RNA–Protein interactions for RNA: ENST00000371527.5

NKRF-202, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-202ENST00000371527 MYO5CQ9NQX4 1742 aa7.84□□□□□ -1.15
NKRF-202ENST00000371527 POGZQ7Z3K3 1410 aa7.84□□□□□ -1.15
NKRF-202ENST00000371527 ARHGEF40Q8TER5 1519 aa7.83□□□□□ -1.16
NKRF-202ENST00000371527 ARHGAP5Q13017 1502 aa7.82□□□□□ -1.16
NKRF-202ENST00000371527 ZFYVE16Q7Z3T8 1539 aa7.82□□□□□ -1.16
NKRF-202ENST00000371527 ADAMTSL3P82987 1691 aa7.82□□□□□ -1.16
NKRF-202ENST00000371527 YEATS2Q9ULM3 1422 aa7.82□□□□□ -1.16
NKRF-202ENST00000371527 SLC24A1O60721 1099 aa7.81□□□□□ -1.16
NKRF-202ENST00000371527 LOC105371045A0A1W2PR82 267 aa7.81□□□□□ -1.16
NKRF-202ENST00000371527 PELP1Q8IZL8 1130 aaKnown RBP7.81□□□□□ -1.16
NKRF-202ENST00000371527 PREX2Q70Z35 1606 aa7.81□□□□□ -1.16
NKRF-202ENST00000371527 CDC42BPBQ9Y5S2 1711 aa7.8□□□□□ -1.16
NKRF-202ENST00000371527 GPATCH8Q9UKJ3 1502 aaKnown RBP7.8□□□□□ -1.16
NKRF-202ENST00000371527 BCORL1Q5H9F3 1711 aa7.8□□□□□ -1.16
NKRF-202ENST00000371527 ATP10AO60312 1499 aa7.8□□□□□ -1.16
NKRF-202ENST00000371527 KDM5CP41229 1560 aa7.79□□□□□ -1.16
NKRF-202ENST00000371527 ZNF518AQ6AHZ1 1483 aa7.79□□□□□ -1.16
NKRF-202ENST00000371527 ARHGEF12Q9NZN5 1544 aa7.79□□□□□ -1.16
NKRF-202ENST00000371527 AFAP1Q8N556 730 aa7.79□□□□□ -1.16
NKRF-202ENST00000371527 ARID4BQ4LE39 1312 aaPredicted RBP7.79□□□□□ -1.16
NKRF-202ENST00000371527 ABCC1P33527 1531 aa7.79□□□□□ -1.16
NKRF-202ENST00000371527 CDC42BPAQ5VT25 1732 aa7.78□□□□□ -1.16
NKRF-202ENST00000371527 MLH3Q9UHC1 1453 aa7.78□□□□□ -1.16
NKRF-202ENST00000371527 MTUS2Q5JR59 1369 aa7.78□□□□□ -1.16
NKRF-202ENST00000371527 C9orf84Q5VXU9 1444 aa7.78□□□□□ -1.16
NKRF-202ENST00000371527 TRAPPC8Q9Y2L5 1435 aa7.78□□□□□ -1.16
NKRF-202ENST00000371527 PTPRMP28827 1452 aa7.78□□□□□ -1.16
NKRF-202ENST00000371527 CCNB3Q8WWL7 1395 aa7.77□□□□□ -1.17
NKRF-202ENST00000371527 EHBP1L1Q8N3D4 1523 aa7.77□□□□□ -1.17
NKRF-202ENST00000371527 SIGLEC1Q9BZZ2 1709 aa7.77□□□□□ -1.17
NKRF-202ENST00000371527 KIAA1107Q9UPP5 1409 aa7.77□□□□□ -1.17
NKRF-202ENST00000371527 ITSN2Q9NZM3 1697 aa7.76□□□□□ -1.17
NKRF-202ENST00000371527 VPS8Q8N3P4 1428 aa7.76□□□□□ -1.17
NKRF-202ENST00000371527 MADDQ8WXG6 1647 aa7.76□□□□□ -1.17
NKRF-202ENST00000371527 SAMD9LQ8IVG5 1584 aa7.76□□□□□ -1.17
NKRF-202ENST00000371527 REREQ9P2R6 1566 aa7.76□□□□□ -1.17
NKRF-202ENST00000371527 CFDP1Q9UEE9 299 aaPredicted RBP7.76□□□□□ -1.17
NKRF-202ENST00000371527 HECW2Q9P2P5 1572 aa7.76□□□□□ -1.17
NKRF-202ENST00000371527 PLEKHH2Q8IVE3 1493 aa7.75□□□□□ -1.17
NKRF-202ENST00000371527 DIP2CQ9Y2E4 1556 aa7.75□□□□□ -1.17
NKRF-202ENST00000371527 ZNF777Q9ULD5 760 aaPredicted RBP7.74□□□□□ -1.17
NKRF-202ENST00000371527 TIAM1Q13009 1591 aa7.74□□□□□ -1.17
NKRF-202ENST00000371527 MAP3K1Q13233 1512 aa7.74□□□□□ -1.17
NKRF-202ENST00000371527 HNRNPMP52272 730 aaKnown RBP eCLIP7.74□□□□□ -1.17
NKRF-202ENST00000371527 AGLP35573 1532 aa7.74□□□□□ -1.17
NKRF-202ENST00000371527 ABCA6Q8N139 1617 aa7.73□□□□□ -1.17
NKRF-202ENST00000371527 SYCP2Q9BX26 1530 aa7.73□□□□□ -1.17
NKRF-202ENST00000371527 RIMS1Q86UR5 1692 aaKnown RBP7.73□□□□□ -1.17
NKRF-202ENST00000371527 MLECQ14165 292 aa7.73□□□□□ -1.17
NKRF-202ENST00000371527 KIDINS220Q9ULH0 1771 aa7.73□□□□□ -1.17
NKRF-202ENST00000371527 NCOA2Q15596 1464 aa7.72□□□□□ -1.17
NKRF-202ENST00000371527 MYT1LQ9UL68 1186 aa7.72□□□□□ -1.17
NKRF-202ENST00000371527 SPAG9O60271 1321 aaKnown RBP7.72□□□□□ -1.17
NKRF-202ENST00000371527 LRRC9Q6ZRR7 1453 aa7.72□□□□□ -1.17
NKRF-202ENST00000371527 MBD5Q9P267 1494 aa7.72□□□□□ -1.17
NKRF-202ENST00000371527 ZNF644Q9H582 1327 aaPredicted RBP7.72□□□□□ -1.17
NKRF-202ENST00000371527 SUPT6HQ7KZ85 1726 aaKnown RBP7.71□□□□□ -1.18
NKRF-202ENST00000371527 INO80Q9ULG1 1556 aaPredicted RBP7.7□□□□□ -1.18
NKRF-202ENST00000371527 RTEL1-TNFRSF6BF6WH68 1400 aa7.7□□□□□ -1.18
NKRF-202ENST00000371527 FER1L4A9Z1Z3 1794 aa7.7□□□□□ -1.18
NKRF-202ENST00000371527 ATP7AQ04656 1500 aa7.7□□□□□ -1.18
NKRF-202ENST00000371527 KANK4Q5T7N3 995 aaPredicted RBP7.69□□□□□ -1.18
NKRF-202ENST00000371527 RSPH4AQ5TD94 716 aa7.69□□□□□ -1.18
NKRF-202ENST00000371527 LMTK3Q96Q04 1460 aa7.69□□□□□ -1.18
NKRF-202ENST00000371527 A2MP01023 1474 aa7.68□□□□□ -1.18
NKRF-202ENST00000371527 CAMSAP2Q08AD1 1489 aa7.68□□□□□ -1.18
NKRF-202ENST00000371527 PLXNC1O60486 1568 aa7.68□□□□□ -1.18
NKRF-202ENST00000371527 CCDC141Q6ZP82 1450 aa7.67□□□□□ -1.18
NKRF-202ENST00000371527 CNTLNQ9NXG0 1405 aa7.67□□□□□ -1.18
NKRF-202ENST00000371527 MIA2Q96PC5 1412 aa7.67□□□□□ -1.18
NKRF-202ENST00000371527 ARHGEF5Q12774 1597 aa7.66□□□□□ -1.18
NKRF-202ENST00000371527 CEBPAP49715 358 aaPredicted RBP7.66□□□□□ -1.18
NKRF-202ENST00000371527 DHX29Q7Z478 1369 aaKnown RBP7.66□□□□□ -1.18
NKRF-202ENST00000371527 PLPPR3Q6T4P5 718 aa7.66□□□□□ -1.18
NKRF-202ENST00000371527 PPP6R1Q9UPN7 881 aa7.66□□□□□ -1.18
NKRF-202ENST00000371527 MYOM3Q5VTT5 1437 aa7.65□□□□□ -1.18
NKRF-202ENST00000371527 ADGBQ8N7X0 1667 aa7.65□□□□□ -1.19
NKRF-202ENST00000371527 ESF1Q9H501 851 aaKnown RBP7.64□□□□□ -1.19
NKRF-202ENST00000371527 APLP2Q06481 763 aa7.64□□□□□ -1.19
NKRF-202ENST00000371527 C3P01024 1663 aa7.63□□□□□ -1.19
NKRF-202ENST00000371527 MAST1Q9Y2H9 1570 aa7.63□□□□□ -1.19
NKRF-202ENST00000371527 ZMYM3Q14202 1370 aa7.63□□□□□ -1.19
NKRF-202ENST00000371527 HSPA2P54652 639 aa7.63□□□□□ -1.19
NKRF-202ENST00000371527 TSPY4P0CV99 314 aa7.63□□□□□ -1.19
NKRF-202ENST00000371527 TSPY10P0CW01 314 aa7.63□□□□□ -1.19
NKRF-202ENST00000371527 MROH2AA6NES4 1674 aa7.63□□□□□ -1.19
NKRF-202ENST00000371527 NPATQ14207 1427 aa7.63□□□□□ -1.19
NKRF-202ENST00000371527 PREX1Q8TCU6 1659 aa7.62□□□□□ -1.19
NKRF-202ENST00000371527 UHRF1BP1Q6BDS2 1440 aa7.62□□□□□ -1.19
NKRF-202ENST00000371527 GGT6Q6P531 493 aa7.62□□□□□ -1.19
NKRF-202ENST00000371527 SETD1BQ9UPS6 1966 aaKnown RBP7.61□□□□□ -1.19
NKRF-202ENST00000371527 TCOF1Q13428 1488 aaKnown RBP7.61□□□□□ -1.19
NKRF-202ENST00000371527 FAM135AQ9P2D6 1515 aa7.61□□□□□ -1.19
NKRF-202ENST00000371527 PTPRKQ15262 1439 aa7.6□□□□□ -1.19
NKRF-202ENST00000371527 KIF3BO15066 747 aa7.6□□□□□ -1.19
NKRF-202ENST00000371527 ABCC5O15440 1437 aa7.6□□□□□ -1.19
NKRF-202ENST00000371527 FGD6Q6ZV73 1430 aa7.6□□□□□ -1.19
NKRF-202ENST00000371527 CLTCQ00610 1675 aaKnown RBP7.6□□□□□ -1.19
NKRF-202ENST00000371527 PTPN23Q9H3S7 1636 aa7.59□□□□□ -1.19
NKRF-202ENST00000371527 SHANK2Q9UPX8 1470 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms