RNA–Protein interactions for RNA: ENST00000375618.8

C11orf88-202, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C11orf88, Length 712 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-202ENST00000375618 GPATCH8Q9UKJ3 1502 aaKnown RBP25.33■■□□□ 1.65
C11orf88-202ENST00000375618 EFCAB2Q5VUJ9 269 aa25.33■■□□□ 1.65
C11orf88-202ENST00000375618 DENND4BO75064 1496 aaPredicted RBP25.33■■□□□ 1.65
C11orf88-202ENST00000375618 ADGRL1O94910 1474 aa25.32■■□□□ 1.64
C11orf88-202ENST00000375618 RICTORQ6R327 1708 aa25.32■■□□□ 1.64
C11orf88-202ENST00000375618 SCAPERQ9BY12 1400 aa25.3■■□□□ 1.64
C11orf88-202ENST00000375618 KANK4Q5T7N3 995 aaPredicted RBP25.3■■□□□ 1.64
C11orf88-202ENST00000375618 MAP3K1Q13233 1512 aa25.3■■□□□ 1.64
C11orf88-202ENST00000375618 LRRC9Q6ZRR7 1453 aa25.29■■□□□ 1.64
C11orf88-202ENST00000375618 POGZQ7Z3K3 1410 aa25.26■■□□□ 1.63
C11orf88-202ENST00000375618 ARHGEF12Q9NZN5 1544 aa25.26■■□□□ 1.63
C11orf88-202ENST00000375618 CCNB3Q8WWL7 1395 aa25.25■■□□□ 1.63
C11orf88-202ENST00000375618 NCOA2Q15596 1464 aa25.25■■□□□ 1.63
C11orf88-202ENST00000375618 SAMD9LQ8IVG5 1584 aa25.23■■□□□ 1.63
C11orf88-202ENST00000375618 ABCC1P33527 1531 aa25.23■■□□□ 1.63
C11orf88-202ENST00000375618 SUPT6HQ7KZ85 1726 aaKnown RBP25.23■■□□□ 1.63
C11orf88-202ENST00000375618 ZMYM4Q5VZL5 1548 aa25.22■■□□□ 1.63
C11orf88-202ENST00000375618 TRAPPC8Q9Y2L5 1435 aa25.19■■□□□ 1.62
C11orf88-202ENST00000375618 ITSN2Q9NZM3 1697 aa25.18■■□□□ 1.62
C11orf88-202ENST00000375618 AFAP1Q8N556 730 aa25.18■■□□□ 1.62
C11orf88-202ENST00000375618 CFDP1Q9UEE9 299 aaPredicted RBP25.18■■□□□ 1.62
C11orf88-202ENST00000375618 ZNF777Q9ULD5 760 aaPredicted RBP25.18■■□□□ 1.62
C11orf88-202ENST00000375618 YEATS2Q9ULM3 1422 aa25.18■■□□□ 1.62
C11orf88-202ENST00000375618 ARHGEF40Q8TER5 1519 aa25.17■■□□□ 1.62
C11orf88-202ENST00000375618 KDM4FA0A1W2PPD8 638 aa25.16■■□□□ 1.62
C11orf88-202ENST00000375618 ZNF644Q9H582 1327 aaPredicted RBP25.15■■□□□ 1.62
C11orf88-202ENST00000375618 KDM5CP41229 1560 aa25.15■■□□□ 1.62
C11orf88-202ENST00000375618 SYCP2Q9BX26 1530 aa25.14■■□□□ 1.62
C11orf88-202ENST00000375618 ZNF518AQ6AHZ1 1483 aa25.14■■□□□ 1.61
C11orf88-202ENST00000375618 ZFYVE16Q7Z3T8 1539 aa25.12■■□□□ 1.61
C11orf88-202ENST00000375618 HNRNPMP52272 730 aaKnown RBP eCLIP25.11■■□□□ 1.61
C11orf88-202ENST00000375618 MAGI2Q86UL8 1455 aa25.1■■□□□ 1.61
C11orf88-202ENST00000375618 APLP2Q06481 763 aa25.1■■□□□ 1.61
C11orf88-202ENST00000375618 SIGLEC1Q9BZZ2 1709 aa25.09■■□□□ 1.61
C11orf88-202ENST00000375618 KIAA1107Q9UPP5 1409 aa25.09■■□□□ 1.61
C11orf88-202ENST00000375618 HECW2Q9P2P5 1572 aa25.06■■□□□ 1.6
C11orf88-202ENST00000375618 PLEKHH2Q8IVE3 1493 aa25.06■■□□□ 1.6
C11orf88-202ENST00000375618 MBD5Q9P267 1494 aa25.05■■□□□ 1.6
C11orf88-202ENST00000375618 CAMSAP2Q08AD1 1489 aa25.04■■□□□ 1.6
C11orf88-202ENST00000375618 MLH3Q9UHC1 1453 aa25.04■■□□□ 1.6
C11orf88-202ENST00000375618 MYOM3Q5VTT5 1437 aa25.03■■□□□ 1.6
C11orf88-202ENST00000375618 DIP2CQ9Y2E4 1556 aa25.02■■□□□ 1.6
C11orf88-202ENST00000375618 ABCA6Q8N139 1617 aa25.02■■□□□ 1.6
C11orf88-202ENST00000375618 KIDINS220Q9ULH0 1771 aa25.02■■□□□ 1.6
C11orf88-202ENST00000375618 ATP10AO60312 1499 aa25■■□□□ 1.59
C11orf88-202ENST00000375618 C9orf84Q5VXU9 1444 aa24.96■■□□□ 1.59
C11orf88-202ENST00000375618 INO80Q9ULG1 1556 aaPredicted RBP24.96■■□□□ 1.59
C11orf88-202ENST00000375618 MIA2Q96PC5 1412 aa24.95■■□□□ 1.59
C11orf88-202ENST00000375618 BCORL1Q5H9F3 1711 aa24.95■■□□□ 1.59
C11orf88-202ENST00000375618 SPAG9O60271 1321 aaKnown RBP24.95■■□□□ 1.58
C11orf88-202ENST00000375618 MYT1LQ9UL68 1186 aa24.95■■□□□ 1.58
C11orf88-202ENST00000375618 ARID4BQ4LE39 1312 aaPredicted RBP24.94■■□□□ 1.58
C11orf88-202ENST00000375618 ATP7AQ04656 1500 aa24.94■■□□□ 1.58
C11orf88-202ENST00000375618 ADAMTSL3P82987 1691 aa24.94■■□□□ 1.58
C11orf88-202ENST00000375618 AEBP2Q6ZN18 517 aaPredicted RBP24.93■■□□□ 1.58
C11orf88-202ENST00000375618 CCDC141Q6ZP82 1450 aa24.91■■□□□ 1.58
C11orf88-202ENST00000375618 PPARGC1BQ86YN6 1023 aaKnown RBP24.91■■□□□ 1.58
C11orf88-202ENST00000375618 ARHGEF5Q12774 1597 aa24.91■■□□□ 1.58
C11orf88-202ENST00000375618 REREQ9P2R6 1566 aa24.91■■□□□ 1.58
C11orf88-202ENST00000375618 FGD6Q6ZV73 1430 aa24.89■■□□□ 1.58
C11orf88-202ENST00000375618 PTPN23Q9H3S7 1636 aa24.88■■□□□ 1.57
C11orf88-202ENST00000375618 MADDQ8WXG6 1647 aa24.86■■□□□ 1.57
C11orf88-202ENST00000375618 TCOF1Q13428 1488 aaKnown RBP24.86■■□□□ 1.57
C11orf88-202ENST00000375618 MLECQ14165 292 aa24.85■■□□□ 1.57
C11orf88-202ENST00000375618 RTEL1-TNFRSF6BF6WH68 1400 aa24.84■■□□□ 1.57
C11orf88-202ENST00000375618 AGLP35573 1532 aa24.83■■□□□ 1.57
C11orf88-202ENST00000375618 PLXNC1O60486 1568 aa24.82■■□□□ 1.56
C11orf88-202ENST00000375618 RSPH4AQ5TD94 716 aa24.82■■□□□ 1.56
C11orf88-202ENST00000375618 A2MP01023 1474 aa24.81■■□□□ 1.56
C11orf88-202ENST00000375618 ABCC5O15440 1437 aa24.79■■□□□ 1.56
C11orf88-202ENST00000375618 ADGBQ8N7X0 1667 aa24.79■■□□□ 1.56
C11orf88-202ENST00000375618 PTPRMP28827 1452 aa24.78■■□□□ 1.56
C11orf88-202ENST00000375618 MAST1Q9Y2H9 1570 aa24.78■■□□□ 1.56
C11orf88-202ENST00000375618 RIMS1Q86UR5 1692 aaKnown RBP24.78■■□□□ 1.56
C11orf88-202ENST00000375618 DNMT1P26358 1616 aaKnown RBP24.75■■□□□ 1.55
C11orf88-202ENST00000375618 CROCC2H7BZ55 1655 aa24.75■■□□□ 1.55
C11orf88-202ENST00000375618 TSPY4P0CV99 314 aa24.74■■□□□ 1.55
C11orf88-202ENST00000375618 TSPY10P0CW01 314 aa24.74■■□□□ 1.55
C11orf88-202ENST00000375618 DAPK1P53355 1430 aa24.74■■□□□ 1.55
C11orf88-202ENST00000375618 FER1L4A9Z1Z3 1794 aa24.74■■□□□ 1.55
C11orf88-202ENST00000375618 DHX29Q7Z478 1369 aaKnown RBP24.71■■□□□ 1.55
C11orf88-202ENST00000375618 SHANK2Q9UPX8 1470 aa24.7■■□□□ 1.55
C11orf88-202ENST00000375618 FAM50AQ14320 339 aaKnown RBP24.69■■□□□ 1.54
C11orf88-202ENST00000375618 PTPRKQ15262 1439 aa24.63■■□□□ 1.53
C11orf88-202ENST00000375618 PLPPR3Q6T4P5 718 aa24.63■■□□□ 1.53
C11orf88-202ENST00000375618 CEBPAP49715 358 aaPredicted RBP24.62■■□□□ 1.53
C11orf88-202ENST00000375618 CHIC2Q9UKJ5 165 aa24.62■■□□□ 1.53
C11orf88-202ENST00000375618 GGT6Q6P531 493 aa24.61■■□□□ 1.53
C11orf88-202ENST00000375618 KIF15Q9NS87 1388 aa24.6■■□□□ 1.53
C11orf88-202ENST00000375618 KIF3BO15066 747 aa24.6■■□□□ 1.53
C11orf88-202ENST00000375618 RRP7BPQ9NSQ0 103 aa24.6■■□□□ 1.53
C11orf88-202ENST00000375618 DUOX2Q9NRD8 1548 aa24.58■■□□□ 1.53
C11orf88-202ENST00000375618 NCOA1Q15788 1441 aa24.57■■□□□ 1.52
C11orf88-202ENST00000375618 RRBP1Q9P2E9 1410 aaKnown RBP24.57■■□□□ 1.52
C11orf88-202ENST00000375618 ADGRL2O95490 1459 aa24.57■■□□□ 1.52
C11orf88-202ENST00000375618 C3P01024 1663 aa24.56■■□□□ 1.52
C11orf88-202ENST00000375618 CLTCQ00610 1675 aaKnown RBP24.56■■□□□ 1.52
C11orf88-202ENST00000375618 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.54■■□□□ 1.52
C11orf88-202ENST00000375618 CNTLNQ9NXG0 1405 aa24.54■■□□□ 1.52
C11orf88-202ENST00000375618 ANKRD30AQ9BXX3 1397 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms