RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 MAP3K4Q9Y6R4 1608 aa16.93■□□□□ 0.3
TSPAN1-201ENST00000372003 NCOA2Q15596 1464 aa16.92■□□□□ 0.3
TSPAN1-201ENST00000372003 PLCH2O75038 1416 aa16.92■□□□□ 0.3
TSPAN1-201ENST00000372003 TSPOAP1O95153 1857 aa16.92■□□□□ 0.3
TSPAN1-201ENST00000372003 ZNF777Q9ULD5 760 aaPredicted RBP16.92■□□□□ 0.3
TSPAN1-201ENST00000372003 EFCAB2Q5VUJ9 269 aa16.91■□□□□ 0.3
TSPAN1-201ENST00000372003 CFDP1Q9UEE9 299 aaPredicted RBP16.9■□□□□ 0.3
TSPAN1-201ENST00000372003 TEX14Q8IWB6 1497 aa16.89■□□□□ 0.29
TSPAN1-201ENST00000372003 GPATCH8Q9UKJ3 1502 aaKnown RBP16.89■□□□□ 0.29
TSPAN1-201ENST00000372003 FANCAO15360 1455 aa16.87■□□□□ 0.29
TSPAN1-201ENST00000372003 SUPT6HQ7KZ85 1726 aaKnown RBP16.87■□□□□ 0.29
TSPAN1-201ENST00000372003 ARHGAP5Q13017 1502 aa16.87■□□□□ 0.29
TSPAN1-201ENST00000372003 PHLDB1Q86UU1 1377 aa16.85■□□□□ 0.29
TSPAN1-201ENST00000372003 PPRC1Q5VV67 1664 aaKnown RBP16.85■□□□□ 0.29
TSPAN1-201ENST00000372003 AKNAQ7Z591 1439 aa16.84■□□□□ 0.29
TSPAN1-201ENST00000372003 ZNF644Q9H582 1327 aaPredicted RBP16.84■□□□□ 0.29
TSPAN1-201ENST00000372003 NEO1Q92859 1461 aa16.82■□□□□ 0.28
TSPAN1-201ENST00000372003 MYO5CQ9NQX4 1742 aa16.82■□□□□ 0.28
TSPAN1-201ENST00000372003 RAPGEF3O95398 923 aa16.81■□□□□ 0.28
TSPAN1-201ENST00000372003 MYOM3Q5VTT5 1437 aa16.81■□□□□ 0.28
TSPAN1-201ENST00000372003 COL17A1Q9UMD9 1497 aaPredicted RBP16.8■□□□□ 0.28
TSPAN1-201ENST00000372003 SCAPERQ9BY12 1400 aa16.8■□□□□ 0.28
TSPAN1-201ENST00000372003 HNRNPMP52272 730 aaKnown RBP eCLIP16.8■□□□□ 0.28
TSPAN1-201ENST00000372003 PREX2Q70Z35 1606 aa16.79■□□□□ 0.28
TSPAN1-201ENST00000372003 ARAP3Q8WWN8 1544 aa16.79■□□□□ 0.28
TSPAN1-201ENST00000372003 CDC42BPAQ5VT25 1732 aa16.79■□□□□ 0.28
TSPAN1-201ENST00000372003 ADGRL1O94910 1474 aa16.79■□□□□ 0.28
TSPAN1-201ENST00000372003 CDC42BPBQ9Y5S2 1711 aa16.78■□□□□ 0.28
TSPAN1-201ENST00000372003 AFAP1Q8N556 730 aa16.76■□□□□ 0.27
TSPAN1-201ENST00000372003 DENND4BO75064 1496 aaPredicted RBP16.75■□□□□ 0.27
TSPAN1-201ENST00000372003 FAM50AQ14320 339 aaKnown RBP16.75■□□□□ 0.27
TSPAN1-201ENST00000372003 MIA2Q96PC5 1412 aa16.75■□□□□ 0.27
TSPAN1-201ENST00000372003 CLSPNQ9HAW4 1339 aa16.75■□□□□ 0.27
TSPAN1-201ENST00000372003 KDM6BO15054 1643 aa16.74■□□□□ 0.27
TSPAN1-201ENST00000372003 CFAP74Q9C0B2 1584 aa16.74■□□□□ 0.27
TSPAN1-201ENST00000372003 ITSN2Q9NZM3 1697 aa16.74■□□□□ 0.27
TSPAN1-201ENST00000372003 FGD6Q6ZV73 1430 aa16.74■□□□□ 0.27
TSPAN1-201ENST00000372003 MYT1LQ9UL68 1186 aa16.74■□□□□ 0.27
TSPAN1-201ENST00000372003 SAMD9LQ8IVG5 1584 aa16.73■□□□□ 0.27
TSPAN1-201ENST00000372003 ARHGEF12Q9NZN5 1544 aa16.73■□□□□ 0.27
TSPAN1-201ENST00000372003 CAMSAP2Q08AD1 1489 aa16.72■□□□□ 0.27
TSPAN1-201ENST00000372003 TRAPPC8Q9Y2L5 1435 aa16.72■□□□□ 0.27
TSPAN1-201ENST00000372003 KIAA1107Q9UPP5 1409 aa16.71■□□□□ 0.27
TSPAN1-201ENST00000372003 PLEKHH2Q8IVE3 1493 aa16.7■□□□□ 0.26
TSPAN1-201ENST00000372003 ABCC1P33527 1531 aa16.7■□□□□ 0.26
TSPAN1-201ENST00000372003 SYCP2Q9BX26 1530 aa16.7■□□□□ 0.26
TSPAN1-201ENST00000372003 POGZQ7Z3K3 1410 aa16.69■□□□□ 0.26
TSPAN1-201ENST00000372003 MBD5Q9P267 1494 aa16.67■□□□□ 0.26
TSPAN1-201ENST00000372003 TSPY4P0CV99 314 aa16.67■□□□□ 0.26
TSPAN1-201ENST00000372003 TSPY10P0CW01 314 aa16.67■□□□□ 0.26
TSPAN1-201ENST00000372003 ITGAEP38570 1179 aa16.67■□□□□ 0.26
TSPAN1-201ENST00000372003 RSPH4AQ5TD94 716 aa16.67■□□□□ 0.26
TSPAN1-201ENST00000372003 PTPN23Q9H3S7 1636 aa16.66■□□□□ 0.26
TSPAN1-201ENST00000372003 ZNF518AQ6AHZ1 1483 aa16.66■□□□□ 0.26
TSPAN1-201ENST00000372003 SPAG9O60271 1321 aaKnown RBP16.66■□□□□ 0.26
TSPAN1-201ENST00000372003 TCOF1Q13428 1488 aaKnown RBP16.64■□□□□ 0.25
TSPAN1-201ENST00000372003 FRMPD1Q5SYB0 1578 aa16.64■□□□□ 0.25
TSPAN1-201ENST00000372003 MIER1Q8N108 512 aa16.63■□□□□ 0.25
TSPAN1-201ENST00000372003 CHIC2Q9UKJ5 165 aa16.63■□□□□ 0.25
TSPAN1-201ENST00000372003 CCDC141Q6ZP82 1450 aa16.62■□□□□ 0.25
TSPAN1-201ENST00000372003 RRBP1Q9P2E9 1410 aaKnown RBP16.61■□□□□ 0.25
TSPAN1-201ENST00000372003 RICTORQ6R327 1708 aa16.6■□□□□ 0.25
TSPAN1-201ENST00000372003 ABCC5O15440 1437 aa16.6■□□□□ 0.25
TSPAN1-201ENST00000372003 YEATS2Q9ULM3 1422 aa16.6■□□□□ 0.25
TSPAN1-201ENST00000372003 DAPK1P53355 1430 aa16.59■□□□□ 0.25
TSPAN1-201ENST00000372003 KDM5CP41229 1560 aa16.58■□□□□ 0.24
TSPAN1-201ENST00000372003 MLH3Q9UHC1 1453 aa16.58■□□□□ 0.24
TSPAN1-201ENST00000372003 ARHGEF5Q12774 1597 aa16.57■□□□□ 0.24
TSPAN1-201ENST00000372003 ZMYM4Q5VZL5 1548 aa16.57■□□□□ 0.24
TSPAN1-201ENST00000372003 MAGI2Q86UL8 1455 aa16.57■□□□□ 0.24
TSPAN1-201ENST00000372003 C9orf84Q5VXU9 1444 aa16.56■□□□□ 0.24
TSPAN1-201ENST00000372003 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.56■□□□□ 0.24
TSPAN1-201ENST00000372003 ZFYVE16Q7Z3T8 1539 aa16.56■□□□□ 0.24
TSPAN1-201ENST00000372003 RRP7BPQ9NSQ0 103 aa16.56■□□□□ 0.24
TSPAN1-201ENST00000372003 ARID4BQ4LE39 1312 aaPredicted RBP16.55■□□□□ 0.24
TSPAN1-201ENST00000372003 RTEL1-TNFRSF6BF6WH68 1400 aa16.54■□□□□ 0.24
TSPAN1-201ENST00000372003 PTPRKQ15262 1439 aa16.54■□□□□ 0.24
TSPAN1-201ENST00000372003 HECW2Q9P2P5 1572 aa16.54■□□□□ 0.24
TSPAN1-201ENST00000372003 ATP7AQ04656 1500 aa16.54■□□□□ 0.24
TSPAN1-201ENST00000372003 DNMT1P26358 1616 aaKnown RBP16.52■□□□□ 0.24
TSPAN1-201ENST00000372003 ATP10AO60312 1499 aa16.52■□□□□ 0.24
TSPAN1-201ENST00000372003 YTHDC1Q96MU7 727 aaKnown RBP16.52■□□□□ 0.23
TSPAN1-201ENST00000372003 KIDINS220Q9ULH0 1771 aa16.5■□□□□ 0.23
TSPAN1-201ENST00000372003 ANKRD30AQ9BXX3 1397 aa16.5■□□□□ 0.23
TSPAN1-201ENST00000372003 SHANK2Q9UPX8 1470 aa16.49■□□□□ 0.23
TSPAN1-201ENST00000372003 MLECQ14165 292 aa16.49■□□□□ 0.23
TSPAN1-201ENST00000372003 ARHGEF40Q8TER5 1519 aa16.49■□□□□ 0.23
TSPAN1-201ENST00000372003 INO80Q9ULG1 1556 aaPredicted RBP16.49■□□□□ 0.23
TSPAN1-201ENST00000372003 DIP2CQ9Y2E4 1556 aa16.48■□□□□ 0.23
TSPAN1-201ENST00000372003 ABCA6Q8N139 1617 aa16.48■□□□□ 0.23
TSPAN1-201ENST00000372003 KIF15Q9NS87 1388 aa16.48■□□□□ 0.23
TSPAN1-201ENST00000372003 NCOA1Q15788 1441 aa16.48■□□□□ 0.23
TSPAN1-201ENST00000372003 DHX57Q6P158 1386 aaKnown RBP16.47■□□□□ 0.23
TSPAN1-201ENST00000372003 A2MP01023 1474 aa16.47■□□□□ 0.23
TSPAN1-201ENST00000372003 DHX29Q7Z478 1369 aaKnown RBP16.46■□□□□ 0.23
TSPAN1-201ENST00000372003 MAST1Q9Y2H9 1570 aa16.46■□□□□ 0.23
TSPAN1-201ENST00000372003 KIF3BO15066 747 aa16.45■□□□□ 0.22
TSPAN1-201ENST00000372003 CROCC2H7BZ55 1655 aa16.44■□□□□ 0.22
TSPAN1-201ENST00000372003 GGT6Q6P531 493 aa16.44■□□□□ 0.22
TSPAN1-201ENST00000372003 ROCK1Q13464 1354 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms