RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 RAPGEF6Q8TEU7 1601 aa15.8■□□□□ 0.12
PTPN20-204ENST00000374346 ARID3CA6NKF2 412 aa15.8■□□□□ 0.12
PTPN20-204ENST00000374346 RPRD2Q5VT52 1461 aaKnown RBP15.8■□□□□ 0.12
PTPN20-204ENST00000374346 ANKRD30BQ9BXX2 1392 aa15.78■□□□□ 0.12
PTPN20-204ENST00000374346 ABCC5O15440 1437 aa15.78■□□□□ 0.12
PTPN20-204ENST00000374346 DISP1Q96F81 1524 aa15.78■□□□□ 0.12
PTPN20-204ENST00000374346 NUP153P49790 1475 aaKnown RBP15.77■□□□□ 0.12
PTPN20-204ENST00000374346 NCOA1Q15788 1441 aa15.76■□□□□ 0.11
PTPN20-204ENST00000374346 ITSN2Q9NZM3 1697 aa15.76■□□□□ 0.11
PTPN20-204ENST00000374346 SLC4A1APQ9BWU0 796 aaKnown RBP15.76■□□□□ 0.11
PTPN20-204ENST00000374346 POLR1AO95602 1720 aaPredicted RBP15.76■□□□□ 0.11
PTPN20-204ENST00000374346 CCDC7Q96M83 1385 aa15.75■□□□□ 0.11
PTPN20-204ENST00000374346 ZNF608Q9ULD9 1512 aaPredicted RBP15.75■□□□□ 0.11
PTPN20-204ENST00000374346 GRIN2AQ12879 1464 aa15.75■□□□□ 0.11
PTPN20-204ENST00000374346 FOXD1Q16676 465 aa15.74■□□□□ 0.11
PTPN20-204ENST00000374346 TEX14Q8IWB6 1497 aa15.73■□□□□ 0.11
PTPN20-204ENST00000374346 ADGBQ8N7X0 1667 aa15.73■□□□□ 0.11
PTPN20-204ENST00000374346 ERICH6BQ5W0A0 696 aa15.73■□□□□ 0.11
PTPN20-204ENST00000374346 ANP32EQ9BTT0 268 aa15.73■□□□□ 0.11
PTPN20-204ENST00000374346 TROQ12816 1431 aaPredicted RBP15.72■□□□□ 0.11
PTPN20-204ENST00000374346 PRKRIP1Q9H875 184 aaPredicted RBP15.71■□□□□ 0.1
PTPN20-204ENST00000374346 CFDP1Q9UEE9 299 aaPredicted RBP15.71■□□□□ 0.1
PTPN20-204ENST00000374346 EIF4G3O43432 1585 aaKnown RBP15.71■□□□□ 0.1
PTPN20-204ENST00000374346 CAMSAP2Q08AD1 1489 aa15.7■□□□□ 0.1
PTPN20-204ENST00000374346 ZNF644Q9H582 1327 aaPredicted RBP15.69■□□□□ 0.1
PTPN20-204ENST00000374346 RBM19Q9Y4C8 960 aaKnown RBP15.69■□□□□ 0.1
PTPN20-204ENST00000374346 MAGI1Q96QZ7 1491 aaPredicted RBP15.68■□□□□ 0.1
PTPN20-204ENST00000374346 ADCY10Q96PN6 1610 aa15.68■□□□□ 0.1
PTPN20-204ENST00000374346 NBPF8Q3BBV2 869 aa15.67■□□□□ 0.1
PTPN20-204ENST00000374346 MRS2Q9HD23 443 aa15.67■□□□□ 0.1
PTPN20-204ENST00000374346 SPATA31E1Q6ZUB1 1445 aa15.67■□□□□ 0.1
PTPN20-204ENST00000374346 CARMIL2Q6F5E8 1435 aa15.66■□□□□ 0.1
PTPN20-204ENST00000374346 CROCC2H7BZ55 1655 aa15.66■□□□□ 0.1
PTPN20-204ENST00000374346 PRG4Q92954 1404 aaPredicted RBP15.66■□□□□ 0.1
PTPN20-204ENST00000374346 ADGRL2O95490 1459 aa15.66■□□□□ 0.1
PTPN20-204ENST00000374346 C11orf95C9JLR9 678 aaPredicted RBP15.66■□□□□ 0.1
PTPN20-204ENST00000374346 CHMP7Q8WUX9 453 aaPredicted RBP15.65■□□□□ 0.1
PTPN20-204ENST00000374346 KIF7Q2M1P5 1343 aa15.65■□□□□ 0.1
PTPN20-204ENST00000374346 ANKRD30AQ9BXX3 1397 aa15.65■□□□□ 0.1
PTPN20-204ENST00000374346 PZPP20742 1482 aa15.65■□□□□ 0.1
PTPN20-204ENST00000374346 GPATCH8Q9UKJ3 1502 aaKnown RBP15.65■□□□□ 0.1
PTPN20-204ENST00000374346 ZBED9Q6R2W3 1325 aa15.64■□□□□ 0.1
PTPN20-204ENST00000374346 KIAA1107Q9UPP5 1409 aa15.64■□□□□ 0.09
PTPN20-204ENST00000374346 FAM9BQ8IZU0 186 aa15.63■□□□□ 0.09
PTPN20-204ENST00000374346 SYNJ2O15056 1496 aa15.63■□□□□ 0.09
PTPN20-204ENST00000374346 ZNF777Q9ULD5 760 aaPredicted RBP15.61■□□□□ 0.09
PTPN20-204ENST00000374346 PLB1Q6P1J6 1458 aa15.61■□□□□ 0.09
PTPN20-204ENST00000374346 ARID4BQ4LE39 1312 aaPredicted RBP15.61■□□□□ 0.09
PTPN20-204ENST00000374346 KIF14Q15058 1648 aa15.61■□□□□ 0.09
PTPN20-204ENST00000374346 CEP170Q5SW79 1584 aa15.61■□□□□ 0.09
PTPN20-204ENST00000374346 PPP4R2Q9NY27 417 aa15.6■□□□□ 0.09
PTPN20-204ENST00000374346 MBD5Q9P267 1494 aa15.6■□□□□ 0.09
PTPN20-204ENST00000374346 CCDC184Q52MB2 194 aa15.59■□□□□ 0.09
PTPN20-204ENST00000374346 ERCC6Q03468 1493 aa15.59■□□□□ 0.09
PTPN20-204ENST00000374346 ANKRD50Q9ULJ7 1429 aa15.58■□□□□ 0.09
PTPN20-204ENST00000374346 PLEKHD1A6NEE1 506 aa15.58■□□□□ 0.08
PTPN20-204ENST00000374346 IRX6P78412 446 aaPredicted RBP15.58■□□□□ 0.08
PTPN20-204ENST00000374346 USP47Q96K76 1375 aa15.58■□□□□ 0.08
PTPN20-204ENST00000374346 PKD2Q13563 968 aa15.57■□□□□ 0.08
PTPN20-204ENST00000374346 SHANK2Q9UPX8 1470 aa15.57■□□□□ 0.08
PTPN20-204ENST00000374346 ROCK2O75116 1388 aaKnown RBP15.56■□□□□ 0.08
PTPN20-204ENST00000374346 JPH4Q96JJ6 628 aa15.56■□□□□ 0.08
PTPN20-204ENST00000374346 FBLN2P98095 1184 aa15.55■□□□□ 0.08
PTPN20-204ENST00000374346 CDC42BPAQ5VT25 1732 aa15.55■□□□□ 0.08
PTPN20-204ENST00000374346 NUP160Q12769 1436 aa15.54■□□□□ 0.08
PTPN20-204ENST00000374346 ZNF326Q5BKZ1 582 aaKnown RBP15.54■□□□□ 0.08
PTPN20-204ENST00000374346 TSPY4P0CV99 314 aa15.54■□□□□ 0.08
PTPN20-204ENST00000374346 TSPY10P0CW01 314 aa15.54■□□□□ 0.08
PTPN20-204ENST00000374346 KDM5CP41229 1560 aa15.53■□□□□ 0.08
PTPN20-204ENST00000374346 ARHGEF12Q9NZN5 1544 aa15.53■□□□□ 0.08
PTPN20-204ENST00000374346 UHRF1BP1Q6BDS2 1440 aa15.53■□□□□ 0.08
PTPN20-204ENST00000374346 NUP155O75694 1391 aa15.52■□□□□ 0.08
PTPN20-204ENST00000374346 C9orf84Q5VXU9 1444 aa15.52■□□□□ 0.08
PTPN20-204ENST00000374346 FANCIQ9NVI1 1328 aa15.52■□□□□ 0.08
PTPN20-204ENST00000374346 ABCA8O94911 1581 aa15.51■□□□□ 0.07
PTPN20-204ENST00000374346 RALGAPBQ86X10 1494 aa15.51■□□□□ 0.07
PTPN20-204ENST00000374346 POLR3GLQ9BT43 218 aa15.51■□□□□ 0.07
PTPN20-204ENST00000374346 KDM5DQ9BY66 1539 aa15.51■□□□□ 0.07
PTPN20-204ENST00000374346 BCORL1Q5H9F3 1711 aa15.5■□□□□ 0.07
PTPN20-204ENST00000374346 DHX29Q7Z478 1369 aaKnown RBP15.5■□□□□ 0.07
PTPN20-204ENST00000374346 ABCC10Q5T3U5 1492 aa15.49■□□□□ 0.07
PTPN20-204ENST00000374346 SMG6Q86US8 1419 aaKnown RBP15.48■□□□□ 0.07
PTPN20-204ENST00000374346 CARD11Q9BXL7 1154 aa15.48■□□□□ 0.07
PTPN20-204ENST00000374346 ATP10BO94823 1461 aa15.47■□□□□ 0.07
PTPN20-204ENST00000374346 ARHGEF5Q12774 1597 aa15.47■□□□□ 0.07
PTPN20-204ENST00000374346 KTN1Q86UP2 1357 aaKnown RBP15.46■□□□□ 0.07
PTPN20-204ENST00000374346 RSPH4AQ5TD94 716 aa15.45■□□□□ 0.06
PTPN20-204ENST00000374346 KIF15Q9NS87 1388 aa15.45■□□□□ 0.06
PTPN20-204ENST00000374346 ERICH6Q7L0X2 663 aa15.44■□□□□ 0.06
PTPN20-204ENST00000374346 TMC1Q8TDI8 760 aa15.44■□□□□ 0.06
PTPN20-204ENST00000374346 NUDCQ9Y266 331 aa15.44■□□□□ 0.06
PTPN20-204ENST00000374346 PTPRGP23470 1445 aa15.43■□□□□ 0.06
PTPN20-204ENST00000374346 B4GALNT3Q6L9W6 998 aa15.42■□□□□ 0.06
PTPN20-204ENST00000374346 CCDC141Q6ZP82 1450 aa15.41■□□□□ 0.06
PTPN20-204ENST00000374346 CNGB1Q14028 1251 aaPredicted RBP15.4■□□□□ 0.06
PTPN20-204ENST00000374346 RALBP1Q15311 655 aa15.4■□□□□ 0.06
PTPN20-204ENST00000374346 DCAF11Q8TEB1 546 aa15.4■□□□□ 0.06
PTPN20-204ENST00000374346 HNRNPMP52272 730 aaKnown RBP eCLIP15.39■□□□□ 0.05
PTPN20-204ENST00000374346 PNISRQ8TF01 805 aaKnown RBP15.39■□□□□ 0.05
PTPN20-204ENST00000374346 KDM2AQ9Y2K7 1162 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms