RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 ARHGAP35Q9NRY4 1499 aa23■■□□□ 1.27
COL16A1-203ENST00000373672 KTN1Q86UP2 1357 aaKnown RBP22.99■■□□□ 1.27
COL16A1-203ENST00000373672 GOLGA2Q08379 1002 aa22.99■■□□□ 1.27
COL16A1-203ENST00000373672 CUX2O14529 1486 aa22.98■■□□□ 1.27
COL16A1-203ENST00000373672 CHAF1AQ13111 956 aaPredicted RBP22.96■■□□□ 1.27
COL16A1-203ENST00000373672 RTF1Q92541 710 aaKnown RBP22.92■■□□□ 1.26
COL16A1-203ENST00000373672 IPO8O15397 1037 aaKnown RBP22.92■■□□□ 1.26
COL16A1-203ENST00000373672 MSNP26038 577 aaKnown RBP22.92■■□□□ 1.26
COL16A1-203ENST00000373672 SOGA1O94964 1423 aa22.91■■□□□ 1.26
COL16A1-203ENST00000373672 VPS8Q8N3P4 1428 aa22.91■■□□□ 1.26
COL16A1-203ENST00000373672 HDGFL2Q7Z4V5 671 aaPredicted RBP22.9■■□□□ 1.26
COL16A1-203ENST00000373672 PKD2Q13563 968 aa22.89■■□□□ 1.25
COL16A1-203ENST00000373672 SOX12O15370 315 aa22.89■■□□□ 1.25
COL16A1-203ENST00000373672 SPRYD3Q8NCJ5 442 aa22.89■■□□□ 1.25
COL16A1-203ENST00000373672 PTMSP20962 102 aa22.87■■□□□ 1.25
COL16A1-203ENST00000373672 SAFB2Q14151 953 aaKnown RBP eCLIP22.87■■□□□ 1.25
COL16A1-203ENST00000373672 RALBP1Q15311 655 aa22.86■■□□□ 1.25
COL16A1-203ENST00000373672 RBM19Q9Y4C8 960 aaKnown RBP22.86■■□□□ 1.25
COL16A1-203ENST00000373672 CALD1Q05682 793 aaKnown RBP22.86■■□□□ 1.25
COL16A1-203ENST00000373672 DEKP35659 375 aaKnown RBP22.85■■□□□ 1.25
COL16A1-203ENST00000373672 DRC7Q8IY82 874 aa22.85■■□□□ 1.25
COL16A1-203ENST00000373672 ROCK2O75116 1388 aaKnown RBP22.84■■□□□ 1.25
COL16A1-203ENST00000373672 RCAN3Q9UKA8 241 aa22.84■■□□□ 1.25
COL16A1-203ENST00000373672 RWDD1Q9H446 243 aaPredicted RBP22.83■■□□□ 1.25
COL16A1-203ENST00000373672 MLECQ14165 292 aa22.82■■□□□ 1.24
COL16A1-203ENST00000373672 KIAA1211Q6ZU35 1233 aa22.81■■□□□ 1.24
COL16A1-203ENST00000373672 GBP4Q96PP9 640 aa22.81■■□□□ 1.24
COL16A1-203ENST00000373672 STK26Q9P289 416 aa22.79■■□□□ 1.24
COL16A1-203ENST00000373672 TCERG1O14776 1098 aaKnown RBP22.79■■□□□ 1.24
COL16A1-203ENST00000373672 GNL2Q13823 731 aaKnown RBP22.78■■□□□ 1.24
COL16A1-203ENST00000373672 ITPRIPQ8IWB1 547 aa22.78■■□□□ 1.24
COL16A1-203ENST00000373672 U2AF1L5P0DN76 240 aaPredicted RBP22.77■■□□□ 1.24
COL16A1-203ENST00000373672 U2AF1Q01081 240 aaKnown RBP eCLIP22.77■■□□□ 1.24
COL16A1-203ENST00000373672 FOXD1Q16676 465 aa22.77■■□□□ 1.24
COL16A1-203ENST00000373672 CARMIL2Q6F5E8 1435 aa22.77■■□□□ 1.24
COL16A1-203ENST00000373672 APBB1O00213 710 aa22.77■■□□□ 1.24
COL16A1-203ENST00000373672 GGT6Q6P531 493 aa22.77■■□□□ 1.24
COL16A1-203ENST00000373672 EIF3AQ14152 1382 aaKnown RBP22.77■■□□□ 1.24
COL16A1-203ENST00000373672 CECR2Q9BXF3 1484 aa22.77■■□□□ 1.24
COL16A1-203ENST00000373672 MPHOSPH9Q99550 1183 aa22.76■■□□□ 1.23
COL16A1-203ENST00000373672 RAB3GAP2Q9H2M9 1393 aa22.76■■□□□ 1.23
COL16A1-203ENST00000373672 KANK4Q5T7N3 995 aaPredicted RBP22.75■■□□□ 1.23
COL16A1-203ENST00000373672 PMFBP1Q8TBY8 1022 aa22.74■■□□□ 1.23
COL16A1-203ENST00000373672 ANKRD30AQ9BXX3 1397 aa22.73■■□□□ 1.23
COL16A1-203ENST00000373672 NUP155O75694 1391 aa22.73■■□□□ 1.23
COL16A1-203ENST00000373672 FMN1Q68DA7 1419 aa22.72■■□□□ 1.23
COL16A1-203ENST00000373672 HTATSF1O43719 755 aaKnown RBP22.71■■□□□ 1.23
COL16A1-203ENST00000373672 CHMP4AQ9BY43 222 aa22.7■■□□□ 1.22
COL16A1-203ENST00000373672 SYAP1Q96A49 352 aaPredicted RBP22.68■■□□□ 1.22
COL16A1-203ENST00000373672 CLSTN1O94985 981 aa22.67■■□□□ 1.22
COL16A1-203ENST00000373672 KIAA2012Q0VF49 1180 aa22.67■■□□□ 1.22
COL16A1-203ENST00000373672 ISY1Q9ULR0 285 aaKnown RBP22.67■■□□□ 1.22
COL16A1-203ENST00000373672 SPAG9O60271 1321 aaKnown RBP22.65■■□□□ 1.22
COL16A1-203ENST00000373672 PAK3O75914 559 aaPredicted RBP22.65■■□□□ 1.22
COL16A1-203ENST00000373672 SLKQ9H2G2 1235 aaPredicted RBP22.65■■□□□ 1.22
COL16A1-203ENST00000373672 STK31Q9BXU1 1019 aa22.65■■□□□ 1.22
COL16A1-203ENST00000373672 CCDC88BA6NC98 1476 aa22.64■■□□□ 1.22
COL16A1-203ENST00000373672 EFCAB2Q5VUJ9 269 aa22.64■■□□□ 1.21
COL16A1-203ENST00000373672 ABCC8Q09428 1581 aa22.64■■□□□ 1.21
COL16A1-203ENST00000373672 SMC4Q9NTJ3 1288 aa22.63■■□□□ 1.21
COL16A1-203ENST00000373672 GPATCH3Q96I76 525 aa22.62■■□□□ 1.21
COL16A1-203ENST00000373672 MFAP1P55081 439 aaKnown RBP22.62■■□□□ 1.21
COL16A1-203ENST00000373672 CSB-PGBD3P0DP91 1061 aa22.62■■□□□ 1.21
COL16A1-203ENST00000373672 GZF1Q9H116 711 aaPredicted RBP22.61■■□□□ 1.21
COL16A1-203ENST00000373672 HMMRO75330 724 aa22.61■■□□□ 1.21
COL16A1-203ENST00000373672 TRHP20396 242 aaPredicted RBP22.6■■□□□ 1.21
COL16A1-203ENST00000373672 TERF2IPQ9NYB0 399 aa22.6■■□□□ 1.21
COL16A1-203ENST00000373672 HDAC5Q9UQL6 1122 aa22.6■■□□□ 1.21
COL16A1-203ENST00000373672 PDE3BQ13370 1112 aa22.6■■□□□ 1.21
COL16A1-203ENST00000373672 TPM4P67936 248 aa22.58■■□□□ 1.21
COL16A1-203ENST00000373672 NLRP13Q86W25 1043 aa22.57■■□□□ 1.2
COL16A1-203ENST00000373672 IPO9Q96P70 1041 aaKnown RBP22.57■■□□□ 1.2
COL16A1-203ENST00000373672 CENPJQ9HC77 1338 aaPredicted RBP22.57■■□□□ 1.2
COL16A1-203ENST00000373672 GOLGA6L3A6NEY3 463 aa22.56■■□□□ 1.2
COL16A1-203ENST00000373672 PHLDB1Q86UU1 1377 aa22.56■■□□□ 1.2
COL16A1-203ENST00000373672 ZNF330Q9Y3S2 320 aaPredicted RBP22.56■■□□□ 1.2
COL16A1-203ENST00000373672 PDS5BQ9NTI5 1447 aa22.55■■□□□ 1.2
COL16A1-203ENST00000373672 CSPP1Q1MSJ5 1256 aa22.55■■□□□ 1.2
COL16A1-203ENST00000373672 TRIM6-TRIM34B2RNG4 842 aa22.55■■□□□ 1.2
COL16A1-203ENST00000373672 LMOD3Q0VAK6 560 aa22.55■■□□□ 1.2
COL16A1-203ENST00000373672 SMARCA2P51531 1590 aa22.54■■□□□ 1.2
COL16A1-203ENST00000373672 GORABQ5T7V8 394 aa22.54■■□□□ 1.2
COL16A1-203ENST00000373672 L3MBTL2Q969R5 705 aa22.54■■□□□ 1.2
COL16A1-203ENST00000373672 HSP90B1P14625 803 aaKnown RBP22.53■■□□□ 1.2
COL16A1-203ENST00000373672 CCDC146Q8IYE0 955 aa22.53■■□□□ 1.2
COL16A1-203ENST00000373672 CCDC34Q96HJ3 373 aa22.52■■□□□ 1.19
COL16A1-203ENST00000373672 MROH2BQ7Z745 1585 aa22.51■■□□□ 1.19
COL16A1-203ENST00000373672 KIF3BO15066 747 aa22.51■■□□□ 1.19
COL16A1-203ENST00000373672 KIF15Q9NS87 1388 aa22.5■■□□□ 1.19
COL16A1-203ENST00000373672 CHMP3Q9Y3E7 222 aa22.5■■□□□ 1.19
COL16A1-203ENST00000373672 TSHZ2Q9NRE2 1034 aa22.49■■□□□ 1.19
COL16A1-203ENST00000373672 RSPH4AQ5TD94 716 aa22.49■■□□□ 1.19
COL16A1-203ENST00000373672 TAF7LQ5H9L4 462 aa22.49■■□□□ 1.19
COL16A1-203ENST00000373672 CCDC18Q5T9S5 1454 aa22.48■■□□□ 1.19
COL16A1-203ENST00000373672 CLUAP1Q96AJ1 413 aa22.48■■□□□ 1.19
COL16A1-203ENST00000373672 TDRD9Q8NDG6 1382 aaKnown RBP22.48■■□□□ 1.19
COL16A1-203ENST00000373672 SLC4A10Q6U841 1118 aa22.47■■□□□ 1.19
COL16A1-203ENST00000373672 HNRNPMP52272 730 aaKnown RBP eCLIP22.46■■□□□ 1.19
COL16A1-203ENST00000373672 MYBBP1AQ9BQG0 1328 aaKnown RBP22.45■■□□□ 1.18
COL16A1-203ENST00000373672 NOC3LQ8WTT2 800 aaKnown RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms