RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 CFDP1Q9UEE9 299 aaPredicted RBP24.42■■□□□ 1.5
C9orf78-201ENST00000372447 TEX14Q8IWB6 1497 aa24.41■■□□□ 1.5
C9orf78-201ENST00000372447 FANCAO15360 1455 aa24.4■■□□□ 1.5
C9orf78-201ENST00000372447 ARAP3Q8WWN8 1544 aa24.4■■□□□ 1.5
C9orf78-201ENST00000372447 PREX2Q70Z35 1606 aa24.4■■□□□ 1.5
C9orf78-201ENST00000372447 CDC42BPBQ9Y5S2 1711 aa24.4■■□□□ 1.5
C9orf78-201ENST00000372447 ARHGAP5Q13017 1502 aa24.39■■□□□ 1.5
C9orf78-201ENST00000372447 ZNF777Q9ULD5 760 aaPredicted RBP24.37■■□□□ 1.49
C9orf78-201ENST00000372447 MYOM3Q5VTT5 1437 aa24.37■■□□□ 1.49
C9orf78-201ENST00000372447 NEO1Q92859 1461 aa24.36■■□□□ 1.49
C9orf78-201ENST00000372447 AKNAQ7Z591 1439 aa24.35■■□□□ 1.49
C9orf78-201ENST00000372447 ITSN2Q9NZM3 1697 aa24.33■■□□□ 1.49
C9orf78-201ENST00000372447 ZNF644Q9H582 1327 aaPredicted RBP24.33■■□□□ 1.49
C9orf78-201ENST00000372447 ZEB1P37275 1124 aaPredicted RBP24.3■■□□□ 1.48
C9orf78-201ENST00000372447 MIA2Q96PC5 1412 aa24.3■■□□□ 1.48
C9orf78-201ENST00000372447 COL17A1Q9UMD9 1497 aaPredicted RBP24.29■■□□□ 1.48
C9orf78-201ENST00000372447 CFAP74Q9C0B2 1584 aa24.29■■□□□ 1.48
C9orf78-201ENST00000372447 ADGRL1O94910 1474 aa24.28■■□□□ 1.48
C9orf78-201ENST00000372447 FGD6Q6ZV73 1430 aa24.27■■□□□ 1.48
C9orf78-201ENST00000372447 SAMD9LQ8IVG5 1584 aa24.27■■□□□ 1.48
C9orf78-201ENST00000372447 SCAPERQ9BY12 1400 aa24.27■■□□□ 1.48
C9orf78-201ENST00000372447 HNRNPMP52272 730 aaKnown RBP eCLIP24.25■■□□□ 1.47
C9orf78-201ENST00000372447 ARHGEF12Q9NZN5 1544 aa24.24■■□□□ 1.47
C9orf78-201ENST00000372447 RAPGEF3O95398 923 aa24.24■■□□□ 1.47
C9orf78-201ENST00000372447 CAMSAP2Q08AD1 1489 aa24.23■■□□□ 1.47
C9orf78-201ENST00000372447 ABCC1P33527 1531 aa24.23■■□□□ 1.47
C9orf78-201ENST00000372447 KIAA1107Q9UPP5 1409 aa24.22■■□□□ 1.47
C9orf78-201ENST00000372447 DENND4BO75064 1496 aaPredicted RBP24.21■■□□□ 1.47
C9orf78-201ENST00000372447 PLEKHH2Q8IVE3 1493 aa24.21■■□□□ 1.47
C9orf78-201ENST00000372447 KDM6BO15054 1643 aa24.2■■□□□ 1.46
C9orf78-201ENST00000372447 SYCP2Q9BX26 1530 aa24.2■■□□□ 1.46
C9orf78-201ENST00000372447 PTPN23Q9H3S7 1636 aa24.2■■□□□ 1.46
C9orf78-201ENST00000372447 AFAP1Q8N556 730 aa24.19■■□□□ 1.46
C9orf78-201ENST00000372447 TRAPPC8Q9Y2L5 1435 aa24.18■■□□□ 1.46
C9orf78-201ENST00000372447 TCOF1Q13428 1488 aaKnown RBP24.18■■□□□ 1.46
C9orf78-201ENST00000372447 FAM50AQ14320 339 aaKnown RBP24.18■■□□□ 1.46
C9orf78-201ENST00000372447 MBD5Q9P267 1494 aa24.18■■□□□ 1.46
C9orf78-201ENST00000372447 POGZQ7Z3K3 1410 aa24.17■■□□□ 1.46
C9orf78-201ENST00000372447 RRBP1Q9P2E9 1410 aaKnown RBP24.15■■□□□ 1.46
C9orf78-201ENST00000372447 ZNF518AQ6AHZ1 1483 aa24.13■■□□□ 1.45
C9orf78-201ENST00000372447 RSPH4AQ5TD94 716 aa24.13■■□□□ 1.45
C9orf78-201ENST00000372447 FRMPD1Q5SYB0 1578 aa24.13■■□□□ 1.45
C9orf78-201ENST00000372447 RICTORQ6R327 1708 aa24.12■■□□□ 1.45
C9orf78-201ENST00000372447 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.09■■□□□ 1.45
C9orf78-201ENST00000372447 ARHGEF5Q12774 1597 aa24.08■■□□□ 1.45
C9orf78-201ENST00000372447 CCDC141Q6ZP82 1450 aa24.08■■□□□ 1.45
C9orf78-201ENST00000372447 KDM5CP41229 1560 aa24.07■■□□□ 1.44
C9orf78-201ENST00000372447 ABCC5O15440 1437 aa24.06■■□□□ 1.44
C9orf78-201ENST00000372447 SPAG9O60271 1321 aaKnown RBP24.05■■□□□ 1.44
C9orf78-201ENST00000372447 TSPY4P0CV99 314 aa24.05■■□□□ 1.44
C9orf78-201ENST00000372447 TSPY10P0CW01 314 aa24.05■■□□□ 1.44
C9orf78-201ENST00000372447 CCER1Q8TC90 406 aaPredicted RBP24.05■■□□□ 1.44
C9orf78-201ENST00000372447 DAPK1P53355 1430 aa24.04■■□□□ 1.44
C9orf78-201ENST00000372447 MYT1LQ9UL68 1186 aa24.04■■□□□ 1.44
C9orf78-201ENST00000372447 ZMYM4Q5VZL5 1548 aa24.03■■□□□ 1.44
C9orf78-201ENST00000372447 MLH3Q9UHC1 1453 aa24.02■■□□□ 1.44
C9orf78-201ENST00000372447 DNMT1P26358 1616 aaKnown RBP24.02■■□□□ 1.44
C9orf78-201ENST00000372447 ITGAEP38570 1179 aa24.01■■□□□ 1.43
C9orf78-201ENST00000372447 YEATS2Q9ULM3 1422 aa24■■□□□ 1.43
C9orf78-201ENST00000372447 MAGI2Q86UL8 1455 aa24■■□□□ 1.43
C9orf78-201ENST00000372447 PTPRKQ15262 1439 aa23.99■■□□□ 1.43
C9orf78-201ENST00000372447 CHIC2Q9UKJ5 165 aa23.99■■□□□ 1.43
C9orf78-201ENST00000372447 HECW2Q9P2P5 1572 aa23.99■■□□□ 1.43
C9orf78-201ENST00000372447 RTEL1-TNFRSF6BF6WH68 1400 aa23.99■■□□□ 1.43
C9orf78-201ENST00000372447 C9orf84Q5VXU9 1444 aa23.98■■□□□ 1.43
C9orf78-201ENST00000372447 ATP7AQ04656 1500 aa23.96■■□□□ 1.43
C9orf78-201ENST00000372447 KIDINS220Q9ULH0 1771 aa23.96■■□□□ 1.43
C9orf78-201ENST00000372447 ZFYVE16Q7Z3T8 1539 aa23.96■■□□□ 1.43
C9orf78-201ENST00000372447 SHANK2Q9UPX8 1470 aa23.95■■□□□ 1.43
C9orf78-201ENST00000372447 INO80Q9ULG1 1556 aaPredicted RBP23.95■■□□□ 1.42
C9orf78-201ENST00000372447 CROCC2H7BZ55 1655 aa23.94■■□□□ 1.42
C9orf78-201ENST00000372447 MAST1Q9Y2H9 1570 aa23.93■■□□□ 1.42
C9orf78-201ENST00000372447 ARHGEF40Q8TER5 1519 aa23.91■■□□□ 1.42
C9orf78-201ENST00000372447 ABCA6Q8N139 1617 aa23.9■■□□□ 1.42
C9orf78-201ENST00000372447 ATP10AO60312 1499 aa23.9■■□□□ 1.42
C9orf78-201ENST00000372447 DIP2CQ9Y2E4 1556 aa23.89■■□□□ 1.42
C9orf78-201ENST00000372447 RRP7BPQ9NSQ0 103 aa23.89■■□□□ 1.42
C9orf78-201ENST00000372447 NCOA1Q15788 1441 aa23.88■■□□□ 1.41
C9orf78-201ENST00000372447 ANKRD30AQ9BXX3 1397 aa23.88■■□□□ 1.41
C9orf78-201ENST00000372447 ADGRL2O95490 1459 aa23.87■■□□□ 1.41
C9orf78-201ENST00000372447 ROCK1Q13464 1354 aa23.84■■□□□ 1.41
C9orf78-201ENST00000372447 KIF15Q9NS87 1388 aa23.84■■□□□ 1.41
C9orf78-201ENST00000372447 PLXNC1O60486 1568 aa23.84■■□□□ 1.41
C9orf78-201ENST00000372447 A2MP01023 1474 aa23.83■■□□□ 1.41
C9orf78-201ENST00000372447 DHX29Q7Z478 1369 aaKnown RBP23.83■■□□□ 1.4
C9orf78-201ENST00000372447 ADGBQ8N7X0 1667 aa23.81■■□□□ 1.4
C9orf78-201ENST00000372447 REREQ9P2R6 1566 aa23.79■■□□□ 1.4
C9orf78-201ENST00000372447 ARID4BQ4LE39 1312 aaPredicted RBP23.78■■□□□ 1.4
C9orf78-201ENST00000372447 SIGLEC1Q9BZZ2 1709 aa23.78■■□□□ 1.4
C9orf78-201ENST00000372447 DUOX2Q9NRD8 1548 aa23.78■■□□□ 1.4
C9orf78-201ENST00000372447 AGLP35573 1532 aa23.73■■□□□ 1.39
C9orf78-201ENST00000372447 KIF3BO15066 747 aa23.73■■□□□ 1.39
C9orf78-201ENST00000372447 NAIPQ13075 1403 aa23.73■■□□□ 1.39
C9orf78-201ENST00000372447 ANKRD50Q9ULJ7 1429 aa23.73■■□□□ 1.39
C9orf78-201ENST00000372447 HFM1A2PYH4 1435 aa23.72■■□□□ 1.39
C9orf78-201ENST00000372447 ERBINQ96RT1 1412 aa23.72■■□□□ 1.39
C9orf78-201ENST00000372447 MLECQ14165 292 aa23.71■■□□□ 1.39
C9orf78-201ENST00000372447 GGT6Q6P531 493 aa23.68■■□□□ 1.38
C9orf78-201ENST00000372447 EIF2AK4Q9P2K8 1649 aaKnown RBP23.64■■□□□ 1.38
C9orf78-201ENST00000372447 BCORL1Q5H9F3 1711 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms