RNA–Protein interactions for RNA: ENST00000370850.6

HMGCLL1-203, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,171 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-203ENST00000370850 PLCH2O75038 1416 aa21.6■■□□□ 1.05
HMGCLL1-203ENST00000370850 MAP3K1Q13233 1512 aa21.6■■□□□ 1.05
HMGCLL1-203ENST00000370850 FANCAO15360 1455 aa21.58■■□□□ 1.04
HMGCLL1-203ENST00000370850 PREX2Q70Z35 1606 aa21.56■■□□□ 1.04
HMGCLL1-203ENST00000370850 MTUS2Q5JR59 1369 aa21.56■■□□□ 1.04
HMGCLL1-203ENST00000370850 AKNAQ7Z591 1439 aa21.52■■□□□ 1.04
HMGCLL1-203ENST00000370850 CDC42BPAQ5VT25 1732 aa21.52■■□□□ 1.03
HMGCLL1-203ENST00000370850 CDC42BPBQ9Y5S2 1711 aa21.52■■□□□ 1.03
HMGCLL1-203ENST00000370850 ARHGAP5Q13017 1502 aa21.5■■□□□ 1.03
HMGCLL1-203ENST00000370850 SUPT6HQ7KZ85 1726 aaKnown RBP21.49■■□□□ 1.03
HMGCLL1-203ENST00000370850 FRMPD1Q5SYB0 1578 aa21.48■■□□□ 1.03
HMGCLL1-203ENST00000370850 LRRC9Q6ZRR7 1453 aa21.48■■□□□ 1.03
HMGCLL1-203ENST00000370850 RICTORQ6R327 1708 aa21.46■■□□□ 1.03
HMGCLL1-203ENST00000370850 ADGRL1O94910 1474 aa21.46■■□□□ 1.03
HMGCLL1-203ENST00000370850 GPATCH8Q9UKJ3 1502 aaKnown RBP21.46■■□□□ 1.03
HMGCLL1-203ENST00000370850 EFCAB2Q5VUJ9 269 aa21.46■■□□□ 1.03
HMGCLL1-203ENST00000370850 DENND4BO75064 1496 aaPredicted RBP21.45■■□□□ 1.03
HMGCLL1-203ENST00000370850 ITSN2Q9NZM3 1697 aa21.45■■□□□ 1.02
HMGCLL1-203ENST00000370850 ABCC1P33527 1531 aa21.42■■□□□ 1.02
HMGCLL1-203ENST00000370850 NCOA2Q15596 1464 aa21.42■■□□□ 1.02
HMGCLL1-203ENST00000370850 ZMYM4Q5VZL5 1548 aa21.42■■□□□ 1.02
HMGCLL1-203ENST00000370850 CCNB3Q8WWL7 1395 aa21.42■■□□□ 1.02
HMGCLL1-203ENST00000370850 POGZQ7Z3K3 1410 aa21.41■■□□□ 1.02
HMGCLL1-203ENST00000370850 SCAPERQ9BY12 1400 aa21.4■■□□□ 1.02
HMGCLL1-203ENST00000370850 SAMD9LQ8IVG5 1584 aa21.38■■□□□ 1.01
HMGCLL1-203ENST00000370850 RAPGEF3O95398 923 aa21.37■■□□□ 1.01
HMGCLL1-203ENST00000370850 APLP2Q06481 763 aa21.36■■□□□ 1.01
HMGCLL1-203ENST00000370850 ZNF518AQ6AHZ1 1483 aa21.36■■□□□ 1.01
HMGCLL1-203ENST00000370850 KDM5CP41229 1560 aa21.36■■□□□ 1.01
HMGCLL1-203ENST00000370850 ARHGEF40Q8TER5 1519 aa21.35■■□□□ 1.01
HMGCLL1-203ENST00000370850 MAGI2Q86UL8 1455 aa21.35■■□□□ 1.01
HMGCLL1-203ENST00000370850 PLEKHH2Q8IVE3 1493 aa21.35■■□□□ 1.01
HMGCLL1-203ENST00000370850 KANK4Q5T7N3 995 aaPredicted RBP21.35■■□□□ 1.01
HMGCLL1-203ENST00000370850 ARHGEF12Q9NZN5 1544 aa21.33■■□□□ 1
HMGCLL1-203ENST00000370850 KIAA1107Q9UPP5 1409 aa21.32■■□□□ 1
HMGCLL1-203ENST00000370850 CFDP1Q9UEE9 299 aaPredicted RBP21.32■■□□□ 1
HMGCLL1-203ENST00000370850 ZFYVE16Q7Z3T8 1539 aa21.3■■□□□ 1
HMGCLL1-203ENST00000370850 SYCP2Q9BX26 1530 aa21.3■■□□□ 1
HMGCLL1-203ENST00000370850 HECW2Q9P2P5 1572 aa21.28■■□□□ 1
HMGCLL1-203ENST00000370850 MYOM3Q5VTT5 1437 aa21.27■■□□□ 1
HMGCLL1-203ENST00000370850 TRAPPC8Q9Y2L5 1435 aa21.27■■□□□ 1
HMGCLL1-203ENST00000370850 MLH3Q9UHC1 1453 aa21.26■□□□□ 0.99
HMGCLL1-203ENST00000370850 MIA2Q96PC5 1412 aa21.25■□□□□ 0.99
HMGCLL1-203ENST00000370850 ZNF777Q9ULD5 760 aaPredicted RBP21.25■□□□□ 0.99
HMGCLL1-203ENST00000370850 CAMSAP2Q08AD1 1489 aa21.25■□□□□ 0.99
HMGCLL1-203ENST00000370850 YEATS2Q9ULM3 1422 aa21.23■□□□□ 0.99
HMGCLL1-203ENST00000370850 MBD5Q9P267 1494 aa21.23■□□□□ 0.99
HMGCLL1-203ENST00000370850 AFAP1Q8N556 730 aa21.22■□□□□ 0.99
HMGCLL1-203ENST00000370850 ARHGEF5Q12774 1597 aa21.2■□□□□ 0.98
HMGCLL1-203ENST00000370850 INO80Q9ULG1 1556 aaPredicted RBP21.2■□□□□ 0.98
HMGCLL1-203ENST00000370850 REREQ9P2R6 1566 aa21.19■□□□□ 0.98
HMGCLL1-203ENST00000370850 DIP2CQ9Y2E4 1556 aa21.19■□□□□ 0.98
HMGCLL1-203ENST00000370850 ABCA6Q8N139 1617 aa21.19■□□□□ 0.98
HMGCLL1-203ENST00000370850 KIDINS220Q9ULH0 1771 aa21.19■□□□□ 0.98
HMGCLL1-203ENST00000370850 ZNF644Q9H582 1327 aaPredicted RBP21.19■□□□□ 0.98
HMGCLL1-203ENST00000370850 HNRNPMP52272 730 aaKnown RBP eCLIP21.18■□□□□ 0.98
HMGCLL1-203ENST00000370850 ATP10AO60312 1499 aa21.18■□□□□ 0.98
HMGCLL1-203ENST00000370850 C9orf84Q5VXU9 1444 aa21.17■□□□□ 0.98
HMGCLL1-203ENST00000370850 CCDC141Q6ZP82 1450 aa21.17■□□□□ 0.98
HMGCLL1-203ENST00000370850 ATP7AQ04656 1500 aa21.16■□□□□ 0.98
HMGCLL1-203ENST00000370850 FGD6Q6ZV73 1430 aa21.15■□□□□ 0.98
HMGCLL1-203ENST00000370850 SIGLEC1Q9BZZ2 1709 aa21.15■□□□□ 0.98
HMGCLL1-203ENST00000370850 PTPN23Q9H3S7 1636 aa21.15■□□□□ 0.98
HMGCLL1-203ENST00000370850 RSPH4AQ5TD94 716 aa21.14■□□□□ 0.97
HMGCLL1-203ENST00000370850 TCOF1Q13428 1488 aaKnown RBP21.13■□□□□ 0.97
HMGCLL1-203ENST00000370850 BCORL1Q5H9F3 1711 aa21.13■□□□□ 0.97
HMGCLL1-203ENST00000370850 SPAG9O60271 1321 aaKnown RBP21.13■□□□□ 0.97
HMGCLL1-203ENST00000370850 RTEL1-TNFRSF6BF6WH68 1400 aa21.12■□□□□ 0.97
HMGCLL1-203ENST00000370850 KDM4FA0A1W2PPD8 638 aa21.12■□□□□ 0.97
HMGCLL1-203ENST00000370850 ADAMTSL3P82987 1691 aa21.1■□□□□ 0.97
HMGCLL1-203ENST00000370850 MAST1Q9Y2H9 1570 aa21.1■□□□□ 0.97
HMGCLL1-203ENST00000370850 AGLP35573 1532 aa21.09■□□□□ 0.97
HMGCLL1-203ENST00000370850 ADGBQ8N7X0 1667 aa21.09■□□□□ 0.97
HMGCLL1-203ENST00000370850 PLXNC1O60486 1568 aa21.07■□□□□ 0.96
HMGCLL1-203ENST00000370850 MYT1LQ9UL68 1186 aa21.07■□□□□ 0.96
HMGCLL1-203ENST00000370850 CROCC2H7BZ55 1655 aa21.07■□□□□ 0.96
HMGCLL1-203ENST00000370850 DNMT1P26358 1616 aaKnown RBP21.05■□□□□ 0.96
HMGCLL1-203ENST00000370850 SHANK2Q9UPX8 1470 aa21.05■□□□□ 0.96
HMGCLL1-203ENST00000370850 ARID4BQ4LE39 1312 aaPredicted RBP21.04■□□□□ 0.96
HMGCLL1-203ENST00000370850 A2MP01023 1474 aa21.02■□□□□ 0.96
HMGCLL1-203ENST00000370850 MADDQ8WXG6 1647 aa21.02■□□□□ 0.96
HMGCLL1-203ENST00000370850 TSPY4P0CV99 314 aa21■□□□□ 0.95
HMGCLL1-203ENST00000370850 TSPY10P0CW01 314 aa21■□□□□ 0.95
HMGCLL1-203ENST00000370850 ABCC5O15440 1437 aa21■□□□□ 0.95
HMGCLL1-203ENST00000370850 DAPK1P53355 1430 aa21■□□□□ 0.95
HMGCLL1-203ENST00000370850 FER1L4A9Z1Z3 1794 aa20.97■□□□□ 0.95
HMGCLL1-203ENST00000370850 DHX29Q7Z478 1369 aaKnown RBP20.96■□□□□ 0.95
HMGCLL1-203ENST00000370850 RIMS1Q86UR5 1692 aaKnown RBP20.95■□□□□ 0.94
HMGCLL1-203ENST00000370850 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.95■□□□□ 0.94
HMGCLL1-203ENST00000370850 PTPRMP28827 1452 aa20.94■□□□□ 0.94
HMGCLL1-203ENST00000370850 PPARGC1BQ86YN6 1023 aaKnown RBP20.92■□□□□ 0.94
HMGCLL1-203ENST00000370850 EIF2AK4Q9P2K8 1649 aaKnown RBP20.92■□□□□ 0.94
HMGCLL1-203ENST00000370850 ADGRL2O95490 1459 aa20.91■□□□□ 0.94
HMGCLL1-203ENST00000370850 RRBP1Q9P2E9 1410 aaKnown RBP20.91■□□□□ 0.94
HMGCLL1-203ENST00000370850 DUOX2Q9NRD8 1548 aa20.9■□□□□ 0.94
HMGCLL1-203ENST00000370850 MLECQ14165 292 aa20.89■□□□□ 0.93
HMGCLL1-203ENST00000370850 FAM50AQ14320 339 aaKnown RBP20.89■□□□□ 0.93
HMGCLL1-203ENST00000370850 FAM135AQ9P2D6 1515 aa20.88■□□□□ 0.93
HMGCLL1-203ENST00000370850 CNTLNQ9NXG0 1405 aa20.87■□□□□ 0.93
HMGCLL1-203ENST00000370850 MROH2AA6NES4 1674 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms