RNA–Protein interactions for RNA: ENST00000375128.4

XPA-201, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XPA, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-201ENST00000375128 ARAP3Q8WWN8 1544 aa33.89■■■■□ 3.02
XPA-201ENST00000375128 GPATCH8Q9UKJ3 1502 aaKnown RBP33.89■■■■□ 3.02
XPA-201ENST00000375128 KDM6BO15054 1643 aa33.89■■■■□ 3.02
XPA-201ENST00000375128 CFAP74Q9C0B2 1584 aa33.88■■■■□ 3.01
XPA-201ENST00000375128 PHLDB1Q86UU1 1377 aa33.86■■■■□ 3.01
XPA-201ENST00000375128 AKNAQ7Z591 1439 aa33.86■■■■□ 3.01
XPA-201ENST00000375128 PPARGC1BQ86YN6 1023 aaKnown RBP33.83■■■■□ 3.01
XPA-201ENST00000375128 CFDP1Q9UEE9 299 aaPredicted RBP33.83■■■■□ 3.01
XPA-201ENST00000375128 ITSN2Q9NZM3 1697 aa33.83■■■■□ 3.01
XPA-201ENST00000375128 ZNF777Q9ULD5 760 aaPredicted RBP33.82■■■■□ 3
XPA-201ENST00000375128 COL17A1Q9UMD9 1497 aaPredicted RBP33.8■■■■□ 3
XPA-201ENST00000375128 ADGRL1O94910 1474 aa33.77■■■■□ 3
XPA-201ENST00000375128 SCAPERQ9BY12 1400 aa33.73■■■□□ 2.99
XPA-201ENST00000375128 RAPGEF3O95398 923 aa33.7■■■□□ 2.99
XPA-201ENST00000375128 DENND4BO75064 1496 aaPredicted RBP33.7■■■□□ 2.99
XPA-201ENST00000375128 MYOM3Q5VTT5 1437 aa33.7■■■□□ 2.98
XPA-201ENST00000375128 SAMD9LQ8IVG5 1584 aa33.69■■■□□ 2.98
XPA-201ENST00000375128 ZNF644Q9H582 1327 aaPredicted RBP33.66■■■□□ 2.98
XPA-201ENST00000375128 ABCC1P33527 1531 aa33.66■■■□□ 2.98
XPA-201ENST00000375128 RICTORQ6R327 1708 aa33.62■■■□□ 2.97
XPA-201ENST00000375128 PLEKHH2Q8IVE3 1493 aa33.61■■■□□ 2.97
XPA-201ENST00000375128 ARHGEF12Q9NZN5 1544 aa33.61■■■□□ 2.97
XPA-201ENST00000375128 MIA2Q96PC5 1412 aa33.61■■■□□ 2.97
XPA-201ENST00000375128 HNRNPMP52272 730 aaKnown RBP eCLIP33.61■■■□□ 2.97
XPA-201ENST00000375128 SYCP2Q9BX26 1530 aa33.6■■■□□ 2.97
XPA-201ENST00000375128 FRMPD1Q5SYB0 1578 aa33.59■■■□□ 2.97
XPA-201ENST00000375128 POGZQ7Z3K3 1410 aa33.59■■■□□ 2.97
XPA-201ENST00000375128 CAMSAP2Q08AD1 1489 aa33.59■■■□□ 2.97
XPA-201ENST00000375128 AFAP1Q8N556 730 aa33.57■■■□□ 2.96
XPA-201ENST00000375128 KIAA1107Q9UPP5 1409 aa33.57■■■□□ 2.96
XPA-201ENST00000375128 TRAPPC8Q9Y2L5 1435 aa33.55■■■□□ 2.96
XPA-201ENST00000375128 FGD6Q6ZV73 1430 aa33.54■■■□□ 2.96
XPA-201ENST00000375128 ZNF518AQ6AHZ1 1483 aa33.54■■■□□ 2.96
XPA-201ENST00000375128 PTPN23Q9H3S7 1636 aa33.51■■■□□ 2.96
XPA-201ENST00000375128 MYT1LQ9UL68 1186 aa33.51■■■□□ 2.95
XPA-201ENST00000375128 MBD5Q9P267 1494 aa33.47■■■□□ 2.95
XPA-201ENST00000375128 ZMYM4Q5VZL5 1548 aa33.46■■■□□ 2.95
XPA-201ENST00000375128 KDM5CP41229 1560 aa33.46■■■□□ 2.95
XPA-201ENST00000375128 FAM50AQ14320 339 aaKnown RBP33.44■■■□□ 2.94
XPA-201ENST00000375128 RSPH4AQ5TD94 716 aa33.43■■■□□ 2.94
XPA-201ENST00000375128 TCOF1Q13428 1488 aaKnown RBP33.43■■■□□ 2.94
XPA-201ENST00000375128 MAGI2Q86UL8 1455 aa33.4■■■□□ 2.94
XPA-201ENST00000375128 HECW2Q9P2P5 1572 aa33.4■■■□□ 2.94
XPA-201ENST00000375128 SPAG9O60271 1321 aaKnown RBP33.4■■■□□ 2.94
XPA-201ENST00000375128 CCDC141Q6ZP82 1450 aa33.4■■■□□ 2.94
XPA-201ENST00000375128 ZFYVE16Q7Z3T8 1539 aa33.39■■■□□ 2.94
XPA-201ENST00000375128 ARHGEF5Q12774 1597 aa33.39■■■□□ 2.94
XPA-201ENST00000375128 YEATS2Q9ULM3 1422 aa33.37■■■□□ 2.93
XPA-201ENST00000375128 MLH3Q9UHC1 1453 aa33.37■■■□□ 2.93
XPA-201ENST00000375128 TSPY4P0CV99 314 aa33.35■■■□□ 2.93
XPA-201ENST00000375128 TSPY10P0CW01 314 aa33.35■■■□□ 2.93
XPA-201ENST00000375128 ARHGEF40Q8TER5 1519 aa33.33■■■□□ 2.93
XPA-201ENST00000375128 KIDINS220Q9ULH0 1771 aa33.32■■■□□ 2.93
XPA-201ENST00000375128 ATP7AQ04656 1500 aa33.3■■■□□ 2.92
XPA-201ENST00000375128 INO80Q9ULG1 1556 aaPredicted RBP33.28■■■□□ 2.92
XPA-201ENST00000375128 DNMT1P26358 1616 aaKnown RBP33.28■■■□□ 2.92
XPA-201ENST00000375128 ABCC5O15440 1437 aa33.27■■■□□ 2.92
XPA-201ENST00000375128 DAPK1P53355 1430 aa33.27■■■□□ 2.92
XPA-201ENST00000375128 RRBP1Q9P2E9 1410 aaKnown RBP33.26■■■□□ 2.92
XPA-201ENST00000375128 ABCA6Q8N139 1617 aa33.26■■■□□ 2.92
XPA-201ENST00000375128 ATP10AO60312 1499 aa33.25■■■□□ 2.91
XPA-201ENST00000375128 RTEL1-TNFRSF6BF6WH68 1400 aa33.25■■■□□ 2.91
XPA-201ENST00000375128 DIP2CQ9Y2E4 1556 aa33.25■■■□□ 2.91
XPA-201ENST00000375128 CROCC2H7BZ55 1655 aa33.23■■■□□ 2.91
XPA-201ENST00000375128 C9orf84Q5VXU9 1444 aa33.22■■■□□ 2.91
XPA-201ENST00000375128 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.2■■■□□ 2.91
XPA-201ENST00000375128 MAST1Q9Y2H9 1570 aa33.2■■■□□ 2.91
XPA-201ENST00000375128 ARID4BQ4LE39 1312 aaPredicted RBP33.2■■■□□ 2.91
XPA-201ENST00000375128 ITGAEP38570 1179 aa33.19■■■□□ 2.9
XPA-201ENST00000375128 CHIC2Q9UKJ5 165 aa33.19■■■□□ 2.9
XPA-201ENST00000375128 SHANK2Q9UPX8 1470 aa33.17■■■□□ 2.9
XPA-201ENST00000375128 ADGBQ8N7X0 1667 aa33.14■■■□□ 2.9
XPA-201ENST00000375128 SIGLEC1Q9BZZ2 1709 aa33.12■■■□□ 2.89
XPA-201ENST00000375128 A2MP01023 1474 aa33.11■■■□□ 2.89
XPA-201ENST00000375128 REREQ9P2R6 1566 aa33.1■■■□□ 2.89
XPA-201ENST00000375128 PTPRKQ15262 1439 aa33.08■■■□□ 2.89
XPA-201ENST00000375128 PLXNC1O60486 1568 aa33.07■■■□□ 2.88
XPA-201ENST00000375128 ANKRD30AQ9BXX3 1397 aa33.07■■■□□ 2.88
XPA-201ENST00000375128 RRP7BPQ9NSQ0 103 aa33.07■■■□□ 2.88
XPA-201ENST00000375128 MLECQ14165 292 aa33.05■■■□□ 2.88
XPA-201ENST00000375128 DHX29Q7Z478 1369 aaKnown RBP33.05■■■□□ 2.88
XPA-201ENST00000375128 KIF15Q9NS87 1388 aa33.02■■■□□ 2.88
XPA-201ENST00000375128 NCOA1Q15788 1441 aa33.01■■■□□ 2.88
XPA-201ENST00000375128 ADGRL2O95490 1459 aa33.01■■■□□ 2.87
XPA-201ENST00000375128 AGLP35573 1532 aa33■■■□□ 2.87
XPA-201ENST00000375128 BCORL1Q5H9F3 1711 aa32.99■■■□□ 2.87
XPA-201ENST00000375128 DUOX2Q9NRD8 1548 aa32.97■■■□□ 2.87
XPA-201ENST00000375128 KIF3BO15066 747 aa32.94■■■□□ 2.86
XPA-201ENST00000375128 ROCK1Q13464 1354 aa32.94■■■□□ 2.86
XPA-201ENST00000375128 KDM4FA0A1W2PPD8 638 aa32.94■■■□□ 2.86
XPA-201ENST00000375128 GGT6Q6P531 493 aa32.92■■■□□ 2.86
XPA-201ENST00000375128 ADAMTSL3P82987 1691 aa32.89■■■□□ 2.86
XPA-201ENST00000375128 ERBINQ96RT1 1412 aa32.88■■■□□ 2.85
XPA-201ENST00000375128 EIF2AK4Q9P2K8 1649 aaKnown RBP32.86■■■□□ 2.85
XPA-201ENST00000375128 MADDQ8WXG6 1647 aa32.85■■■□□ 2.85
XPA-201ENST00000375128 ANKRD50Q9ULJ7 1429 aa32.83■■■□□ 2.85
XPA-201ENST00000375128 FER1L4A9Z1Z3 1794 aa32.83■■■□□ 2.85
XPA-201ENST00000375128 ESF1Q9H501 851 aaKnown RBP32.83■■■□□ 2.85
XPA-201ENST00000375128 RIMS1Q86UR5 1692 aaKnown RBP32.79■■■□□ 2.84
XPA-201ENST00000375128 RNF17Q9BXT8 1623 aaKnown RBP32.76■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms