
C6orf48-207ENST00000375642 TRAPPC8Q9Y2L5 1435 aa27.1■■□□□ 1.93
C6orf48-207ENST00000375642 ZMYM4Q5VZL5 1548 aa27.1■■□□□ 1.93
C6orf48-207ENST00000375642 MAGI2Q86UL8 1455 aa27.09■■□□□ 1.93
C6orf48-207ENST00000375642 MYOM3Q5VTT5 1437 aa27.08■■□□□ 1.93
C6orf48-207ENST00000375642 MYT1LQ9UL68 1186 aa27.08■■□□□ 1.93
C6orf48-207ENST00000375642 SYCP2Q9BX26 1530 aa27.06■■□□□ 1.92
C6orf48-207ENST00000375642 ARID4BQ4LE39 1312 aaPredicted RBP27.05■■□□□ 1.92
C6orf48-207ENST00000375642 MIA2Q96PC5 1412 aa27.04■■□□□ 1.92
C6orf48-207ENST00000375642 KDM5CP41229 1560 aa27.04■■□□□ 1.92
C6orf48-207ENST00000375642 ZFYVE16Q7Z3T8 1539 aa27.03■■□□□ 1.92
C6orf48-207ENST00000375642 YEATS2Q9ULM3 1422 aa27.03■■□□□ 1.92
C6orf48-207ENST00000375642 CAMSAP2Q08AD1 1489 aa27.01■■□□□ 1.91
C6orf48-207ENST00000375642 BCORL1Q5H9F3 1711 aa27.01■■□□□ 1.91
C6orf48-207ENST00000375642 MLH3Q9UHC1 1453 aa27■■□□□ 1.91
C6orf48-207ENST00000375642 SPAG9O60271 1321 aaKnown RBP27■■□□□ 1.91
C6orf48-207ENST00000375642 PPARGC1BQ86YN6 1023 aaKnown RBP27■■□□□ 1.91
C6orf48-207ENST00000375642 MADDQ8WXG6 1647 aa27■■□□□ 1.91
C6orf48-207ENST00000375642 ARHGEF40Q8TER5 1519 aa27■■□□□ 1.91
C6orf48-207ENST00000375642 MBD5Q9P267 1494 aa27■■□□□ 1.91
C6orf48-207ENST00000375642 RSPH4AQ5TD94 716 aa26.99■■□□□ 1.91
C6orf48-207ENST00000375642 LMTK3Q96Q04 1460 aa26.96■■□□□ 1.91
C6orf48-207ENST00000375642 ATP10AO60312 1499 aa26.95■■□□□ 1.91
C6orf48-207ENST00000375642 FGD6Q6ZV73 1430 aa26.94■■□□□ 1.9
C6orf48-207ENST00000375642 CCDC141Q6ZP82 1450 aa26.91■■□□□ 1.9
C6orf48-207ENST00000375642 TSPY4P0CV99 314 aa26.9■■□□□ 1.9
C6orf48-207ENST00000375642 TSPY10P0CW01 314 aa26.9■■□□□ 1.9
C6orf48-207ENST00000375642 C9orf84Q5VXU9 1444 aa26.9■■□□□ 1.9
C6orf48-207ENST00000375642 RIMS1Q86UR5 1692 aaKnown RBP26.89■■□□□ 1.9
C6orf48-207ENST00000375642 ARHGEF5Q12774 1597 aa26.87■■□□□ 1.89
C6orf48-207ENST00000375642 PTPN23Q9H3S7 1636 aa26.87■■□□□ 1.89
C6orf48-207ENST00000375642 ATP7AQ04656 1500 aa26.86■■□□□ 1.89
C6orf48-207ENST00000375642 DIP2CQ9Y2E4 1556 aa26.86■■□□□ 1.89
C6orf48-207ENST00000375642 KIDINS220Q9ULH0 1771 aa26.86■■□□□ 1.89
C6orf48-207ENST00000375642 RTEL1-TNFRSF6BF6WH68 1400 aa26.85■■□□□ 1.89
C6orf48-207ENST00000375642 ABCA6Q8N139 1617 aa26.84■■□□□ 1.89
C6orf48-207ENST00000375642 TCOF1Q13428 1488 aaKnown RBP26.84■■□□□ 1.89
C6orf48-207ENST00000375642 FAM50AQ14320 339 aaKnown RBP26.83■■□□□ 1.89
C6orf48-207ENST00000375642 INO80Q9ULG1 1556 aaPredicted RBP26.83■■□□□ 1.89
C6orf48-207ENST00000375642 PLPPR3Q6T4P5 718 aa26.81■■□□□ 1.88
C6orf48-207ENST00000375642 HSPA2P54652 639 aa26.8■■□□□ 1.88
C6orf48-207ENST00000375642 MLECQ14165 292 aa26.79■■□□□ 1.88
C6orf48-207ENST00000375642 REREQ9P2R6 1566 aa26.79■■□□□ 1.88
C6orf48-207ENST00000375642 ABCC5O15440 1437 aa26.76■■□□□ 1.87
C6orf48-207ENST00000375642 SIGLEC1Q9BZZ2 1709 aa26.76■■□□□ 1.87
C6orf48-207ENST00000375642 A2MP01023 1474 aa26.75■■□□□ 1.87
C6orf48-207ENST00000375642 DAPK1P53355 1430 aa26.74■■□□□ 1.87
C6orf48-207ENST00000375642 AGLP35573 1532 aa26.73■■□□□ 1.87
C6orf48-207ENST00000375642 CERKQ8TCT0 537 aa26.72■■□□□ 1.87
C6orf48-207ENST00000375642 DHX29Q7Z478 1369 aaKnown RBP26.71■■□□□ 1.87
C6orf48-207ENST00000375642 MAST1Q9Y2H9 1570 aa26.71■■□□□ 1.87
C6orf48-207ENST00000375642 SHANK2Q9UPX8 1470 aa26.7■■□□□ 1.87
C6orf48-207ENST00000375642 DNMT1P26358 1616 aaKnown RBP26.69■■□□□ 1.86
C6orf48-207ENST00000375642 CHIC2Q9UKJ5 165 aa26.68■■□□□ 1.86
C6orf48-207ENST00000375642 ADGBQ8N7X0 1667 aa26.68■■□□□ 1.86
C6orf48-207ENST00000375642 PLXNC1O60486 1568 aa26.67■■□□□ 1.86
C6orf48-207ENST00000375642 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.65■■□□□ 1.864e-7■□□□□ 10.4
C6orf48-207ENST00000375642 FER1L4A9Z1Z3 1794 aa26.64■■□□□ 1.86
C6orf48-207ENST00000375642 RRP7BPQ9NSQ0 103 aa26.64■■□□□ 1.86
C6orf48-207ENST00000375642 CROCC2H7BZ55 1655 aa26.63■■□□□ 1.85
C6orf48-207ENST00000375642 ANKRD30AQ9BXX3 1397 aa26.62■■□□□ 1.85
C6orf48-207ENST00000375642 KIF3BO15066 747 aa26.62■■□□□ 1.85
C6orf48-207ENST00000375642 ESF1Q9H501 851 aaKnown RBP26.62■■□□□ 1.85
C6orf48-207ENST00000375642 RRBP1Q9P2E9 1410 aaKnown RBP26.62■■□□□ 1.85
C6orf48-207ENST00000375642 KIF15Q9NS87 1388 aa26.61■■□□□ 1.85
C6orf48-207ENST00000375642 GGT6Q6P531 493 aa26.61■■□□□ 1.85
C6orf48-207ENST00000375642 ITGAEP38570 1179 aa26.6■■□□□ 1.85
C6orf48-207ENST00000375642 NCOA1Q15788 1441 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms