RNA–Protein interactions for RNA: ENST00000370110.5

NPM3-201, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM3, Length 877 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-201ENST00000370110 SCAPERQ9BY12 1400 aa30.37■■■□□ 2.45
NPM3-201ENST00000370110 FMN1Q68DA7 1419 aa30.35■■■□□ 2.45
NPM3-201ENST00000370110 MAGI2Q86UL8 1455 aa30.35■■■□□ 2.45
NPM3-201ENST00000370110 KIF14Q15058 1648 aa30.34■■■□□ 2.45
NPM3-201ENST00000370110 ATP1B4Q9UN42 357 aaPredicted RBP30.34■■■□□ 2.45
NPM3-201ENST00000370110 MYO5CQ9NQX4 1742 aa30.32■■■□□ 2.44
NPM3-201ENST00000370110 PLPPR3Q6T4P5 718 aa30.3■■■□□ 2.44
NPM3-201ENST00000370110 LRRIQ1Q96JM4 1722 aa30.27■■■□□ 2.44
NPM3-201ENST00000370110 MLECQ14165 292 aa30.27■■■□□ 2.44
NPM3-201ENST00000370110 FBXO41Q8TF61 875 aa30.27■■■□□ 2.44
NPM3-201ENST00000370110 HSPA2P54652 639 aa30.26■■■□□ 2.43
NPM3-201ENST00000370110 FER1L4A9Z1Z3 1794 aa30.26■■■□□ 2.43
NPM3-201ENST00000370110 TROQ12816 1431 aaPredicted RBP30.23■■■□□ 2.43
NPM3-201ENST00000370110 EFCAB2Q5VUJ9 269 aa30.23■■■□□ 2.43
NPM3-201ENST00000370110 ATP10AO60312 1499 aa30.21■■■□□ 2.43
NPM3-201ENST00000370110 ARHGEF12Q9NZN5 1544 aa30.2■■■□□ 2.42
NPM3-201ENST00000370110 C9orf84Q5VXU9 1444 aa30.2■■■□□ 2.42
NPM3-201ENST00000370110 CDK11AQ9UQ88 783 aaPredicted RBP30.19■■■□□ 2.42
NPM3-201ENST00000370110 CLIP1P30622 1438 aa30.19■■■□□ 2.42
NPM3-201ENST00000370110 ARHGAP5Q13017 1502 aa30.18■■■□□ 2.42
NPM3-201ENST00000370110 KDM5CP41229 1560 aa30.15■■■□□ 2.42
NPM3-201ENST00000370110 ZNF518AQ6AHZ1 1483 aa30.14■■■□□ 2.42
NPM3-201ENST00000370110 AFAP1Q8N556 730 aa30.13■■■□□ 2.41
NPM3-201ENST00000370110 CDC42BPBQ9Y5S2 1711 aa30.12■■■□□ 2.41
NPM3-201ENST00000370110 CEP162Q5TB80 1403 aa30.11■■■□□ 2.41
NPM3-201ENST00000370110 DIP2CQ9Y2E4 1556 aa30.08■■■□□ 2.41
NPM3-201ENST00000370110 CEBPAP49715 358 aaPredicted RBP30.06■■■□□ 2.4
NPM3-201ENST00000370110 PREX2Q70Z35 1606 aa30.05■■■□□ 2.4
NPM3-201ENST00000370110 ABCA6Q8N139 1617 aa30.05■■■□□ 2.4
NPM3-201ENST00000370110 CASKIN1Q8WXD9 1431 aa30.05■■■□□ 2.4
NPM3-201ENST00000370110 ABCC1P33527 1531 aa30.02■■■□□ 2.4
NPM3-201ENST00000370110 PREX1Q8TCU6 1659 aa30.02■■■□□ 2.4
NPM3-201ENST00000370110 TRAPPC8Q9Y2L5 1435 aa30.02■■■□□ 2.4
NPM3-201ENST00000370110 REREQ9P2R6 1566 aa30.01■■■□□ 2.39
NPM3-201ENST00000370110 CCDC18Q5T9S5 1454 aa29.99■■■□□ 2.39
NPM3-201ENST00000370110 MLH3Q9UHC1 1453 aa29.99■■■□□ 2.39
NPM3-201ENST00000370110 ITSN2Q9NZM3 1697 aa29.98■■■□□ 2.39
NPM3-201ENST00000370110 MYT1LQ9UL68 1186 aa29.97■■■□□ 2.39
NPM3-201ENST00000370110 CDC42BPAQ5VT25 1732 aa29.96■■■□□ 2.39
NPM3-201ENST00000370110 KIDINS220Q9ULH0 1771 aa29.91■■■□□ 2.38
NPM3-201ENST00000370110 FYCO1Q9BQS8 1478 aa29.91■■■□□ 2.38
NPM3-201ENST00000370110 AGLP35573 1532 aa29.91■■■□□ 2.38
NPM3-201ENST00000370110 STRCQ7RTU9 1775 aa29.9■■■□□ 2.38
NPM3-201ENST00000370110 CERKQ8TCT0 537 aa29.9■■■□□ 2.38
NPM3-201ENST00000370110 C3P01024 1663 aa29.89■■■□□ 2.38
NPM3-201ENST00000370110 UHRF1BP1Q6BDS2 1440 aa29.87■■■□□ 2.37
NPM3-201ENST00000370110 SAMD9LQ8IVG5 1584 aa29.86■■■□□ 2.37
NPM3-201ENST00000370110 SETD1BQ9UPS6 1966 aaKnown RBP29.84■■■□□ 2.37
NPM3-201ENST00000370110 SYCP2Q9BX26 1530 aa29.81■■■□□ 2.36
NPM3-201ENST00000370110 GPATCH8Q9UKJ3 1502 aaKnown RBP29.81■■■□□ 2.36
NPM3-201ENST00000370110 ZNF777Q9ULD5 760 aaPredicted RBP29.79■■■□□ 2.36
NPM3-201ENST00000370110 HNRNPMP52272 730 aaKnown RBP eCLIP29.72■■■□□ 2.35
NPM3-201ENST00000370110 ESF1Q9H501 851 aaKnown RBP29.72■■■□□ 2.35
NPM3-201ENST00000370110 VPS8Q8N3P4 1428 aa29.71■■■□□ 2.35
NPM3-201ENST00000370110 CNTLNQ9NXG0 1405 aa29.71■■■□□ 2.35
NPM3-201ENST00000370110 DMRT2Q9Y5R5 561 aa29.7■■■□□ 2.35
NPM3-201ENST00000370110 SPAG9O60271 1321 aaKnown RBP29.7■■■□□ 2.34
NPM3-201ENST00000370110 SUPT6HQ7KZ85 1726 aaKnown RBP29.69■■■□□ 2.34
NPM3-201ENST00000370110 ATP7AQ04656 1500 aa29.69■■■□□ 2.34
NPM3-201ENST00000370110 INO80Q9ULG1 1556 aaPredicted RBP29.69■■■□□ 2.34
NPM3-201ENST00000370110 MROH2AA6NES4 1674 aa29.66■■■□□ 2.34
NPM3-201ENST00000370110 PTPRTO14522 1441 aa29.66■■■□□ 2.34
NPM3-201ENST00000370110 KIAA1107Q9UPP5 1409 aa29.66■■■□□ 2.34
NPM3-201ENST00000370110 PLXNC1O60486 1568 aa29.65■■■□□ 2.34
NPM3-201ENST00000370110 CFDP1Q9UEE9 299 aaPredicted RBP29.64■■■□□ 2.34
NPM3-201ENST00000370110 CCNB3Q8WWL7 1395 aa29.64■■■□□ 2.33
NPM3-201ENST00000370110 NCOA1Q15788 1441 aa29.63■■■□□ 2.33
NPM3-201ENST00000370110 PLEKHH2Q8IVE3 1493 aa29.62■■■□□ 2.33
NPM3-201ENST00000370110 ZMYM3Q14202 1370 aa29.61■■■□□ 2.33
NPM3-201ENST00000370110 MTUS2Q5JR59 1369 aa29.61■■■□□ 2.33
NPM3-201ENST00000370110 A2MP01023 1474 aa29.61■■■□□ 2.33
NPM3-201ENST00000370110 CLTCQ00610 1675 aaKnown RBP29.6■■■□□ 2.33
NPM3-201ENST00000370110 NPATQ14207 1427 aa29.6■■■□□ 2.33
NPM3-201ENST00000370110 APLP2Q06481 763 aa29.59■■■□□ 2.33
NPM3-201ENST00000370110 TIAM1Q13009 1591 aa29.59■■■□□ 2.33
NPM3-201ENST00000370110 LTBP4Q8N2S1 1624 aa29.59■■■□□ 2.33
NPM3-201ENST00000370110 ZNF644Q9H582 1327 aaPredicted RBP29.57■■■□□ 2.32
NPM3-201ENST00000370110 CAMSAP1Q5T5Y3 1602 aa29.56■■■□□ 2.32
NPM3-201ENST00000370110 EHBP1L1Q8N3D4 1523 aa29.53■■■□□ 2.32
NPM3-201ENST00000370110 MBD5Q9P267 1494 aa29.52■■■□□ 2.32
NPM3-201ENST00000370110 MYO3AQ8NEV4 1616 aa29.52■■■□□ 2.32
NPM3-201ENST00000370110 PTPRKQ15262 1439 aa29.51■■■□□ 2.31
NPM3-201ENST00000370110 ADGBQ8N7X0 1667 aa29.5■■■□□ 2.31
NPM3-201ENST00000370110 GGT6Q6P531 493 aa29.49■■■□□ 2.31
NPM3-201ENST00000370110 ZNF142P52746 1687 aaPredicted RBP29.49■■■□□ 2.31
NPM3-201ENST00000370110 NCKAP5LQ9HCH0 1330 aa29.45■■■□□ 2.31
NPM3-201ENST00000370110 CEP170BQ9Y4F5 1589 aaPredicted RBP29.45■■■□□ 2.31
NPM3-201ENST00000370110 PLA2R1Q13018 1463 aa29.4■■■□□ 2.3
NPM3-201ENST00000370110 IQSEC2Q5JU85 1478 aa29.4■■■□□ 2.3
NPM3-201ENST00000370110 RTEL1-TNFRSF6BF6WH68 1400 aa29.39■■■□□ 2.3
NPM3-201ENST00000370110 TCOF1Q13428 1488 aaKnown RBP29.38■■■□□ 2.29
NPM3-201ENST00000370110 ZNF335Q9H4Z2 1342 aaPredicted RBP29.38■■■□□ 2.29
NPM3-201ENST00000370110 DISP3Q9P2K9 1392 aa29.38■■■□□ 2.29
NPM3-201ENST00000370110 NCOA2Q15596 1464 aa29.36■■■□□ 2.29
NPM3-201ENST00000370110 DHX29Q7Z478 1369 aaKnown RBP29.36■■■□□ 2.29
NPM3-201ENST00000370110 CAMSAP2Q08AD1 1489 aa29.35■■■□□ 2.29
NPM3-201ENST00000370110 KANK4Q5T7N3 995 aaPredicted RBP29.34■■■□□ 2.29
NPM3-201ENST00000370110 ILDR2Q71H61 639 aa29.34■■■□□ 2.29
NPM3-201ENST00000370110 PPP6R1Q9UPN7 881 aa29.34■■■□□ 2.29
NPM3-201ENST00000370110 CCDC141Q6ZP82 1450 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms