RNA–Protein interactions for RNA: ENST00000373275.4

BRWD3-201, Transcript of bromodomain and WD repeat domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRWD3, Length 11,381 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD3-201ENST00000373275 ATP6V1DQ9Y5K8 247 aa8.36□□□□□ -1.07
BRWD3-201ENST00000373275 FGD1P98174 961 aa8.35□□□□□ -1.07
BRWD3-201ENST00000373275 HSP90B1P14625 803 aaKnown RBP8.35□□□□□ -1.07
BRWD3-201ENST00000373275 AK7Q96M32 723 aa8.34□□□□□ -1.07
BRWD3-201ENST00000373275 PES1O00541 588 aaKnown RBP8.34□□□□□ -1.07
BRWD3-201ENST00000373275 ERCC4Q92889 916 aaPredicted RBP8.33□□□□□ -1.08
BRWD3-201ENST00000373275 MRE11P49959 708 aa8.33□□□□□ -1.08
BRWD3-201ENST00000373275 CAVIN1Q6NZI2 390 aaKnown RBP8.33□□□□□ -1.08
BRWD3-201ENST00000373275 CHMP4CQ96CF2 233 aa8.33□□□□□ -1.08
BRWD3-201ENST00000373275 H0YHG0 523 aa8.33□□□□□ -1.08
BRWD3-201ENST00000373275 INCENPQ9NQS7 918 aa8.33□□□□□ -1.08
BRWD3-201ENST00000373275 DHX8Q14562 1220 aaKnown RBP8.32□□□□□ -1.08
BRWD3-201ENST00000373275 LEKR1Q6ZMV7 388 aa8.32□□□□□ -1.08
BRWD3-201ENST00000373275 PDCL2Q8N4E4 241 aa8.32□□□□□ -1.08
BRWD3-201ENST00000373275 KCNJ4P48050 445 aa8.32□□□□□ -1.08
BRWD3-201ENST00000373275 SLKQ9H2G2 1235 aaPredicted RBP8.32□□□□□ -1.08
BRWD3-201ENST00000373275 KIF3AQ9Y496 699 aa8.31□□□□□ -1.08
BRWD3-201ENST00000373275 MAPK8IP3Q9UPT6 1336 aa8.31□□□□□ -1.08
BRWD3-201ENST00000373275 PMFBP1Q8TBY8 1022 aa8.3□□□□□ -1.08
BRWD3-201ENST00000373275 CAGE1Q8TC20 777 aa8.3□□□□□ -1.08
BRWD3-201ENST00000373275 RWDD1Q9H446 243 aaPredicted RBP8.3□□□□□ -1.08
BRWD3-201ENST00000373275 ST18O60284 1047 aa8.3□□□□□ -1.08
BRWD3-201ENST00000373275 TPM1P09493 284 aa8.3□□□□□ -1.08
BRWD3-201ENST00000373275 CCDC39Q9UFE4 941 aa8.3□□□□□ -1.08
BRWD3-201ENST00000373275 KNSTRNQ9Y448 316 aa8.3□□□□□ -1.08
BRWD3-201ENST00000373275 ANO8Q9HCE9 1232 aaPredicted RBP8.3□□□□□ -1.08
BRWD3-201ENST00000373275 TAF7LQ5H9L4 462 aa8.3□□□□□ -1.08
BRWD3-201ENST00000373275 GOLGA6L19H0YKK7 550 aa8.29□□□□□ -1.08
BRWD3-201ENST00000373275 GOLGA6L7A0A1B0GV03 622 aa8.29□□□□□ -1.08
BRWD3-201ENST00000373275 PHLDB1Q86UU1 1377 aa8.29□□□□□ -1.08
BRWD3-201ENST00000373275 DYDC1Q8WWB3 177 aa8.29□□□□□ -1.08
BRWD3-201ENST00000373275 TSR1Q2NL82 804 aaKnown RBP8.29□□□□□ -1.08
BRWD3-201ENST00000373275 RUFY1Q96T51 708 aa8.29□□□□□ -1.08
BRWD3-201ENST00000373275 KIAA1211Q6ZU35 1233 aa8.29□□□□□ -1.08
BRWD3-201ENST00000373275 NEXNQ0ZGT2 675 aa8.29□□□□□ -1.08
BRWD3-201ENST00000373275 CC2D1BQ5T0F9 858 aaKnown RBP8.28□□□□□ -1.08
BRWD3-201ENST00000373275 ZRSR2Q15696 482 aaKnown RBP8.28□□□□□ -1.08
BRWD3-201ENST00000373275 PATL2C9JE40 543 aaKnown RBP8.28□□□□□ -1.08
BRWD3-201ENST00000373275 IPO8O15397 1037 aaKnown RBP8.28□□□□□ -1.08
BRWD3-201ENST00000373275 SSR1P43307 286 aaKnown RBP8.28□□□□□ -1.08
BRWD3-201ENST00000373275 PDCL3Q9H2J4 239 aa8.28□□□□□ -1.08
BRWD3-201ENST00000373275 CALCOCO1Q9P1Z2 691 aa8.27□□□□□ -1.08
BRWD3-201ENST00000373275 CCP110O43303 1012 aa8.27□□□□□ -1.09
BRWD3-201ENST00000373275 DDX49Q9Y6V7 483 aaKnown RBP8.27□□□□□ -1.09
BRWD3-201ENST00000373275 GNL2Q13823 731 aaKnown RBP8.27□□□□□ -1.09
BRWD3-201ENST00000373275 FAM107BQ9H098 131 aa8.27□□□□□ -1.09
BRWD3-201ENST00000373275 PDE3BQ13370 1112 aa8.27□□□□□ -1.09
BRWD3-201ENST00000373275 FAM161AQ3B820 660 aa8.26□□□□□ -1.09
BRWD3-201ENST00000373275 NUDCQ9Y266 331 aa8.26□□□□□ -1.09
BRWD3-201ENST00000373275 IPO7O95373 1038 aaKnown RBP8.25□□□□□ -1.09
BRWD3-201ENST00000373275 TPRNQ4KMQ1 711 aa8.25□□□□□ -1.09
BRWD3-201ENST00000373275 RCAN3Q9UKA8 241 aa8.25□□□□□ -1.09
BRWD3-201ENST00000373275 CCDC173Q0VFZ6 552 aa8.25□□□□□ -1.09
BRWD3-201ENST00000373275 CENPQQ7L2Z9 268 aaPredicted RBP8.24□□□□□ -1.09
BRWD3-201ENST00000373275 CEP89Q96ST8 783 aa8.24□□□□□ -1.09
BRWD3-201ENST00000373275 KIAA0754O94854 1291 aa8.24□□□□□ -1.09
BRWD3-201ENST00000373275 MNS1Q8NEH6 495 aa8.24□□□□□ -1.09
BRWD3-201ENST00000373275 BECN2A8MW95 431 aa8.23□□□□□ -1.09
BRWD3-201ENST00000373275 GIMAP7Q8NHV1 300 aa8.23□□□□□ -1.09
BRWD3-201ENST00000373275 NASPP49321 788 aaPredicted RBP8.23□□□□□ -1.09
BRWD3-201ENST00000373275 AXDND1Q5T1B0 1012 aaPredicted RBP8.23□□□□□ -1.09
BRWD3-201ENST00000373275 DNAJC2Q99543 621 aaKnown RBP8.23□□□□□ -1.09
BRWD3-201ENST00000373275 CHMP5Q9NZZ3 219 aa8.23□□□□□ -1.09
BRWD3-201ENST00000373275 CTR9Q6PD62 1173 aa8.23□□□□□ -1.09
BRWD3-201ENST00000373275 CHMP4AQ9BY43 222 aa8.23□□□□□ -1.09
BRWD3-201ENST00000373275 SPRYD3Q8NCJ5 442 aa8.22□□□□□ -1.09
BRWD3-201ENST00000373275 EIF3JO75822 258 aaKnown RBP8.22□□□□□ -1.09
BRWD3-201ENST00000373275 FRAT1Q92837 279 aaPredicted RBP8.22□□□□□ -1.09
BRWD3-201ENST00000373275 RNF20Q5VTR2 975 aa8.22□□□□□ -1.09
BRWD3-201ENST00000373275 MYO6Q9UM54 1294 aa8.22□□□□□ -1.09
BRWD3-201ENST00000373275 IRX3P78415 501 aaPredicted RBP8.22□□□□□ -1.09
BRWD3-201ENST00000373275 DDX11Q96FC9 970 aa8.22□□□□□ -1.09
BRWD3-201ENST00000373275 LETM1O95202 739 aaPredicted RBP8.21□□□□□ -1.09
BRWD3-201ENST00000373275 HSP90AB3PQ58FF7 597 aa8.21□□□□□ -1.09
BRWD3-201ENST00000373275 NUCB2P80303 420 aa8.21□□□□□ -1.1
BRWD3-201ENST00000373275 CCAR2Q8N163 923 aaKnown RBP8.21□□□□□ -1.1
BRWD3-201ENST00000373275 HOMER1Q86YM7 354 aa8.21□□□□□ -1.1
BRWD3-201ENST00000373275 HOMEZQ8IX15 550 aa8.21□□□□□ -1.1
BRWD3-201ENST00000373275 PDE4AP27815 886 aa8.21□□□□□ -1.1
BRWD3-201ENST00000373275 RSF1Q96T23 1441 aaPredicted RBP8.2□□□□□ -1.1
BRWD3-201ENST00000373275 R3HCC1Q9Y3T6 440 aaKnown RBP8.2□□□□□ -1.1
BRWD3-201ENST00000373275 CLIP1P30622 1438 aa8.2□□□□□ -1.1
BRWD3-201ENST00000373275 AAMPQ13685 434 aa8.2□□□□□ -1.1
BRWD3-201ENST00000373275 ANKRD20A12PQ8NF67 263 aa8.2□□□□□ -1.1
BRWD3-201ENST00000373275 HDAC5Q9UQL6 1122 aa8.2□□□□□ -1.1
BRWD3-201ENST00000373275 ZBTB7CA1YPR0 619 aa8.2□□□□□ -1.1
BRWD3-201ENST00000373275 GOLGA6L10A6NI86 522 aa8.2□□□□□ -1.1
BRWD3-201ENST00000373275 MEX3CQ5U5Q3 659 aaKnown RBP8.19□□□□□ -1.1
BRWD3-201ENST00000373275 OS9Q13438 667 aaPredicted RBP8.19□□□□□ -1.1
BRWD3-201ENST00000373275 RALBP1Q15311 655 aa8.19□□□□□ -1.1
BRWD3-201ENST00000373275 HOOK1Q9UJC3 728 aaKnown RBP8.19□□□□□ -1.1
BRWD3-201ENST00000373275 PDIA4P13667 645 aaKnown RBP8.19□□□□□ -1.1
BRWD3-201ENST00000373275 ZNF592Q92610 1267 aa8.19□□□□□ -1.1
BRWD3-201ENST00000373275 ZMYND15Q9H091 742 aa8.18□□□□□ -1.1
BRWD3-201ENST00000373275 NAT10Q9H0A0 1025 aaKnown RBP8.18□□□□□ -1.1
BRWD3-201ENST00000373275 MBD3O95983 291 aa8.18□□□□□ -1.1
BRWD3-201ENST00000373275 IFT57Q9NWB7 429 aa8.18□□□□□ -1.1
BRWD3-201ENST00000373275 NFKBIBQ15653 356 aa8.18□□□□□ -1.1
BRWD3-201ENST00000373275 GPATCH3Q96I76 525 aa8.17□□□□□ -1.1
BRWD3-201ENST00000373275 NAP1L2Q9ULW6 460 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms