RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 MTERF4Q7Z6M4 381 aaKnown RBP7.47□□□□□ -1.21
SCN2A-202ENST00000375427 FGD1P98174 961 aa7.47□□□□□ -1.21
SCN2A-202ENST00000375427 ACBD3Q9H3P7 528 aa7.47□□□□□ -1.21
SCN2A-202ENST00000375427 GOLGA6L10A0A0M3HER8 536 aa7.47□□□□□ -1.21
SCN2A-202ENST00000375427 GOLGA6L10A6NI86 522 aa7.47□□□□□ -1.21
SCN2A-202ENST00000375427 GOLGA6L19H0YKK7 550 aa7.47□□□□□ -1.21
SCN2A-202ENST00000375427 RUFY1Q96T51 708 aa7.46□□□□□ -1.21
SCN2A-202ENST00000375427 TMCO5BA8MYB1 307 aa7.46□□□□□ -1.22
SCN2A-202ENST00000375427 RALBP1Q15311 655 aa7.46□□□□□ -1.22
SCN2A-202ENST00000375427 SUDS3Q9H7L9 328 aaPredicted RBP7.46□□□□□ -1.22
SCN2A-202ENST00000375427 RSPH4AQ5TD94 716 aa7.46□□□□□ -1.22
SCN2A-202ENST00000375427 GBP4Q96PP9 640 aa7.45□□□□□ -1.22
SCN2A-202ENST00000375427 SHTN1A0MZ66 631 aa7.45□□□□□ -1.22
SCN2A-202ENST00000375427 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.45□□□□□ -1.22
SCN2A-202ENST00000375427 HNRNPUL2Q1KMD3 747 aaKnown RBP7.45□□□□□ -1.22
SCN2A-202ENST00000375427 NF2P35240 595 aa7.44□□□□□ -1.22
SCN2A-202ENST00000375427 SEPT10Q9P0V9 454 aa7.44□□□□□ -1.22
SCN2A-202ENST00000375427 HSP90B2PQ58FF3 399 aa7.44□□□□□ -1.22
SCN2A-202ENST00000375427 SEPT14Q6ZU15 432 aa7.43□□□□□ -1.22
SCN2A-202ENST00000375427 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.43□□□□□ -1.22
SCN2A-202ENST00000375427 OS9Q13438 667 aaPredicted RBP7.43□□□□□ -1.22
SCN2A-202ENST00000375427 TSR1Q2NL82 804 aaKnown RBP7.43□□□□□ -1.22
SCN2A-202ENST00000375427 GNL2Q13823 731 aaKnown RBP7.43□□□□□ -1.22
SCN2A-202ENST00000375427 MPHOSPH10O00566 681 aaKnown RBP7.42□□□□□ -1.22
SCN2A-202ENST00000375427 CCP110O43303 1012 aa7.42□□□□□ -1.22
SCN2A-202ENST00000375427 SEPT6Q14141 434 aa7.42□□□□□ -1.22
SCN2A-202ENST00000375427 MYO6Q9UM54 1294 aa7.42□□□□□ -1.22
SCN2A-202ENST00000375427 KIF20AO95235 890 aa7.41□□□□□ -1.22
SCN2A-202ENST00000375427 SHROOM4Q9ULL8 1493 aa7.41□□□□□ -1.22
SCN2A-202ENST00000375427 HSCBQ8IWL3 235 aa7.41□□□□□ -1.22
SCN2A-202ENST00000375427 FAM114A1Q8IWE2 563 aa7.4□□□□□ -1.22
SCN2A-202ENST00000375427 TRIM63Q969Q1 353 aa7.4□□□□□ -1.22
SCN2A-202ENST00000375427 DZIP1Q86YF9 867 aaKnown RBP7.4□□□□□ -1.23
SCN2A-202ENST00000375427 CCAR2Q8N163 923 aaKnown RBP7.4□□□□□ -1.23
SCN2A-202ENST00000375427 LEKR1Q6ZMV7 388 aa7.39□□□□□ -1.23
SCN2A-202ENST00000375427 SOGA3Q5TF21 947 aa7.39□□□□□ -1.23
SCN2A-202ENST00000375427 CFAP44Q96MT7 982 aa7.39□□□□□ -1.23
SCN2A-202ENST00000375427 SH3BGRP55822 239 aaPredicted RBP7.39□□□□□ -1.23
SCN2A-202ENST00000375427 CHMP4BQ9H444 224 aaKnown RBP7.38□□□□□ -1.23
SCN2A-202ENST00000375427 KIAA0754O94854 1291 aa7.38□□□□□ -1.23
SCN2A-202ENST00000375427 HNRNPUQ00839 825 aaKnown RBP eCLIP7.38□□□□□ -1.23
SCN2A-202ENST00000375427 PPM1EQ8WY54 764 aa7.38□□□□□ -1.23
SCN2A-202ENST00000375427 TPM1P09493 284 aa7.38□□□□□ -1.23
SCN2A-202ENST00000375427 FAM50AQ14320 339 aaKnown RBP7.38□□□□□ -1.23
SCN2A-202ENST00000375427 SWAP70Q9UH65 585 aa7.38□□□□□ -1.23
SCN2A-202ENST00000375427 KIF3AQ9Y496 699 aa7.38□□□□□ -1.23
SCN2A-202ENST00000375427 KCNJ4P48050 445 aa7.37□□□□□ -1.23
SCN2A-202ENST00000375427 MCCP23508 829 aa7.37□□□□□ -1.23
SCN2A-202ENST00000375427 FAM193AP78312 1265 aa7.37□□□□□ -1.23
SCN2A-202ENST00000375427 FEZ1Q99689 392 aa7.37□□□□□ -1.23
SCN2A-202ENST00000375427 NAP1L2Q9ULW6 460 aaPredicted RBP7.37□□□□□ -1.23
SCN2A-202ENST00000375427 CSPP1Q1MSJ5 1256 aa7.37□□□□□ -1.23
SCN2A-202ENST00000375427 EZRP15311 586 aaKnown RBP7.37□□□□□ -1.23
SCN2A-202ENST00000375427 PPARGC1BQ86YN6 1023 aaKnown RBP7.36□□□□□ -1.23
SCN2A-202ENST00000375427 GOLGA6L9A6NEM1 432 aa7.36□□□□□ -1.23
SCN2A-202ENST00000375427 TSPY4P0CV99 314 aa7.36□□□□□ -1.23
SCN2A-202ENST00000375427 TSPY10P0CW01 314 aa7.36□□□□□ -1.23
SCN2A-202ENST00000375427 ENOX2Q16206 610 aaKnown RBP7.36□□□□□ -1.23
SCN2A-202ENST00000375427 ZMAT2Q96NC0 199 aaKnown RBP7.36□□□□□ -1.23
SCN2A-202ENST00000375427 CHMP2AO43633 222 aa7.36□□□□□ -1.23
SCN2A-202ENST00000375427 DIAPH3Q9NSV4 1193 aa7.36□□□□□ -1.23
SCN2A-202ENST00000375427 IPO7O95373 1038 aaKnown RBP7.35□□□□□ -1.23
SCN2A-202ENST00000375427 WDR66Q8TBY9 1149 aa7.35□□□□□ -1.23
SCN2A-202ENST00000375427 DNAJC2Q99543 621 aaKnown RBP7.35□□□□□ -1.23
SCN2A-202ENST00000375427 CCDC173Q0VFZ6 552 aa7.35□□□□□ -1.23
SCN2A-202ENST00000375427 DDX23Q9BUQ8 820 aaKnown RBP7.35□□□□□ -1.23
SCN2A-202ENST00000375427 ERCC4Q92889 916 aaPredicted RBP7.35□□□□□ -1.23
SCN2A-202ENST00000375427 ANKRD18AQ8IVF6 992 aa7.34□□□□□ -1.23
SCN2A-202ENST00000375427 TAOK2Q9UL54 1235 aa7.34□□□□□ -1.23
SCN2A-202ENST00000375427 CEP63Q96MT8 703 aa7.34□□□□□ -1.23
SCN2A-202ENST00000375427 PPP4R2Q9NY27 417 aa7.34□□□□□ -1.23
SCN2A-202ENST00000375427 KIF3CO14782 793 aa7.34□□□□□ -1.23
SCN2A-202ENST00000375427 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.34□□□□□ -1.24
SCN2A-202ENST00000375427 TPM2P07951 284 aa7.33□□□□□ -1.24
SCN2A-202ENST00000375427 NAP1L1P55209 391 aaKnown RBP7.33□□□□□ -1.24
SCN2A-202ENST00000375427 EIF3JO75822 258 aaKnown RBP7.33□□□□□ -1.24
SCN2A-202ENST00000375427 RNF168Q8IYW5 571 aaPredicted RBP7.33□□□□□ -1.24
SCN2A-202ENST00000375427 TRIM52Q96A61 297 aa7.33□□□□□ -1.24
SCN2A-202ENST00000375427 TCERG1O14776 1098 aaKnown RBP7.33□□□□□ -1.24
SCN2A-202ENST00000375427 MFAP1P55081 439 aaKnown RBP7.33□□□□□ -1.24
SCN2A-202ENST00000375427 FAM13BQ9NYF5 915 aa7.33□□□□□ -1.24
SCN2A-202ENST00000375427 AKAP17AQ02040 695 aaKnown RBP7.32□□□□□ -1.24
SCN2A-202ENST00000375427 GOLGA2Q08379 1002 aa7.32□□□□□ -1.24
SCN2A-202ENST00000375427 ZWINTO95229 277 aa7.32□□□□□ -1.24
SCN2A-202ENST00000375427 MAP3K7CLP57077 242 aa7.32□□□□□ -1.24
SCN2A-202ENST00000375427 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.32□□□□□ -1.24
SCN2A-202ENST00000375427 GIGYF2Q6Y7W6 1299 aaKnown RBP7.32□□□□□ -1.24
SCN2A-202ENST00000375427 DAAM2Q86T65 1068 aa7.31□□□□□ -1.24
SCN2A-202ENST00000375427 STK31Q9BXU1 1019 aa7.31□□□□□ -1.24
SCN2A-202ENST00000375427 DDX11Q96FC9 970 aa7.31□□□□□ -1.24
SCN2A-202ENST00000375427 SEPT8Q92599 483 aa7.31□□□□□ -1.24
SCN2A-202ENST00000375427 KIF16BQ96L93 1317 aa7.31□□□□□ -1.24
SCN2A-202ENST00000375427 DNAI2Q9GZS0 605 aa7.31□□□□□ -1.24
SCN2A-202ENST00000375427 PRKCSHP14314 528 aaPredicted RBP7.31□□□□□ -1.24
SCN2A-202ENST00000375427 ITPRIPQ8IWB1 547 aa7.31□□□□□ -1.24
SCN2A-202ENST00000375427 GTPBP4Q9BZE4 634 aaKnown RBP7.3□□□□□ -1.24
SCN2A-202ENST00000375427 FAM184BQ9ULE4 1060 aa7.3□□□□□ -1.24
SCN2A-202ENST00000375427 TIMELESSQ9UNS1 1208 aa7.3□□□□□ -1.24
SCN2A-202ENST00000375427 FTSJ3Q8IY81 847 aaKnown RBP7.3□□□□□ -1.24
SCN2A-202ENST00000375427 TMC1Q8TDI8 760 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms