RNA–Protein interactions for RNA: ENST00000374232.7

SNX30-201, Transcript of sorting nexin family member 30, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX30, Length 7,622 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-201ENST00000374232 NUDCQ9Y266 331 aa18.53■□□□□ 0.56
SNX30-201ENST00000374232 FOXD4L6Q3SYB3 417 aaPredicted RBP18.52■□□□□ 0.56
SNX30-201ENST00000374232 FOXD4L3Q6VB84 417 aaPredicted RBP18.52■□□□□ 0.56
SNX30-201ENST00000374232 PNNQ9H307 717 aaKnown RBP18.52■□□□□ 0.56
SNX30-201ENST00000374232 PAK3O75914 559 aaPredicted RBP18.52■□□□□ 0.55
SNX30-201ENST00000374232 CFDP1Q9UEE9 299 aaPredicted RBP18.51■□□□□ 0.55
SNX30-201ENST00000374232 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.51■□□□□ 0.55
SNX30-201ENST00000374232 BCL11BQ9C0K0 894 aaPredicted RBP18.5■□□□□ 0.55
SNX30-201ENST00000374232 PLEKHD1A6NEE1 506 aa18.49■□□□□ 0.55
SNX30-201ENST00000374232 MFAP1P55081 439 aaKnown RBP18.49■□□□□ 0.55
SNX30-201ENST00000374232 WWC1Q8IX03 1113 aa18.48■□□□□ 0.55
SNX30-201ENST00000374232 NUTM2DQ5VT03 806 aaPredicted RBP18.48■□□□□ 0.55
SNX30-201ENST00000374232 CHMP3Q9Y3E7 222 aa18.48■□□□□ 0.55
SNX30-201ENST00000374232 KIAA2012Q0VF49 1180 aa18.46■□□□□ 0.55
SNX30-201ENST00000374232 ITPRIPQ8IWB1 547 aa18.46■□□□□ 0.55
SNX30-201ENST00000374232 CCDC146Q8IYE0 955 aa18.46■□□□□ 0.55
SNX30-201ENST00000374232 SLC4A3P48751 1232 aa18.46■□□□□ 0.54
SNX30-201ENST00000374232 MORC1Q86VD1 984 aa18.43■□□□□ 0.54
SNX30-201ENST00000374232 CDCA8Q53HL2 280 aa18.43■□□□□ 0.54
SNX30-201ENST00000374232 CLUAP1Q96AJ1 413 aa18.42■□□□□ 0.54
SNX30-201ENST00000374232 A0A0U1RQG5 324 aaPredicted RBP18.4■□□□□ 0.54
SNX30-201ENST00000374232 TRIM6-TRIM34B2RNG4 842 aa18.4■□□□□ 0.54
SNX30-201ENST00000374232 MCCP23508 829 aa18.4■□□□□ 0.54
SNX30-201ENST00000374232 NUTM2FA1L443 756 aa18.4■□□□□ 0.54
SNX30-201ENST00000374232 CEP162Q5TB80 1403 aa18.39■□□□□ 0.53
SNX30-201ENST00000374232 RTF1Q92541 710 aaKnown RBP18.38■□□□□ 0.53
SNX30-201ENST00000374232 PATL2C9JE40 543 aaKnown RBP18.38■□□□□ 0.53
SNX30-201ENST00000374232 L1TD1Q5T7N2 865 aaKnown RBP18.38■□□□□ 0.53
SNX30-201ENST00000374232 SLC4A10Q6U841 1118 aa18.38■□□□□ 0.53
SNX30-201ENST00000374232 BAZ1BQ9UIG0 1483 aaKnown RBP18.37■□□□□ 0.53
SNX30-201ENST00000374232 KIAA1211Q6ZU35 1233 aa18.36■□□□□ 0.53
SNX30-201ENST00000374232 HSPA5P11021 654 aaKnown RBP18.36■□□□□ 0.53
SNX30-201ENST00000374232 TNNT3P45378 269 aaPredicted RBP18.35■□□□□ 0.53
SNX30-201ENST00000374232 CSB-PGBD3P0DP91 1061 aa18.34■□□□□ 0.53
SNX30-201ENST00000374232 VPS53Q5VIR6 699 aa18.33■□□□□ 0.53
SNX30-201ENST00000374232 TMF1P82094 1093 aa18.33■□□□□ 0.52
SNX30-201ENST00000374232 G3V3G9 751 aa18.32■□□□□ 0.52
SNX30-201ENST00000374232 DCAF8Q5TAQ9 597 aa18.32■□□□□ 0.52
SNX30-201ENST00000374232 LTV1Q96GA3 475 aaPredicted RBP18.32■□□□□ 0.52
SNX30-201ENST00000374232 U2AF1L5P0DN76 240 aaPredicted RBP18.32■□□□□ 0.52
SNX30-201ENST00000374232 U2AF1Q01081 240 aaKnown RBP eCLIP18.32■□□□□ 0.52
SNX30-201ENST00000374232 GGT6Q6P531 493 aa18.31■□□□□ 0.52
SNX30-201ENST00000374232 GORABQ5T7V8 394 aa18.3■□□□□ 0.52
SNX30-201ENST00000374232 PES1O00541 588 aaKnown RBP18.3■□□□□ 0.52
SNX30-201ENST00000374232 TMX4Q9H1E5 349 aaPredicted RBP18.3■□□□□ 0.52
SNX30-201ENST00000374232 RASSF8Q8NHQ8 419 aa18.29■□□□□ 0.52
SNX30-201ENST00000374232 RRP7AQ9Y3A4 280 aaKnown RBP18.29■□□□□ 0.52
SNX30-201ENST00000374232 CHMP4BQ9H444 224 aaKnown RBP18.28■□□□□ 0.52
SNX30-201ENST00000374232 TIMELESSQ9UNS1 1208 aa18.28■□□□□ 0.52
SNX30-201ENST00000374232 TAF7LQ5H9L4 462 aa18.28■□□□□ 0.52
SNX30-201ENST00000374232 TOMM22Q9NS69 142 aa18.28■□□□□ 0.52
SNX30-201ENST00000374232 RCAN3Q9UKA8 241 aa18.27■□□□□ 0.52
SNX30-201ENST00000374232 PLIN1O60240 522 aa18.27■□□□□ 0.51
SNX30-201ENST00000374232 BCL2L13Q9BXK5 485 aa18.26■□□□□ 0.51
SNX30-201ENST00000374232 CCAR2Q8N163 923 aaKnown RBP18.26■□□□□ 0.51
SNX30-201ENST00000374232 FBXW7Q969H0 707 aa18.25■□□□□ 0.51
SNX30-201ENST00000374232 MS4A1P11836 297 aa18.25■□□□□ 0.51
SNX30-201ENST00000374232 EIF4G1Q04637 1599 aaKnown RBP18.24■□□□□ 0.51
SNX30-201ENST00000374232 GOLGA6L3A6NEY3 463 aa18.24■□□□□ 0.51
SNX30-201ENST00000374232 GBP4Q96PP9 640 aa18.24■□□□□ 0.51
SNX30-201ENST00000374232 ELL2O00472 640 aaPredicted RBP18.24■□□□□ 0.51
SNX30-201ENST00000374232 TSHZ2Q9NRE2 1034 aa18.24■□□□□ 0.51
SNX30-201ENST00000374232 RSF1Q96T23 1441 aaPredicted RBP18.23■□□□□ 0.51
SNX30-201ENST00000374232 SMC4Q9NTJ3 1288 aa18.22■□□□□ 0.51
SNX30-201ENST00000374232 NGEFQ8N5V2 710 aa18.22■□□□□ 0.51
SNX30-201ENST00000374232 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.22■□□□□ 0.51
SNX30-201ENST00000374232 FRAT2O75474 233 aaPredicted RBP18.21■□□□□ 0.51
SNX30-201ENST00000374232 RAD21O60216 631 aa18.21■□□□□ 0.51
SNX30-201ENST00000374232 FOSBP53539 338 aa18.2■□□□□ 0.5
SNX30-201ENST00000374232 NECTIN2Q92692 538 aa18.19■□□□□ 0.5
SNX30-201ENST00000374232 ZNF592Q92610 1267 aa18.19■□□□□ 0.5
SNX30-201ENST00000374232 RILPL2Q969X0 211 aa18.18■□□□□ 0.5
SNX30-201ENST00000374232 GOLGA3Q08378 1498 aa18.17■□□□□ 0.5
SNX30-201ENST00000374232 KRI1Q8N9T8 703 aaKnown RBP18.17■□□□□ 0.5
SNX30-201ENST00000374232 MARCH6O60337 910 aa18.17■□□□□ 0.5
SNX30-201ENST00000374232 KDM4AO75164 1064 aa18.17■□□□□ 0.5
SNX30-201ENST00000374232 GOLGA6L1Q8N7Z2 621 aa18.16■□□□□ 0.5
SNX30-201ENST00000374232 TCERG1O14776 1098 aaKnown RBP18.15■□□□□ 0.5
SNX30-201ENST00000374232 CEP89Q96ST8 783 aa18.15■□□□□ 0.5
SNX30-201ENST00000374232 CALD1Q05682 793 aaKnown RBP18.15■□□□□ 0.5
SNX30-201ENST00000374232 PKD2Q13563 968 aa18.15■□□□□ 0.5
SNX30-201ENST00000374232 CCDC180Q9P1Z9 1646 aa18.14■□□□□ 0.49
SNX30-201ENST00000374232 TPM4P67936 248 aa18.13■□□□□ 0.49
SNX30-201ENST00000374232 VSIG10Q8N0Z9 540 aa18.13■□□□□ 0.49
SNX30-201ENST00000374232 RWDD1Q9H446 243 aaPredicted RBP18.13■□□□□ 0.49
SNX30-201ENST00000374232 GTF2E1P29083 439 aaPredicted RBP18.12■□□□□ 0.49
SNX30-201ENST00000374232 ROCK2O75116 1388 aaKnown RBP18.12■□□□□ 0.49
SNX30-201ENST00000374232 KTN1Q86UP2 1357 aaKnown RBP18.12■□□□□ 0.49
SNX30-201ENST00000374232 PTMSP20962 102 aa18.12■□□□□ 0.49
SNX30-201ENST00000374232 HDGFL2Q7Z4V5 671 aaPredicted RBP18.11■□□□□ 0.49
SNX30-201ENST00000374232 SAMD1Q6SPF0 538 aaPredicted RBP18.1■□□□□ 0.49
SNX30-201ENST00000374232 MSH5O43196 834 aa18.1■□□□□ 0.49
SNX30-201ENST00000374232 ZNF428Q96B54 188 aa18.1■□□□□ 0.49
SNX30-201ENST00000374232 IPO9Q96P70 1041 aaKnown RBP18.1■□□□□ 0.49
SNX30-201ENST00000374232 IPO8O15397 1037 aaKnown RBP18.1■□□□□ 0.49
SNX30-201ENST00000374232 SF3A1Q15459 793 aaKnown RBP18.09■□□□□ 0.49
SNX30-201ENST00000374232 CCNB3Q8WWL7 1395 aa18.09■□□□□ 0.49
SNX30-201ENST00000374232 MCTP1Q6DN14 999 aa18.08■□□□□ 0.48
SNX30-201ENST00000374232 CNKSR2Q8WXI2 1034 aa18.07■□□□□ 0.48
SNX30-201ENST00000374232 HSP90AA2PQ14568 343 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms