RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 PRKRIP1Q9H875 184 aaPredicted RBP14.79□□□□□ -0.04
PTCH1-203ENST00000375274 ROCK2O75116 1388 aaKnown RBP14.79□□□□□ -0.04
PTCH1-203ENST00000375274 POGKQ9P215 609 aa14.79□□□□□ -0.04
PTCH1-203ENST00000375274 HSCBQ8IWL3 235 aa14.78□□□□□ -0.04
PTCH1-203ENST00000375274 MORC1Q86VD1 984 aa14.78□□□□□ -0.04
PTCH1-203ENST00000375274 L1TD1Q5T7N2 865 aaKnown RBP14.78□□□□□ -0.04
PTCH1-203ENST00000375274 PDE3BQ13370 1112 aa14.77□□□□□ -0.04
PTCH1-203ENST00000375274 DNTTIP2Q5QJE6 756 aaKnown RBP14.77□□□□□ -0.04
PTCH1-203ENST00000375274 ANKRD30AQ9BXX3 1397 aa14.75□□□□□ -0.05
PTCH1-203ENST00000375274 SPRYD3Q8NCJ5 442 aa14.75□□□□□ -0.05
PTCH1-203ENST00000375274 PNNQ9H307 717 aaKnown RBP14.74□□□□□ -0.05
PTCH1-203ENST00000375274 C14orf37Q86TY3 774 aa14.74□□□□□ -0.05
PTCH1-203ENST00000375274 SLKQ9H2G2 1235 aaPredicted RBP14.74□□□□□ -0.05
PTCH1-203ENST00000375274 ZBED9Q6R2W3 1325 aa14.73□□□□□ -0.05
PTCH1-203ENST00000375274 TPRNQ4KMQ1 711 aa14.73□□□□□ -0.05
PTCH1-203ENST00000375274 GOLGA2Q08379 1002 aa14.72□□□□□ -0.05
PTCH1-203ENST00000375274 FANCIQ9NVI1 1328 aa14.71□□□□□ -0.05
PTCH1-203ENST00000375274 KANK1Q14678 1352 aa14.71□□□□□ -0.05
PTCH1-203ENST00000375274 ZBTB7CA1YPR0 619 aa14.71□□□□□ -0.05
PTCH1-203ENST00000375274 PLEKHG5O94827 1062 aa14.7□□□□□ -0.06
PTCH1-203ENST00000375274 SMARCA4P51532 1647 aa14.69□□□□□ -0.06
PTCH1-203ENST00000375274 ATAD2BQ9ULI0 1458 aa14.69□□□□□ -0.06
PTCH1-203ENST00000375274 ST20-MTHFSA0A0A6YYL1 179 aa14.69□□□□□ -0.06
PTCH1-203ENST00000375274 RWDD1Q9H446 243 aaPredicted RBP14.69□□□□□ -0.06
PTCH1-203ENST00000375274 SRPK2P78362 688 aaKnown RBP14.69□□□□□ -0.06
PTCH1-203ENST00000375274 PLCB2Q00722 1185 aa14.68□□□□□ -0.06
PTCH1-203ENST00000375274 CADPSQ9ULU8 1353 aa14.68□□□□□ -0.06
PTCH1-203ENST00000375274 U2AF1L5P0DN76 240 aaPredicted RBP14.67□□□□□ -0.06
PTCH1-203ENST00000375274 U2AF1Q01081 240 aaKnown RBP eCLIP14.67□□□□□ -0.06
PTCH1-203ENST00000375274 KIF15Q9NS87 1388 aa14.67□□□□□ -0.06
PTCH1-203ENST00000375274 MYBBP1AQ9BQG0 1328 aaKnown RBP14.67□□□□□ -0.06
PTCH1-203ENST00000375274 IPO8O15397 1037 aaKnown RBP14.67□□□□□ -0.06
PTCH1-203ENST00000375274 CARMIL2Q6F5E8 1435 aa14.67□□□□□ -0.06
PTCH1-203ENST00000375274 SAFB2Q14151 953 aaKnown RBP eCLIP14.67□□□□□ -0.06
PTCH1-203ENST00000375274 CCDC18Q5T9S5 1454 aa14.66□□□□□ -0.06
PTCH1-203ENST00000375274 PDE4AP27815 886 aa14.66□□□□□ -0.06
PTCH1-203ENST00000375274 ZRSR1Q15695 479 aaKnown RBP14.66□□□□□ -0.06
PTCH1-203ENST00000375274 USP35Q9P2H5 1018 aa14.66□□□□□ -0.06
PTCH1-203ENST00000375274 GZF1Q9H116 711 aaPredicted RBP14.66□□□□□ -0.06
PTCH1-203ENST00000375274 ERCC6Q03468 1493 aa14.65□□□□□ -0.06
PTCH1-203ENST00000375274 PHLDB1Q86UU1 1377 aa14.65□□□□□ -0.06
PTCH1-203ENST00000375274 PMFBP1Q8TBY8 1022 aa14.64□□□□□ -0.07
PTCH1-203ENST00000375274 EXOC6Q8TAG9 804 aa14.64□□□□□ -0.07
PTCH1-203ENST00000375274 MSNP26038 577 aaKnown RBP14.64□□□□□ -0.07
PTCH1-203ENST00000375274 ARID4BQ4LE39 1312 aaPredicted RBP14.63□□□□□ -0.07
PTCH1-203ENST00000375274 PDS5BQ9NTI5 1447 aa14.63□□□□□ -0.07
PTCH1-203ENST00000375274 RRP1P56182 461 aaKnown RBP14.63□□□□□ -0.07
PTCH1-203ENST00000375274 CFAP44Q96MT7 982 aa14.63□□□□□ -0.07
PTCH1-203ENST00000375274 GBP4Q96PP9 640 aa14.63□□□□□ -0.07
PTCH1-203ENST00000375274 HAP1P54257 671 aaPredicted RBP14.63□□□□□ -0.07
PTCH1-203ENST00000375274 HNRNPMP52272 730 aaKnown RBP eCLIP14.62□□□□□ -0.07
PTCH1-203ENST00000375274 ITPRIPQ8IWB1 547 aa14.62□□□□□ -0.07
PTCH1-203ENST00000375274 CCDC146Q8IYE0 955 aa14.62□□□□□ -0.07
PTCH1-203ENST00000375274 CLUAP1Q96AJ1 413 aa14.62□□□□□ -0.07
PTCH1-203ENST00000375274 PLIN1O60240 522 aa14.61□□□□□ -0.07
PTCH1-203ENST00000375274 EFCAB2Q5VUJ9 269 aa14.61□□□□□ -0.07
PTCH1-203ENST00000375274 USP47Q96K76 1375 aa14.61□□□□□ -0.07
PTCH1-203ENST00000375274 GGT6Q6P531 493 aa14.6□□□□□ -0.07
PTCH1-203ENST00000375274 CENPJQ9HC77 1338 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-203ENST00000375274 KIF21BO75037 1637 aa14.6□□□□□ -0.07
PTCH1-203ENST00000375274 PANK3Q9H999 370 aa14.59□□□□□ -0.07
PTCH1-203ENST00000375274 KCNJ4P48050 445 aa14.59□□□□□ -0.07
PTCH1-203ENST00000375274 MFAP1P55081 439 aaKnown RBP14.59□□□□□ -0.07
PTCH1-203ENST00000375274 OS9Q13438 667 aaPredicted RBP14.59□□□□□ -0.07
PTCH1-203ENST00000375274 RSPH4AQ5TD94 716 aa14.59□□□□□ -0.07
PTCH1-203ENST00000375274 CENPQQ7L2Z9 268 aaPredicted RBP14.59□□□□□ -0.07
PTCH1-203ENST00000375274 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.59□□□□□ -0.07
PTCH1-203ENST00000375274 STK26Q9P289 416 aa14.58□□□□□ -0.08
PTCH1-203ENST00000375274 SMC4Q9NTJ3 1288 aa14.58□□□□□ -0.08
PTCH1-203ENST00000375274 IGF1RP08069 1367 aa14.58□□□□□ -0.08
PTCH1-203ENST00000375274 MCCP23508 829 aa14.58□□□□□ -0.08
PTCH1-203ENST00000375274 FAM161AQ3B820 660 aa14.57□□□□□ -0.08
PTCH1-203ENST00000375274 GOLGA6L3A6NEY3 463 aa14.57□□□□□ -0.08
PTCH1-203ENST00000375274 APBB1O00213 710 aa14.57□□□□□ -0.08
PTCH1-203ENST00000375274 EIF3AQ14152 1382 aaKnown RBP14.57□□□□□ -0.08
PTCH1-203ENST00000375274 SLC4A3P48751 1232 aa14.56□□□□□ -0.08
PTCH1-203ENST00000375274 HDGFL2Q7Z4V5 671 aaPredicted RBP14.56□□□□□ -0.08
PTCH1-203ENST00000375274 PTMSP20962 102 aa14.56□□□□□ -0.08
PTCH1-203ENST00000375274 FGD1P98174 961 aa14.56□□□□□ -0.08
PTCH1-203ENST00000375274 CRBNQ96SW2 442 aa14.56□□□□□ -0.08
PTCH1-203ENST00000375274 BICRAQ9NZM4 1560 aa14.55□□□□□ -0.08
PTCH1-203ENST00000375274 CCDC7Q96M83 1385 aa14.55□□□□□ -0.08
PTCH1-203ENST00000375274 GOLGA6L4A6NEF3 574 aa14.55□□□□□ -0.08
PTCH1-203ENST00000375274 CALD1Q05682 793 aaKnown RBP14.55□□□□□ -0.08
PTCH1-203ENST00000375274 UACAQ9BZF9 1416 aa14.55□□□□□ -0.08
PTCH1-203ENST00000375274 SOX12O15370 315 aa14.54□□□□□ -0.08
PTCH1-203ENST00000375274 FGD6Q6ZV73 1430 aa14.54□□□□□ -0.08
PTCH1-203ENST00000375274 KIF7Q2M1P5 1343 aa14.54□□□□□ -0.08
PTCH1-203ENST00000375274 GSE1Q14687 1217 aa14.53□□□□□ -0.08
PTCH1-203ENST00000375274 CCDC144AA2RUR9 1427 aa14.53□□□□□ -0.08
PTCH1-203ENST00000375274 KIF3BO15066 747 aa14.53□□□□□ -0.08
PTCH1-203ENST00000375274 A0A0G2JS52 829 aa14.53□□□□□ -0.08
PTCH1-203ENST00000375274 WASHC2AQ641Q2 1341 aa14.52□□□□□ -0.09
PTCH1-203ENST00000375274 CHAF1AQ13111 956 aaPredicted RBP14.51□□□□□ -0.09
PTCH1-203ENST00000375274 LRRC9Q6ZRR7 1453 aa14.51□□□□□ -0.09
PTCH1-203ENST00000375274 RTF1Q92541 710 aaKnown RBP14.5□□□□□ -0.09
PTCH1-203ENST00000375274 JPH4Q96JJ6 628 aa14.5□□□□□ -0.09
PTCH1-203ENST00000375274 CNTLNQ9NXG0 1405 aa14.5□□□□□ -0.09
PTCH1-203ENST00000375274 CGNL1Q0VF96 1302 aa14.5□□□□□ -0.09
PTCH1-203ENST00000375274 LMOD2Q6P5Q4 547 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms