RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 TCOF1Q13428 1488 aaKnown RBP20.37■□□□□ 0.85
COL9A2-202ENST00000372748 MPHOSPH9Q99550 1183 aa20.36■□□□□ 0.85
COL9A2-202ENST00000372748 EIF4G2P78344 907 aaKnown RBP eCLIP20.35■□□□□ 0.85
COL9A2-202ENST00000372748 ZNF644Q9H582 1327 aaPredicted RBP20.34■□□□□ 0.85
COL9A2-202ENST00000372748 C11orf95C9JLR9 678 aaPredicted RBP20.34■□□□□ 0.85
COL9A2-202ENST00000372748 FBLN2P98095 1184 aa20.33■□□□□ 0.85
COL9A2-202ENST00000372748 MRS2Q9HD23 443 aa20.33■□□□□ 0.84
COL9A2-202ENST00000372748 WDR62O43379 1518 aa20.33■□□□□ 0.84
COL9A2-202ENST00000372748 L3MBTL2Q969R5 705 aa20.31■□□□□ 0.84
COL9A2-202ENST00000372748 GCC2Q8IWJ2 1684 aa20.31■□□□□ 0.84
COL9A2-202ENST00000372748 ERICH6BQ5W0A0 696 aa20.3■□□□□ 0.84
COL9A2-202ENST00000372748 PRKRIP1Q9H875 184 aaPredicted RBP20.3■□□□□ 0.84
COL9A2-202ENST00000372748 MIA2Q96PC5 1412 aa20.3■□□□□ 0.84
COL9A2-202ENST00000372748 CNTLNQ9NXG0 1405 aa20.28■□□□□ 0.84
COL9A2-202ENST00000372748 CNGB1Q14028 1251 aaPredicted RBP20.28■□□□□ 0.84
COL9A2-202ENST00000372748 AKNAQ7Z591 1439 aa20.24■□□□□ 0.83
COL9A2-202ENST00000372748 DISP1Q96F81 1524 aa20.23■□□□□ 0.83
COL9A2-202ENST00000372748 DAPK1P53355 1430 aa20.23■□□□□ 0.83
COL9A2-202ENST00000372748 ZBED9Q6R2W3 1325 aa20.23■□□□□ 0.83
COL9A2-202ENST00000372748 DEKP35659 375 aaKnown RBP20.22■□□□□ 0.83
COL9A2-202ENST00000372748 CCDC7Q96M83 1385 aa20.22■□□□□ 0.83
COL9A2-202ENST00000372748 IFT140Q96RY7 1462 aa20.22■□□□□ 0.83
COL9A2-202ENST00000372748 KIAA0586Q9BVV6 1533 aa20.21■□□□□ 0.83
COL9A2-202ENST00000372748 NUP153P49790 1475 aaKnown RBP20.21■□□□□ 0.83
COL9A2-202ENST00000372748 SLC4A1APQ9BWU0 796 aaKnown RBP20.21■□□□□ 0.83
COL9A2-202ENST00000372748 ABCC5O15440 1437 aa20.21■□□□□ 0.83
COL9A2-202ENST00000372748 SENP3-EIF4A1A0A087X0R7 540 aa20.21■□□□□ 0.83
COL9A2-202ENST00000372748 NBR1Q14596 966 aa20.21■□□□□ 0.83
COL9A2-202ENST00000372748 KIAA0556O60303 1618 aa20.21■□□□□ 0.83
COL9A2-202ENST00000372748 NBPF8Q3BBV2 869 aa20.2■□□□□ 0.82
COL9A2-202ENST00000372748 ZNF777Q9ULD5 760 aaPredicted RBP20.2■□□□□ 0.82
COL9A2-202ENST00000372748 PAK3O75914 559 aaPredicted RBP20.18■□□□□ 0.82
COL9A2-202ENST00000372748 NCOA1Q15788 1441 aa20.17■□□□□ 0.82
COL9A2-202ENST00000372748 PRG4Q92954 1404 aaPredicted RBP20.17■□□□□ 0.82
COL9A2-202ENST00000372748 ANKRD30BQ9BXX2 1392 aa20.17■□□□□ 0.82
COL9A2-202ENST00000372748 NOP58Q9Y2X3 529 aaKnown RBP20.17■□□□□ 0.82
COL9A2-202ENST00000372748 CHMP7Q8WUX9 453 aaPredicted RBP20.16■□□□□ 0.82
COL9A2-202ENST00000372748 GRIN2AQ12879 1464 aa20.16■□□□□ 0.82
COL9A2-202ENST00000372748 CFDP1Q9UEE9 299 aaPredicted RBP20.15■□□□□ 0.82
COL9A2-202ENST00000372748 RAPGEF6Q8TEU7 1601 aa20.14■□□□□ 0.82
COL9A2-202ENST00000372748 KIF7Q2M1P5 1343 aa20.14■□□□□ 0.82
COL9A2-202ENST00000372748 ROCK1Q13464 1354 aa20.14■□□□□ 0.81
COL9A2-202ENST00000372748 DNMT1P26358 1616 aaKnown RBP20.13■□□□□ 0.81
COL9A2-202ENST00000372748 POLR3GLQ9BT43 218 aa20.12■□□□□ 0.81
COL9A2-202ENST00000372748 EIF4G3O43432 1585 aaKnown RBP20.12■□□□□ 0.81
COL9A2-202ENST00000372748 PLB1Q6P1J6 1458 aa20.11■□□□□ 0.81
COL9A2-202ENST00000372748 MYT1LQ9UL68 1186 aa20.11■□□□□ 0.81
COL9A2-202ENST00000372748 RPRD2Q5VT52 1461 aaKnown RBP20.11■□□□□ 0.81
COL9A2-202ENST00000372748 ZNF326Q5BKZ1 582 aaKnown RBP20.09■□□□□ 0.81
COL9A2-202ENST00000372748 CCDC136Q96JN2 1154 aa20.08■□□□□ 0.8
COL9A2-202ENST00000372748 TROQ12816 1431 aaPredicted RBP20.07■□□□□ 0.8
COL9A2-202ENST00000372748 CAMSAP2Q08AD1 1489 aa20.06■□□□□ 0.8
COL9A2-202ENST00000372748 TEX14Q8IWB6 1497 aa20.06■□□□□ 0.8
COL9A2-202ENST00000372748 JPH4Q96JJ6 628 aa20.04■□□□□ 0.8
COL9A2-202ENST00000372748 GPATCH8Q9UKJ3 1502 aaKnown RBP20.03■□□□□ 0.8
COL9A2-202ENST00000372748 CEP170Q5SW79 1584 aa20.03■□□□□ 0.8
COL9A2-202ENST00000372748 KIF14Q15058 1648 aa20.03■□□□□ 0.8
COL9A2-202ENST00000372748 NUDCQ9Y266 331 aa20.02■□□□□ 0.8
COL9A2-202ENST00000372748 PZPP20742 1482 aa20.02■□□□□ 0.8
COL9A2-202ENST00000372748 PKD2Q13563 968 aa20.02■□□□□ 0.8
COL9A2-202ENST00000372748 SMG6Q86US8 1419 aaKnown RBP20.01■□□□□ 0.79
COL9A2-202ENST00000372748 SPATA31E1Q6ZUB1 1445 aa20.01■□□□□ 0.79
COL9A2-202ENST00000372748 ANP32AP39687 249 aaKnown RBP20.01■□□□□ 0.79
COL9A2-202ENST00000372748 IPO9Q96P70 1041 aaKnown RBP19.98■□□□□ 0.79
COL9A2-202ENST00000372748 SYNJ2O15056 1496 aa19.98■□□□□ 0.79
COL9A2-202ENST00000372748 MAGI1Q96QZ7 1491 aaPredicted RBP19.97■□□□□ 0.79
COL9A2-202ENST00000372748 PLEKHD1A6NEE1 506 aa19.97■□□□□ 0.79
COL9A2-202ENST00000372748 CARMIL2Q6F5E8 1435 aa19.96■□□□□ 0.79
COL9A2-202ENST00000372748 DHX29Q7Z478 1369 aaKnown RBP19.95■□□□□ 0.78
COL9A2-202ENST00000372748 ZBTB47Q9UFB7 747 aaPredicted RBP19.95■□□□□ 0.78
COL9A2-202ENST00000372748 ANKRD30AQ9BXX3 1397 aa19.94■□□□□ 0.78
COL9A2-202ENST00000372748 KIAA1107Q9UPP5 1409 aa19.94■□□□□ 0.78
COL9A2-202ENST00000372748 ITSN2Q9NZM3 1697 aa19.94■□□□□ 0.78
COL9A2-202ENST00000372748 RNF123Q5XPI4 1314 aa19.93■□□□□ 0.78
COL9A2-202ENST00000372748 ANKRD50Q9ULJ7 1429 aa19.92■□□□□ 0.78
COL9A2-202ENST00000372748 RTL5Q5HYW3 569 aaPredicted RBP19.92■□□□□ 0.78
COL9A2-202ENST00000372748 ADGBQ8N7X0 1667 aa19.91■□□□□ 0.78
COL9A2-202ENST00000372748 NUP155O75694 1391 aa19.9■□□□□ 0.78
COL9A2-202ENST00000372748 NPM2Q86SE8 214 aaKnown RBP19.9■□□□□ 0.78
COL9A2-202ENST00000372748 USP47Q96K76 1375 aa19.9■□□□□ 0.78
COL9A2-202ENST00000372748 TMC1Q8TDI8 760 aa19.9■□□□□ 0.78
COL9A2-202ENST00000372748 KDM2AQ9Y2K7 1162 aa19.9■□□□□ 0.78
COL9A2-202ENST00000372748 HNRNPMP52272 730 aaKnown RBP eCLIP19.89■□□□□ 0.78
COL9A2-202ENST00000372748 PNISRQ8TF01 805 aaKnown RBP19.89■□□□□ 0.77
COL9A2-202ENST00000372748 ADGRL2O95490 1459 aa19.88■□□□□ 0.77
COL9A2-202ENST00000372748 NUP160Q12769 1436 aa19.87■□□□□ 0.77
COL9A2-202ENST00000372748 ADCY10Q96PN6 1610 aa19.87■□□□□ 0.77
COL9A2-202ENST00000372748 TSPY4P0CV99 314 aa19.87■□□□□ 0.77
COL9A2-202ENST00000372748 TSPY10P0CW01 314 aa19.87■□□□□ 0.77
COL9A2-202ENST00000372748 ATP10BO94823 1461 aa19.87■□□□□ 0.77
COL9A2-202ENST00000372748 CROCC2H7BZ55 1655 aa19.86■□□□□ 0.77
COL9A2-202ENST00000372748 SALL2Q9Y467 1007 aaPredicted RBP19.85■□□□□ 0.77
COL9A2-202ENST00000372748 MBD5Q9P267 1494 aa19.85■□□□□ 0.77
COL9A2-202ENST00000372748 C9orf84Q5VXU9 1444 aa19.85■□□□□ 0.77
COL9A2-202ENST00000372748 BCORL1Q5H9F3 1711 aa19.84■□□□□ 0.77
COL9A2-202ENST00000372748 CDC42BPAQ5VT25 1732 aa19.83■□□□□ 0.77
COL9A2-202ENST00000372748 CARD11Q9BXL7 1154 aa19.83■□□□□ 0.76
COL9A2-202ENST00000372748 EXOC6Q8TAG9 804 aa19.82■□□□□ 0.76
COL9A2-202ENST00000372748 POLR1AO95602 1720 aaPredicted RBP19.82■□□□□ 0.76
COL9A2-202ENST00000372748 ABCC10Q5T3U5 1492 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms