RNA–Protein interactions for RNA: ENST00000371600.7

NPDC1-201, Transcript of neural proliferation, differentiation and control 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPDC1, Length 2,187 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-201ENST00000371600 DAPK1P53355 1430 aa35.44■■■■□ 3.26
NPDC1-201ENST00000371600 NUP160Q12769 1436 aa35.42■■■■□ 3.26
NPDC1-201ENST00000371600 DNMT1P26358 1616 aaKnown RBP35.38■■■■□ 3.25
NPDC1-201ENST00000371600 ABCC5O15440 1437 aa35.38■■■■□ 3.25
NPDC1-201ENST00000371600 TROQ12816 1431 aaPredicted RBP35.31■■■■□ 3.24
NPDC1-201ENST00000371600 ZNF644Q9H582 1327 aaPredicted RBP35.27■■■■□ 3.24
NPDC1-201ENST00000371600 ANKRD30BQ9BXX2 1392 aa35.25■■■■□ 3.23
NPDC1-201ENST00000371600 HSPA5P11021 654 aaKnown RBP35.24■■■■□ 3.23
NPDC1-201ENST00000371600 JPH4Q96JJ6 628 aa35.24■■■■□ 3.23
NPDC1-201ENST00000371600 CARMIL2Q6F5E8 1435 aa35.24■■■■□ 3.23
NPDC1-201ENST00000371600 EIF4G2P78344 907 aaKnown RBP eCLIP35.23■■■■□ 3.23
NPDC1-201ENST00000371600 PRG4Q92954 1404 aaPredicted RBP35.23■■■■□ 3.23
NPDC1-201ENST00000371600 L3MBTL2Q969R5 705 aa35.23■■■■□ 3.23
NPDC1-201ENST00000371600 RPRD2Q5VT52 1461 aaKnown RBP35.2■■■■□ 3.22
NPDC1-201ENST00000371600 PLB1Q6P1J6 1458 aa35.19■■■■□ 3.22
NPDC1-201ENST00000371600 CFDP1Q9UEE9 299 aaPredicted RBP35.19■■■■□ 3.22
NPDC1-201ENST00000371600 FOXD1Q16676 465 aa35.17■■■■□ 3.22
NPDC1-201ENST00000371600 ITSN2Q9NZM3 1697 aa35.17■■■■□ 3.22
NPDC1-201ENST00000371600 CAMSAP2Q08AD1 1489 aa35.16■■■■□ 3.22
NPDC1-201ENST00000371600 WASHC2AQ641Q2 1341 aa35.16■■■■□ 3.22
NPDC1-201ENST00000371600 GPATCH8Q9UKJ3 1502 aaKnown RBP35.16■■■■□ 3.22
NPDC1-201ENST00000371600 CHD1O14646 1710 aa35.15■■■■□ 3.22
NPDC1-201ENST00000371600 ADCY10Q96PN6 1610 aa35.14■■■■□ 3.22
NPDC1-201ENST00000371600 SLC4A1APQ9BWU0 796 aaKnown RBP35.14■■■■□ 3.22
NPDC1-201ENST00000371600 NCOA1Q15788 1441 aa35.1■■■■□ 3.21
NPDC1-201ENST00000371600 ADGRL2O95490 1459 aa35.08■■■■□ 3.21
NPDC1-201ENST00000371600 TEX14Q8IWB6 1497 aa35.07■■■■□ 3.2
NPDC1-201ENST00000371600 KIF14Q15058 1648 aa35.03■■■■□ 3.2
NPDC1-201ENST00000371600 ADGBQ8N7X0 1667 aa35.03■■■■□ 3.2
NPDC1-201ENST00000371600 PZPP20742 1482 aa35.01■■■■□ 3.2
NPDC1-201ENST00000371600 PLEKHD1A6NEE1 506 aa34.99■■■■□ 3.19
NPDC1-201ENST00000371600 FKBP8Q14318 412 aa34.99■■■■□ 3.19
NPDC1-201ENST00000371600 CNTLNQ9NXG0 1405 aa34.99■■■■□ 3.19
NPDC1-201ENST00000371600 NBPF8Q3BBV2 869 aa34.98■■■■□ 3.19
NPDC1-201ENST00000371600 ANKRD30AQ9BXX3 1397 aa34.98■■■■□ 3.19
NPDC1-201ENST00000371600 ABCA8O94911 1581 aa34.98■■■■□ 3.19
NPDC1-201ENST00000371600 ZNF777Q9ULD5 760 aaPredicted RBP34.98■■■■□ 3.19
NPDC1-201ENST00000371600 NEFLP07196 543 aa34.96■■■■□ 3.19
NPDC1-201ENST00000371600 CROCC2H7BZ55 1655 aa34.96■■■■□ 3.19
NPDC1-201ENST00000371600 CCDC7Q96M83 1385 aa34.95■■■■□ 3.19
NPDC1-201ENST00000371600 KIAA1107Q9UPP5 1409 aa34.92■■■■□ 3.18
NPDC1-201ENST00000371600 ATP10BO94823 1461 aa34.91■■■■□ 3.18
NPDC1-201ENST00000371600 SPATA31E1Q6ZUB1 1445 aa34.91■■■■□ 3.18
NPDC1-201ENST00000371600 ABCC10Q5T3U5 1492 aa34.89■■■■□ 3.18
NPDC1-201ENST00000371600 C11orf95C9JLR9 678 aaPredicted RBP34.88■■■■□ 3.17
NPDC1-201ENST00000371600 SHANK2Q9UPX8 1470 aa34.87■■■■□ 3.17
NPDC1-201ENST00000371600 SHROOM2Q13796 1616 aa34.86■■■■□ 3.17
NPDC1-201ENST00000371600 ANKRD50Q9ULJ7 1429 aa34.86■■■■□ 3.17
NPDC1-201ENST00000371600 TSHZ2Q9NRE2 1034 aa34.83■■■■□ 3.17
NPDC1-201ENST00000371600 CDC42BPAQ5VT25 1732 aa34.82■■■■□ 3.17
NPDC1-201ENST00000371600 HNRNPUQ00839 825 aaKnown RBP eCLIP34.81■■■■□ 3.16
NPDC1-201ENST00000371600 PKD2Q13563 968 aa34.81■■■■□ 3.16
NPDC1-201ENST00000371600 BCANQ96GW7 911 aa34.81■■■■□ 3.16
NPDC1-201ENST00000371600 MBD5Q9P267 1494 aa34.8■■■■□ 3.16
NPDC1-201ENST00000371600 MYT1Q01538 1121 aa34.79■■■■□ 3.16
NPDC1-201ENST00000371600 PRKRIP1Q9H875 184 aaPredicted RBP34.79■■■■□ 3.16
NPDC1-201ENST00000371600 C9orf84Q5VXU9 1444 aa34.78■■■■□ 3.16
NPDC1-201ENST00000371600 PTPRGP23470 1445 aa34.78■■■■□ 3.16
NPDC1-201ENST00000371600 KIF7Q2M1P5 1343 aa34.76■■■■□ 3.15
NPDC1-201ENST00000371600 TSPY4P0CV99 314 aa34.76■■■■□ 3.15
NPDC1-201ENST00000371600 TSPY10P0CW01 314 aa34.76■■■■□ 3.15
NPDC1-201ENST00000371600 ERCC6L2Q5T890 1561 aa34.75■■■■□ 3.15
NPDC1-201ENST00000371600 POLR1AO95602 1720 aaPredicted RBP34.74■■■■□ 3.15
NPDC1-201ENST00000371600 NUP155O75694 1391 aa34.7■■■■□ 3.14
NPDC1-201ENST00000371600 ARHGEF5Q12774 1597 aa34.68■■■■□ 3.14
NPDC1-201ENST00000371600 KDM5DQ9BY66 1539 aa34.68■■■■□ 3.14
NPDC1-201ENST00000371600 CLASP1Q7Z460 1538 aa34.66■■■■□ 3.14
NPDC1-201ENST00000371600 UHRF1BP1Q6BDS2 1440 aa34.63■■■■□ 3.13
NPDC1-201ENST00000371600 CCDC184Q52MB2 194 aa34.63■■■■□ 3.13
NPDC1-201ENST00000371600 RSPH4AQ5TD94 716 aa34.62■■■■□ 3.13
NPDC1-201ENST00000371600 USP47Q96K76 1375 aa34.62■■■■□ 3.13
NPDC1-201ENST00000371600 ARID4BQ4LE39 1312 aaPredicted RBP34.62■■■■□ 3.13
NPDC1-201ENST00000371600 KIF15Q9NS87 1388 aa34.61■■■■□ 3.13
NPDC1-201ENST00000371600 HNRNPMP52272 730 aaKnown RBP eCLIP34.6■■■■□ 3.13
NPDC1-201ENST00000371600 MRS2Q9HD23 443 aa34.59■■■■□ 3.13
NPDC1-201ENST00000371600 ARHGEF12Q9NZN5 1544 aa34.57■■■■□ 3.12
NPDC1-201ENST00000371600 CCDC141Q6ZP82 1450 aa34.55■■■■□ 3.12
NPDC1-201ENST00000371600 ZNF326Q5BKZ1 582 aaKnown RBP34.55■■■■□ 3.12
NPDC1-201ENST00000371600 RALGAPBQ86X10 1494 aa34.53■■■■□ 3.12
NPDC1-201ENST00000371600 KDM5CP41229 1560 aa34.52■■■■□ 3.12
NPDC1-201ENST00000371600 PREX2Q70Z35 1606 aa34.51■■■■□ 3.11
NPDC1-201ENST00000371600 FAM9BQ8IZU0 186 aa34.5■■■■□ 3.11
NPDC1-201ENST00000371600 SAMD9LQ8IVG5 1584 aa34.5■■■■□ 3.11
NPDC1-201ENST00000371600 ZBED9Q6R2W3 1325 aa34.48■■■■□ 3.11
NPDC1-201ENST00000371600 DHX29Q7Z478 1369 aaKnown RBP34.48■■■■□ 3.11
NPDC1-201ENST00000371600 CDC42BPBQ9Y5S2 1711 aa34.47■■■■□ 3.11
NPDC1-201ENST00000371600 ABCC2Q92887 1545 aa34.46■■■■□ 3.11
NPDC1-201ENST00000371600 BCORL1Q5H9F3 1711 aa34.46■■■■□ 3.11
NPDC1-201ENST00000371600 ERICH6BQ5W0A0 696 aa34.46■■■■□ 3.11
NPDC1-201ENST00000371600 ROCK2O75116 1388 aaKnown RBP34.45■■■■□ 3.1
NPDC1-201ENST00000371600 CARD11Q9BXL7 1154 aa34.42■■■■□ 3.1
NPDC1-201ENST00000371600 FAM135AQ9P2D6 1515 aa34.39■■■■□ 3.1
NPDC1-201ENST00000371600 MAST1Q9Y2H9 1570 aa34.37■■■■□ 3.09
NPDC1-201ENST00000371600 DCAF11Q8TEB1 546 aa34.35■■■■□ 3.09
NPDC1-201ENST00000371600 POLR3GLQ9BT43 218 aa34.33■■■■□ 3.09
NPDC1-201ENST00000371600 ARHGAP5Q13017 1502 aa34.33■■■■□ 3.09
NPDC1-201ENST00000371600 KDM2AQ9Y2K7 1162 aa34.33■■■■□ 3.09
NPDC1-201ENST00000371600 SYCP2Q9BX26 1530 aa34.33■■■■□ 3.09
NPDC1-201ENST00000371600 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.32■■■■□ 3.08
NPDC1-201ENST00000371600 PLEKHH2Q8IVE3 1493 aa34.32■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms