RNA–Protein interactions for RNA: ENST00000372274.5

TMEM254-202, Transcript of transmembrane protein 254, humanhuman

TSL 2 BASIC

Gene TMEM254, Length 481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-202ENST00000372274 CCDC18Q5T9S5 1454 aa18.52■□□□□ 0.56
TMEM254-202ENST00000372274 BCORL1Q5H9F3 1711 aa18.52■□□□□ 0.55
TMEM254-202ENST00000372274 YEATS2Q9ULM3 1422 aa18.51■□□□□ 0.55
TMEM254-202ENST00000372274 ZFYVE16Q7Z3T8 1539 aa18.51■□□□□ 0.55
TMEM254-202ENST00000372274 LRRIQ1Q96JM4 1722 aa18.51■□□□□ 0.55
TMEM254-202ENST00000372274 MYO5CQ9NQX4 1742 aa18.5■□□□□ 0.55
TMEM254-202ENST00000372274 PCF11O94913 1555 aaKnown RBP18.5■□□□□ 0.55
TMEM254-202ENST00000372274 FYCO1Q9BQS8 1478 aa18.47■□□□□ 0.55
TMEM254-202ENST00000372274 ARHGAP5Q13017 1502 aa18.47■□□□□ 0.55
TMEM254-202ENST00000372274 MADDQ8WXG6 1647 aa18.45■□□□□ 0.54
TMEM254-202ENST00000372274 AFAP1Q8N556 730 aa18.44■□□□□ 0.54
TMEM254-202ENST00000372274 ATP10AO60312 1499 aa18.44■□□□□ 0.54
TMEM254-202ENST00000372274 ZNF518AQ6AHZ1 1483 aa18.44■□□□□ 0.54
TMEM254-202ENST00000372274 C9orf84Q5VXU9 1444 aa18.4■□□□□ 0.54
TMEM254-202ENST00000372274 MLECQ14165 292 aa18.4■□□□□ 0.54
TMEM254-202ENST00000372274 SIGLEC1Q9BZZ2 1709 aa18.4■□□□□ 0.54
TMEM254-202ENST00000372274 KDM5CP41229 1560 aa18.39■□□□□ 0.53
TMEM254-202ENST00000372274 CDC42BPBQ9Y5S2 1711 aa18.39■□□□□ 0.53
TMEM254-202ENST00000372274 PREX2Q70Z35 1606 aa18.38■□□□□ 0.53
TMEM254-202ENST00000372274 RIMS1Q86UR5 1692 aaKnown RBP18.38■□□□□ 0.53
TMEM254-202ENST00000372274 MYT1LQ9UL68 1186 aa18.37■□□□□ 0.53
TMEM254-202ENST00000372274 ARHGEF12Q9NZN5 1544 aa18.36■□□□□ 0.53
TMEM254-202ENST00000372274 MLH3Q9UHC1 1453 aa18.36■□□□□ 0.53
TMEM254-202ENST00000372274 ABCC1P33527 1531 aa18.35■□□□□ 0.53
TMEM254-202ENST00000372274 TRAPPC8Q9Y2L5 1435 aa18.35■□□□□ 0.53
TMEM254-202ENST00000372274 GPATCH8Q9UKJ3 1502 aaKnown RBP18.33■□□□□ 0.53
TMEM254-202ENST00000372274 LMTK3Q96Q04 1460 aa18.33■□□□□ 0.53
TMEM254-202ENST00000372274 PLPPR3Q6T4P5 718 aa18.33■□□□□ 0.52
TMEM254-202ENST00000372274 ILDR1Q86SU0 546 aaPredicted RBP18.33■□□□□ 0.52
TMEM254-202ENST00000372274 ZNF777Q9ULD5 760 aaPredicted RBP18.32■□□□□ 0.52
TMEM254-202ENST00000372274 CEP162Q5TB80 1403 aa18.32■□□□□ 0.52
TMEM254-202ENST00000372274 CDC42BPAQ5VT25 1732 aa18.31■□□□□ 0.52
TMEM254-202ENST00000372274 MTUS2Q5JR59 1369 aa18.3■□□□□ 0.52
TMEM254-202ENST00000372274 DIP2CQ9Y2E4 1556 aa18.3■□□□□ 0.52
TMEM254-202ENST00000372274 REREQ9P2R6 1566 aa18.3■□□□□ 0.52
TMEM254-202ENST00000372274 ITSN2Q9NZM3 1697 aa18.29■□□□□ 0.52
TMEM254-202ENST00000372274 CCNB3Q8WWL7 1395 aa18.29■□□□□ 0.52
TMEM254-202ENST00000372274 FER1L4A9Z1Z3 1794 aa18.28■□□□□ 0.52
TMEM254-202ENST00000372274 CFDP1Q9UEE9 299 aaPredicted RBP18.28■□□□□ 0.52
TMEM254-202ENST00000372274 HNRNPMP52272 730 aaKnown RBP eCLIP18.27■□□□□ 0.52
TMEM254-202ENST00000372274 ABCA6Q8N139 1617 aa18.27■□□□□ 0.51
TMEM254-202ENST00000372274 SAMD9LQ8IVG5 1584 aa18.26■□□□□ 0.51
TMEM254-202ENST00000372274 KIAA1107Q9UPP5 1409 aa18.26■□□□□ 0.51
TMEM254-202ENST00000372274 AGLP35573 1532 aa18.26■□□□□ 0.51
TMEM254-202ENST00000372274 PLEKHH2Q8IVE3 1493 aa18.25■□□□□ 0.51
TMEM254-202ENST00000372274 CEBPAP49715 358 aaPredicted RBP18.24■□□□□ 0.51
TMEM254-202ENST00000372274 HSPA2P54652 639 aa18.24■□□□□ 0.51
TMEM254-202ENST00000372274 SPAG9O60271 1321 aaKnown RBP18.23■□□□□ 0.51
TMEM254-202ENST00000372274 SYCP2Q9BX26 1530 aa18.23■□□□□ 0.51
TMEM254-202ENST00000372274 KIDINS220Q9ULH0 1771 aa18.23■□□□□ 0.51
TMEM254-202ENST00000372274 EHBP1L1Q8N3D4 1523 aa18.22■□□□□ 0.51
TMEM254-202ENST00000372274 LOC105371045A0A1W2PR82 267 aa18.21■□□□□ 0.51
TMEM254-202ENST00000372274 ESF1Q9H501 851 aaKnown RBP18.19■□□□□ 0.5
TMEM254-202ENST00000372274 TIAM1Q13009 1591 aa18.17■□□□□ 0.5
TMEM254-202ENST00000372274 ZNF644Q9H582 1327 aaPredicted RBP18.17■□□□□ 0.5
TMEM254-202ENST00000372274 ATP7AQ04656 1500 aa18.15■□□□□ 0.5
TMEM254-202ENST00000372274 CNTLNQ9NXG0 1405 aa18.15■□□□□ 0.5
TMEM254-202ENST00000372274 MBD5Q9P267 1494 aa18.14■□□□□ 0.5
TMEM254-202ENST00000372274 PREX1Q8TCU6 1659 aa18.13■□□□□ 0.49
TMEM254-202ENST00000372274 FBXO41Q8TF61 875 aa18.13■□□□□ 0.49
TMEM254-202ENST00000372274 UHRF1BP1Q6BDS2 1440 aa18.13■□□□□ 0.49
TMEM254-202ENST00000372274 VPS8Q8N3P4 1428 aa18.13■□□□□ 0.49
TMEM254-202ENST00000372274 A2MP01023 1474 aa18.13■□□□□ 0.49
TMEM254-202ENST00000372274 NCOA2Q15596 1464 aa18.13■□□□□ 0.49
TMEM254-202ENST00000372274 INO80Q9ULG1 1556 aaPredicted RBP18.13■□□□□ 0.49
TMEM254-202ENST00000372274 C3P01024 1663 aa18.1■□□□□ 0.49
TMEM254-202ENST00000372274 PLXNC1O60486 1568 aa18.1■□□□□ 0.49
TMEM254-202ENST00000372274 RTEL1-TNFRSF6BF6WH68 1400 aa18.1■□□□□ 0.49
TMEM254-202ENST00000372274 RSPH4AQ5TD94 716 aa18.09■□□□□ 0.49
TMEM254-202ENST00000372274 SETD1BQ9UPS6 1966 aaKnown RBP18.09■□□□□ 0.49
TMEM254-202ENST00000372274 SUPT6HQ7KZ85 1726 aaKnown RBP18.09■□□□□ 0.49
TMEM254-202ENST00000372274 ZMYM3Q14202 1370 aa18.08■□□□□ 0.49
TMEM254-202ENST00000372274 PPP6R1Q9UPN7 881 aa18.07■□□□□ 0.48
TMEM254-202ENST00000372274 LRRC9Q6ZRR7 1453 aa18.07■□□□□ 0.48
TMEM254-202ENST00000372274 GGT6Q6P531 493 aa18.06■□□□□ 0.48
TMEM254-202ENST00000372274 DMRT2Q9Y5R5 561 aa18.06■□□□□ 0.48
TMEM254-202ENST00000372274 CAMSAP2Q08AD1 1489 aa18.05■□□□□ 0.48
TMEM254-202ENST00000372274 CCDC141Q6ZP82 1450 aa18.05■□□□□ 0.48
TMEM254-202ENST00000372274 NPATQ14207 1427 aa18.05■□□□□ 0.48
TMEM254-202ENST00000372274 DHX29Q7Z478 1369 aaKnown RBP18.04■□□□□ 0.48
TMEM254-202ENST00000372274 MAP3K1Q13233 1512 aa18.03■□□□□ 0.48
TMEM254-202ENST00000372274 MROH2AA6NES4 1674 aa18.03■□□□□ 0.48
TMEM254-202ENST00000372274 ADGBQ8N7X0 1667 aa18.03■□□□□ 0.48
TMEM254-202ENST00000372274 KANK4Q5T7N3 995 aaPredicted RBP18.02■□□□□ 0.48
TMEM254-202ENST00000372274 TSPY4P0CV99 314 aa18■□□□□ 0.47
TMEM254-202ENST00000372274 TSPY10P0CW01 314 aa18■□□□□ 0.47
TMEM254-202ENST00000372274 CERKQ8TCT0 537 aa18■□□□□ 0.47
TMEM254-202ENST00000372274 STRCQ7RTU9 1775 aa17.99■□□□□ 0.47
TMEM254-202ENST00000372274 KIF3BO15066 747 aa17.98■□□□□ 0.47
TMEM254-202ENST00000372274 ARHGEF5Q12774 1597 aa17.98■□□□□ 0.47
TMEM254-202ENST00000372274 CLTCQ00610 1675 aaKnown RBP17.98■□□□□ 0.47
TMEM254-202ENST00000372274 PTPRTO14522 1441 aa17.98■□□□□ 0.47
TMEM254-202ENST00000372274 PTPRKQ15262 1439 aa17.98■□□□□ 0.47
TMEM254-202ENST00000372274 MIA2Q96PC5 1412 aa17.96■□□□□ 0.47
TMEM254-202ENST00000372274 NCOA1Q15788 1441 aa17.95■□□□□ 0.46
TMEM254-202ENST00000372274 MYOM3Q5VTT5 1437 aa17.94■□□□□ 0.46
TMEM254-202ENST00000372274 APLP2Q06481 763 aa17.93■□□□□ 0.46
TMEM254-202ENST00000372274 CAMSAP1Q5T5Y3 1602 aa17.9■□□□□ 0.46
TMEM254-202ENST00000372274 FAM135AQ9P2D6 1515 aa17.9■□□□□ 0.46
TMEM254-202ENST00000372274 WASHC2CQ9Y4E1 1318 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms