RNA–Protein interactions for RNA: ENST00000373201.5

PTPRT-207, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-207ENST00000373201 CEP89Q96ST8 783 aa11.56□□□□□ -0.56
PTPRT-207ENST00000373201 ARID3AQ99856 593 aa11.56□□□□□ -0.56
PTPRT-207ENST00000373201 KLHL34Q8N239 644 aa11.56□□□□□ -0.56
PTPRT-207ENST00000373201 MSH5O43196 834 aa11.56□□□□□ -0.56
PTPRT-207ENST00000373201 FRAT2O75474 233 aaPredicted RBP11.56□□□□□ -0.56
PTPRT-207ENST00000373201 MARCH6O60337 910 aa11.55□□□□□ -0.56
PTPRT-207ENST00000373201 MSNP26038 577 aaKnown RBP11.55□□□□□ -0.56
PTPRT-207ENST00000373201 HSP90B1P14625 803 aaKnown RBP11.54□□□□□ -0.56
PTPRT-207ENST00000373201 PHF23Q9BUL5 403 aaPredicted RBP11.54□□□□□ -0.56
PTPRT-207ENST00000373201 AEBP2Q6ZN18 517 aaPredicted RBP11.54□□□□□ -0.56
PTPRT-207ENST00000373201 TCEAL9Q9UHQ7 104 aa11.54□□□□□ -0.56
PTPRT-207ENST00000373201 GTF2E1P29083 439 aaPredicted RBP11.53□□□□□ -0.56
PTPRT-207ENST00000373201 ERCC6Q03468 1493 aa11.53□□□□□ -0.56
PTPRT-207ENST00000373201 CWC22Q9HCG8 908 aaKnown RBP11.52□□□□□ -0.56
PTPRT-207ENST00000373201 CARD11Q9BXL7 1154 aa11.52□□□□□ -0.56
PTPRT-207ENST00000373201 HDGFP51858 240 aaKnown RBP11.52□□□□□ -0.57
PTPRT-207ENST00000373201 STK26Q9P289 416 aa11.52□□□□□ -0.57
PTPRT-207ENST00000373201 MS4A1P11836 297 aa11.5□□□□□ -0.57
PTPRT-207ENST00000373201 RAD21O60216 631 aa11.5□□□□□ -0.57
PTPRT-207ENST00000373201 MEX3CQ5U5Q3 659 aaKnown RBP11.5□□□□□ -0.57
PTPRT-207ENST00000373201 TOMM22Q9NS69 142 aa11.49□□□□□ -0.57
PTPRT-207ENST00000373201 DCAF8L1A6NGE4 600 aa11.49□□□□□ -0.57
PTPRT-207ENST00000373201 CTDP1Q9Y5B0 961 aaPredicted RBP11.49□□□□□ -0.57
PTPRT-207ENST00000373201 GPATCH3Q96I76 525 aa11.49□□□□□ -0.57
PTPRT-207ENST00000373201 GOLGA6L1Q8N7Z2 621 aa11.48□□□□□ -0.57
PTPRT-207ENST00000373201 TRIM34Q9BYJ4 488 aa11.48□□□□□ -0.57
PTPRT-207ENST00000373201 PES1O00541 588 aaKnown RBP11.48□□□□□ -0.57
PTPRT-207ENST00000373201 TPM4P67936 248 aa11.48□□□□□ -0.57
PTPRT-207ENST00000373201 KANK1Q14678 1352 aa11.47□□□□□ -0.57
PTPRT-207ENST00000373201 CFDP1Q9UEE9 299 aaPredicted RBP11.47□□□□□ -0.57
PTPRT-207ENST00000373201 PATL2C9JE40 543 aaKnown RBP11.46□□□□□ -0.57
PTPRT-207ENST00000373201 CCDC34Q96HJ3 373 aa11.46□□□□□ -0.58
PTPRT-207ENST00000373201 FBXW7Q969H0 707 aa11.45□□□□□ -0.58
PTPRT-207ENST00000373201 SUPT16HQ9Y5B9 1047 aaKnown RBP11.44□□□□□ -0.58
PTPRT-207ENST00000373201 TRIM6-TRIM34B2RNG4 842 aa11.43□□□□□ -0.58
PTPRT-207ENST00000373201 TNNT3P45378 269 aaPredicted RBP11.43□□□□□ -0.58
PTPRT-207ENST00000373201 MORC1Q86VD1 984 aa11.43□□□□□ -0.58
PTPRT-207ENST00000373201 HTATSF1O43719 755 aaKnown RBP11.42□□□□□ -0.58
PTPRT-207ENST00000373201 RSF1Q96T23 1441 aaPredicted RBP11.42□□□□□ -0.58
PTPRT-207ENST00000373201 B4GALNT3Q6L9W6 998 aa11.41□□□□□ -0.58
PTPRT-207ENST00000373201 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.41□□□□□ -0.58
PTPRT-207ENST00000373201 LTV1Q96GA3 475 aaPredicted RBP11.4□□□□□ -0.58
PTPRT-207ENST00000373201 TPM3P06753 285 aa11.4□□□□□ -0.58
PTPRT-207ENST00000373201 SAMD1Q6SPF0 538 aaPredicted RBP11.4□□□□□ -0.58
PTPRT-207ENST00000373201 TPD52L1Q16890 204 aaPredicted RBP11.4□□□□□ -0.59
PTPRT-207ENST00000373201 HDGFL2Q7Z4V5 671 aaPredicted RBP11.39□□□□□ -0.59
PTPRT-207ENST00000373201 ZCCHC6Q5VYS8 1495 aaKnown RBP11.39□□□□□ -0.59
PTPRT-207ENST00000373201 EVA1CP58658 441 aa11.39□□□□□ -0.59
PTPRT-207ENST00000373201 MIER1Q8N108 512 aa11.39□□□□□ -0.59
PTPRT-207ENST00000373201 NOL8Q76FK4 1167 aaKnown RBP11.38□□□□□ -0.59
PTPRT-207ENST00000373201 SPAG9O60271 1321 aaKnown RBP11.38□□□□□ -0.59
PTPRT-207ENST00000373201 GGT6Q6P531 493 aa11.38□□□□□ -0.59
PTPRT-207ENST00000373201 NOL10Q9BSC4 688 aaKnown RBP11.37□□□□□ -0.59
PTPRT-207ENST00000373201 ITPRIPQ8IWB1 547 aa11.37□□□□□ -0.59
PTPRT-207ENST00000373201 EIF4G1Q04637 1599 aaKnown RBP11.37□□□□□ -0.59
PTPRT-207ENST00000373201 TMF1P82094 1093 aa11.37□□□□□ -0.59
PTPRT-207ENST00000373201 STK31Q9BXU1 1019 aa11.37□□□□□ -0.59
PTPRT-207ENST00000373201 GZF1Q9H116 711 aaPredicted RBP11.36□□□□□ -0.59
PTPRT-207ENST00000373201 AKAP17AQ02040 695 aaKnown RBP11.35□□□□□ -0.59
PTPRT-207ENST00000373201 SLC4A10Q6U841 1118 aa11.35□□□□□ -0.59
PTPRT-207ENST00000373201 CFAP44Q96MT7 982 aa11.35□□□□□ -0.59
PTPRT-207ENST00000373201 IPO8O15397 1037 aaKnown RBP11.35□□□□□ -0.59
PTPRT-207ENST00000373201 CCDC43Q96MW1 224 aaKnown RBP11.35□□□□□ -0.59
PTPRT-207ENST00000373201 NOP58Q9Y2X3 529 aaKnown RBP11.35□□□□□ -0.59
PTPRT-207ENST00000373201 SF3A1Q15459 793 aaKnown RBP11.34□□□□□ -0.59
PTPRT-207ENST00000373201 TSR1Q2NL82 804 aaKnown RBP11.34□□□□□ -0.59
PTPRT-207ENST00000373201 CCAR2Q8N163 923 aaKnown RBP11.34□□□□□ -0.59
PTPRT-207ENST00000373201 PAF1Q8N7H5 531 aa11.34□□□□□ -0.59
PTPRT-207ENST00000373201 USP35Q9P2H5 1018 aa11.34□□□□□ -0.59
PTPRT-207ENST00000373201 DCAF11Q8TEB1 546 aa11.34□□□□□ -0.59
PTPRT-207ENST00000373201 SYAP1Q96A49 352 aaPredicted RBP11.33□□□□□ -0.59
PTPRT-207ENST00000373201 SYTL4Q96C24 671 aaPredicted RBP11.33□□□□□ -0.6
PTPRT-207ENST00000373201 GBP4Q96PP9 640 aa11.33□□□□□ -0.6
PTPRT-207ENST00000373201 DHX16O60231 1041 aaKnown RBP11.33□□□□□ -0.6
PTPRT-207ENST00000373201 NUTM2FA1L443 756 aa11.32□□□□□ -0.6
PTPRT-207ENST00000373201 TPM2P07951 284 aa11.32□□□□□ -0.6
PTPRT-207ENST00000373201 AMOTL1Q8IY63 956 aa11.32□□□□□ -0.6
PTPRT-207ENST00000373201 CALD1Q05682 793 aaKnown RBP11.32□□□□□ -0.6
PTPRT-207ENST00000373201 U2AF1L5P0DN76 240 aaPredicted RBP11.31□□□□□ -0.6
PTPRT-207ENST00000373201 U2AF1Q01081 240 aaKnown RBP eCLIP11.31□□□□□ -0.6
PTPRT-207ENST00000373201 VPS37DQ86XT2 251 aa11.31□□□□□ -0.6
PTPRT-207ENST00000373201 FOXD4L5Q5VV16 416 aaPredicted RBP11.31□□□□□ -0.6
PTPRT-207ENST00000373201 FOXD4L4Q8WXT5 416 aaPredicted RBP11.31□□□□□ -0.6
PTPRT-207ENST00000373201 EID1Q9Y6B2 187 aa11.31□□□□□ -0.6
PTPRT-207ENST00000373201 NGDNQ8NEJ9 315 aaKnown RBP11.31□□□□□ -0.6
PTPRT-207ENST00000373201 PCMTD1Q96MG8 357 aaPredicted RBP11.31□□□□□ -0.6
PTPRT-207ENST00000373201 H3BQV1 296 aa11.3□□□□□ -0.6
PTPRT-207ENST00000373201 SETQ01105 290 aaPredicted RBP11.3□□□□□ -0.6
PTPRT-207ENST00000373201 IFFO2Q5TF58 517 aa11.3□□□□□ -0.6
PTPRT-207ENST00000373201 KIF16BQ96L93 1317 aa11.3□□□□□ -0.6
PTPRT-207ENST00000373201 NGEFQ8N5V2 710 aa11.3□□□□□ -0.6
PTPRT-207ENST00000373201 CCAR1Q8IX12 1150 aaKnown RBP11.3□□□□□ -0.6
PTPRT-207ENST00000373201 PPP1R1BQ9UD71 204 aaPredicted RBP11.29□□□□□ -0.6
PTPRT-207ENST00000373201 AMPHP49418 695 aa11.29□□□□□ -0.6
PTPRT-207ENST00000373201 RRP12Q5JTH9 1297 aaKnown RBP11.29□□□□□ -0.6
PTPRT-207ENST00000373201 FOXD4L1Q9NU39 408 aa11.29□□□□□ -0.6
PTPRT-207ENST00000373201 CLIP1P30622 1438 aa11.29□□□□□ -0.6
PTPRT-207ENST00000373201 VSIG10Q8N0Z9 540 aa11.29□□□□□ -0.6
PTPRT-207ENST00000373201 CCDC180Q9P1Z9 1646 aa11.29□□□□□ -0.6
PTPRT-207ENST00000373201 CSPP1Q1MSJ5 1256 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms