RNA–Protein interactions for RNA: ENST00000373833.10

RCC1-203, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCC1, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-203ENST00000373833 FOXD1Q16676 465 aa15.48■□□□□ 0.07
RCC1-203ENST00000373833 MYOM3Q5VTT5 1437 aa15.47■□□□□ 0.07
RCC1-203ENST00000373833 EHBP1L1Q8N3D4 1523 aa15.44■□□□□ 0.06
RCC1-203ENST00000373833 GPATCH8Q9UKJ3 1502 aaKnown RBP15.44■□□□□ 0.06
RCC1-203ENST00000373833 TTC37Q6PGP7 1564 aa15.44■□□□□ 0.06
RCC1-203ENST00000373833 SUPT6HQ7KZ85 1726 aaKnown RBP15.44■□□□□ 0.06
RCC1-203ENST00000373833 TRIM52Q96A61 297 aa15.44■□□□□ 0.06
RCC1-203ENST00000373833 TSPOAP1O95153 1857 aa15.44■□□□□ 0.06
RCC1-203ENST00000373833 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.43■□□□□ 0.06
RCC1-203ENST00000373833 KDM5BQ9UGL1 1544 aa15.43■□□□□ 0.06
RCC1-203ENST00000373833 PLPPR3Q6T4P5 718 aa15.42■□□□□ 0.06
RCC1-203ENST00000373833 BCL11AQ9H165 835 aa15.42■□□□□ 0.06
RCC1-203ENST00000373833 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.41■□□□□ 0.06
RCC1-203ENST00000373833 ARHGAP5Q13017 1502 aa15.4■□□□□ 0.06
RCC1-203ENST00000373833 RRBP1Q9P2E9 1410 aaKnown RBP15.4■□□□□ 0.06
RCC1-203ENST00000373833 SENP3Q9H4L4 574 aaPredicted RBP15.39■□□□□ 0.06
RCC1-203ENST00000373833 WDR7Q9Y4E6 1490 aa15.39■□□□□ 0.05
RCC1-203ENST00000373833 ERICH6Q7L0X2 663 aa15.38■□□□□ 0.05
RCC1-203ENST00000373833 MAP3K1Q13233 1512 aa15.37■□□□□ 0.05
RCC1-203ENST00000373833 PTPN23Q9H3S7 1636 aa15.37■□□□□ 0.05
RCC1-203ENST00000373833 RAB3GAP2Q9H2M9 1393 aa15.36■□□□□ 0.05
RCC1-203ENST00000373833 EFCAB2Q5VUJ9 269 aa15.36■□□□□ 0.05
RCC1-203ENST00000373833 ABCC10Q5T3U5 1492 aa15.36■□□□□ 0.05
RCC1-203ENST00000373833 TSPY4P0CV99 314 aa15.35■□□□□ 0.05
RCC1-203ENST00000373833 TSPY10P0CW01 314 aa15.35■□□□□ 0.05
RCC1-203ENST00000373833 CD109Q6YHK3 1445 aa15.35■□□□□ 0.05
RCC1-203ENST00000373833 CAMSAP2Q08AD1 1489 aa15.34■□□□□ 0.05
RCC1-203ENST00000373833 SIN3AQ96ST3 1273 aa15.34■□□□□ 0.05
RCC1-203ENST00000373833 CDC42BPAQ5VT25 1732 aa15.34■□□□□ 0.05
RCC1-203ENST00000373833 UHRF1BP1LA0JNW5 1464 aa15.33■□□□□ 0.04
RCC1-203ENST00000373833 MLECQ14165 292 aa15.33■□□□□ 0.04
RCC1-203ENST00000373833 TRAPPC8Q9Y2L5 1435 aa15.32■□□□□ 0.04
RCC1-203ENST00000373833 ARHGEF12Q9NZN5 1544 aa15.32■□□□□ 0.04
RCC1-203ENST00000373833 DIEXFQ68CQ4 756 aaKnown RBP15.31■□□□□ 0.04
RCC1-203ENST00000373833 ABCC5O15440 1437 aa15.31■□□□□ 0.04
RCC1-203ENST00000373833 SYCP2Q9BX26 1530 aa15.31■□□□□ 0.04
RCC1-203ENST00000373833 CDC42BPBQ9Y5S2 1711 aa15.31■□□□□ 0.04
RCC1-203ENST00000373833 SCAPERQ9BY12 1400 aa15.29■□□□□ 0.04
RCC1-203ENST00000373833 CENPBP07199 599 aaPredicted RBP15.29■□□□□ 0.04
RCC1-203ENST00000373833 FANCAO15360 1455 aa15.29■□□□□ 0.04
RCC1-203ENST00000373833 KDM6BO15054 1643 aa15.28■□□□□ 0.04
RCC1-203ENST00000373833 DAPK1P53355 1430 aa15.28■□□□□ 0.04
RCC1-203ENST00000373833 PLCH2O75038 1416 aa15.26■□□□□ 0.03
RCC1-203ENST00000373833 SAMD9LQ8IVG5 1584 aa15.26■□□□□ 0.03
RCC1-203ENST00000373833 GGT6Q6P531 493 aa15.26■□□□□ 0.03
RCC1-203ENST00000373833 SPAG9O60271 1321 aaKnown RBP15.25■□□□□ 0.03
RCC1-203ENST00000373833 SETD5Q9C0A6 1442 aa15.23■□□□□ 0.03
RCC1-203ENST00000373833 ADGRL1O94910 1474 aa15.23■□□□□ 0.03
RCC1-203ENST00000373833 KIF3BO15066 747 aa15.22■□□□□ 0.03
RCC1-203ENST00000373833 NAIPQ13075 1403 aa15.22■□□□□ 0.03
RCC1-203ENST00000373833 MIA2Q96PC5 1412 aa15.21■□□□□ 0.03
RCC1-203ENST00000373833 MYO5CQ9NQX4 1742 aa15.21■□□□□ 0.03
RCC1-203ENST00000373833 C9orf84Q5VXU9 1444 aa15.21■□□□□ 0.03
RCC1-203ENST00000373833 AKNAQ7Z591 1439 aa15.21■□□□□ 0.03
RCC1-203ENST00000373833 MBD5Q9P267 1494 aa15.2■□□□□ 0.02
RCC1-203ENST00000373833 SLC4A1APQ9BWU0 796 aaKnown RBP15.2■□□□□ 0.02
RCC1-203ENST00000373833 YTHDC1Q96MU7 727 aaKnown RBP15.2■□□□□ 0.02
RCC1-203ENST00000373833 KIF15Q9NS87 1388 aa15.2■□□□□ 0.02
RCC1-203ENST00000373833 COL17A1Q9UMD9 1497 aaPredicted RBP15.19■□□□□ 0.02
RCC1-203ENST00000373833 PREX2Q70Z35 1606 aa15.18■□□□□ 0.02
RCC1-203ENST00000373833 DHX57Q6P158 1386 aaKnown RBP15.17■□□□□ 0.02
RCC1-203ENST00000373833 HIRIP3Q9BW71 556 aaPredicted RBP15.17■□□□□ 0.02
RCC1-203ENST00000373833 NCOA1Q15788 1441 aa15.17■□□□□ 0.02
RCC1-203ENST00000373833 ARID4BQ4LE39 1312 aaPredicted RBP15.17■□□□□ 0.02
RCC1-203ENST00000373833 ITSN2Q9NZM3 1697 aa15.15■□□□□ 0.02
RCC1-203ENST00000373833 CFAP65Q6ZU64 1925 aaKnown RBP15.15■□□□□ 0.02
RCC1-203ENST00000373833 TCOF1Q13428 1488 aaKnown RBP15.15■□□□□ 0.02
RCC1-203ENST00000373833 PLEKHH2Q8IVE3 1493 aa15.14■□□□□ 0.02
RCC1-203ENST00000373833 YEATS2Q9ULM3 1422 aa15.14■□□□□ 0.01
RCC1-203ENST00000373833 ZNF326Q5BKZ1 582 aaKnown RBP15.14■□□□□ 0.01
RCC1-203ENST00000373833 MPHOSPH9Q99550 1183 aa15.14■□□□□ 0.01
RCC1-203ENST00000373833 NUP155O75694 1391 aa15.14■□□□□ 0.01
RCC1-203ENST00000373833 DIP2BQ9P265 1576 aa15.14■□□□□ 0.01
RCC1-203ENST00000373833 ANKRD30AQ9BXX3 1397 aa15.13■□□□□ 0.01
RCC1-203ENST00000373833 PKD2Q13563 968 aa15.13■□□□□ 0.01
RCC1-203ENST00000373833 ABCA9Q8IUA7 1624 aa15.12■□□□□ 0.01
RCC1-203ENST00000373833 ANKRD50Q9ULJ7 1429 aa15.12■□□□□ 0.01
RCC1-203ENST00000373833 CCDC141Q6ZP82 1450 aa15.12■□□□□ 0.01
RCC1-203ENST00000373833 RGL3Q3MIN7 710 aa15.12■□□□□ 0.01
RCC1-203ENST00000373833 DNMT1P26358 1616 aaKnown RBP15.11■□□□□ 0.01
RCC1-203ENST00000373833 HFM1A2PYH4 1435 aa15.11■□□□□ 0.01
RCC1-203ENST00000373833 MAPKBP1O60336 1514 aa15.1■□□□□ 0.01
RCC1-203ENST00000373833 KIF13AQ9H1H9 1805 aa15.1■□□□□ 0.01
RCC1-203ENST00000373833 NUTM2DQ5VT03 806 aaPredicted RBP15.08■□□□□ 0.01
RCC1-203ENST00000373833 ABCC1P33527 1531 aa15.08■□□□□ 0
RCC1-203ENST00000373833 KDM2AQ9Y2K7 1162 aa15.07■□□□□ 0
RCC1-203ENST00000373833 CHGAP10645 457 aaKnown RBP15.06■□□□□ 0
RCC1-203ENST00000373833 CEBPAP49715 358 aaPredicted RBP15.05■□□□□ -0
RCC1-203ENST00000373833 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.05■□□□□ -0
RCC1-203ENST00000373833 DENND4BO75064 1496 aaPredicted RBP15.04■□□□□ -0
RCC1-203ENST00000373833 FBXO31Q5XUX0 539 aaPredicted RBP15.02■□□□□ -0
RCC1-203ENST00000373833 POGZQ7Z3K3 1410 aa15.01□□□□□ -0.01
RCC1-203ENST00000373833 MAP3K4Q9Y6R4 1608 aa15.01□□□□□ -0.01
RCC1-203ENST00000373833 PPRC1Q5VV67 1664 aaKnown RBP15.01□□□□□ -0.01
RCC1-203ENST00000373833 KIAA1107Q9UPP5 1409 aa15.01□□□□□ -0.01
RCC1-203ENST00000373833 RSPH4AQ5TD94 716 aa15□□□□□ -0.01
RCC1-203ENST00000373833 WASHC2CQ9Y4E1 1318 aa15□□□□□ -0.01
RCC1-203ENST00000373833 ATP7AQ04656 1500 aa14.98□□□□□ -0.01
RCC1-203ENST00000373833 ZNF518AQ6AHZ1 1483 aa14.98□□□□□ -0.01
RCC1-203ENST00000373833 ZNF316A6NFI3 1004 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms