RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 MSH5O43196 834 aa10.85□□□□□ -0.67
LCA5-201ENST00000369846 CHGAP10645 457 aaKnown RBP10.85□□□□□ -0.67
LCA5-201ENST00000369846 SIN3AQ96ST3 1273 aa10.84□□□□□ -0.67
LCA5-201ENST00000369846 TOP2AP11388 1531 aaKnown RBP10.83□□□□□ -0.68
LCA5-201ENST00000369846 NOC3LQ8WTT2 800 aaKnown RBP10.83□□□□□ -0.68
LCA5-201ENST00000369846 FOXD4L1Q9NU39 408 aa10.83□□□□□ -0.68
LCA5-201ENST00000369846 FGD1P98174 961 aa10.82□□□□□ -0.68
LCA5-201ENST00000369846 SETQ01105 290 aaPredicted RBP10.82□□□□□ -0.68
LCA5-201ENST00000369846 UBE2Q2Q8WVN8 375 aa10.81□□□□□ -0.68
LCA5-201ENST00000369846 PDE4AP27815 886 aa10.81□□□□□ -0.68
LCA5-201ENST00000369846 EEA1Q15075 1411 aa10.8□□□□□ -0.68
LCA5-201ENST00000369846 SYAP1Q96A49 352 aaPredicted RBP10.8□□□□□ -0.68
LCA5-201ENST00000369846 RBM10P98175 930 aaKnown RBP10.8□□□□□ -0.68
LCA5-201ENST00000369846 NAP1L2Q9ULW6 460 aaPredicted RBP10.8□□□□□ -0.68
LCA5-201ENST00000369846 CEP164Q9UPV0 1460 aa10.8□□□□□ -0.68
LCA5-201ENST00000369846 KCNJ4P48050 445 aa10.79□□□□□ -0.68
LCA5-201ENST00000369846 PDE4CQ08493 712 aa10.79□□□□□ -0.68
LCA5-201ENST00000369846 MFAP1P55081 439 aaKnown RBP10.79□□□□□ -0.68
LCA5-201ENST00000369846 R3HCC1Q9Y3T6 440 aaKnown RBP10.79□□□□□ -0.68
LCA5-201ENST00000369846 RCAN3Q9UKA8 241 aa10.78□□□□□ -0.68
LCA5-201ENST00000369846 DDX49Q9Y6V7 483 aaKnown RBP10.78□□□□□ -0.68
LCA5-201ENST00000369846 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.78□□□□□ -0.68
LCA5-201ENST00000369846 SYNJ1O43426 1573 aa10.78□□□□□ -0.68
LCA5-201ENST00000369846 KIF21BO75037 1637 aa10.78□□□□□ -0.68
LCA5-201ENST00000369846 MAP7D2Q96T17 732 aa10.77□□□□□ -0.68
LCA5-201ENST00000369846 ZMYND15Q9H091 742 aa10.77□□□□□ -0.69
LCA5-201ENST00000369846 NFKBIBQ15653 356 aa10.76□□□□□ -0.69
LCA5-201ENST00000369846 HTATSF1O43719 755 aaKnown RBP10.76□□□□□ -0.69
LCA5-201ENST00000369846 NPM1P06748 294 aaKnown RBP eCLIP10.76□□□□□ -0.69
LCA5-201ENST00000369846 PATL2C9JE40 543 aaKnown RBP10.76□□□□□ -0.69
LCA5-201ENST00000369846 DDX11L8A8MPP1 907 aa10.75□□□□□ -0.69
LCA5-201ENST00000369846 KNSTRNQ9Y448 316 aa10.75□□□□□ -0.69
LCA5-201ENST00000369846 ZNF592Q92610 1267 aa10.75□□□□□ -0.69
LCA5-201ENST00000369846 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.75□□□□□ -0.69
LCA5-201ENST00000369846 SMARCA4P51532 1647 aa10.75□□□□□ -0.69
LCA5-201ENST00000369846 CCAR2Q8N163 923 aaKnown RBP10.74□□□□□ -0.69
LCA5-201ENST00000369846 FOXD4L5Q5VV16 416 aaPredicted RBP10.74□□□□□ -0.69
LCA5-201ENST00000369846 FOXD4L4Q8WXT5 416 aaPredicted RBP10.74□□□□□ -0.69
LCA5-201ENST00000369846 RRP7BPQ9NSQ0 103 aa10.74□□□□□ -0.69
LCA5-201ENST00000369846 RRP9O43818 475 aaKnown RBP10.74□□□□□ -0.69
LCA5-201ENST00000369846 CC2D1BQ5T0F9 858 aaKnown RBP10.73□□□□□ -0.69
LCA5-201ENST00000369846 MTERF4Q7Z6M4 381 aaKnown RBP10.72□□□□□ -0.69
LCA5-201ENST00000369846 BCL11BQ9C0K0 894 aaPredicted RBP10.72□□□□□ -0.69
LCA5-201ENST00000369846 TEX35Q5T0J7 233 aa10.72□□□□□ -0.69
LCA5-201ENST00000369846 APBB1O00213 710 aa10.72□□□□□ -0.69
LCA5-201ENST00000369846 PAK3O75914 559 aaPredicted RBP10.72□□□□□ -0.69
LCA5-201ENST00000369846 MCCP23508 829 aa10.72□□□□□ -0.69
LCA5-201ENST00000369846 CSPP1Q1MSJ5 1256 aa10.72□□□□□ -0.69
LCA5-201ENST00000369846 CCDC66A2RUB6 948 aa10.71□□□□□ -0.69
LCA5-201ENST00000369846 MS4A1P11836 297 aa10.71□□□□□ -0.69
LCA5-201ENST00000369846 TPM2P07951 284 aa10.71□□□□□ -0.7
LCA5-201ENST00000369846 GNL2Q13823 731 aaKnown RBP10.71□□□□□ -0.7
LCA5-201ENST00000369846 CFAP53Q96M91 514 aa10.71□□□□□ -0.7
LCA5-201ENST00000369846 RAB3GAP2Q9H2M9 1393 aa10.7□□□□□ -0.7
LCA5-201ENST00000369846 RGL3Q3MIN7 710 aa10.7□□□□□ -0.7
LCA5-201ENST00000369846 GPS2Q13227 327 aa10.7□□□□□ -0.7
LCA5-201ENST00000369846 NUDCQ9Y266 331 aa10.7□□□□□ -0.7
LCA5-201ENST00000369846 CARD11Q9BXL7 1154 aa10.7□□□□□ -0.7
LCA5-201ENST00000369846 AEBP1Q8IUX7 1158 aa10.69□□□□□ -0.7
LCA5-201ENST00000369846 FOXD4L6Q3SYB3 417 aaPredicted RBP10.69□□□□□ -0.7
LCA5-201ENST00000369846 TAF7LQ5H9L4 462 aa10.69□□□□□ -0.7
LCA5-201ENST00000369846 FOXD4L3Q6VB84 417 aaPredicted RBP10.69□□□□□ -0.7
LCA5-201ENST00000369846 NOL8Q76FK4 1167 aaKnown RBP10.69□□□□□ -0.7
LCA5-201ENST00000369846 WDR97A6NE52 1622 aa10.68□□□□□ -0.7
LCA5-201ENST00000369846 U2SURPO15042 1029 aaKnown RBP10.68□□□□□ -0.7
LCA5-201ENST00000369846 ARAP1Q96P48 1450 aa10.68□□□□□ -0.7
LCA5-201ENST00000369846 SKOR2Q2VWA4 1001 aaPredicted RBP10.68□□□□□ -0.7
LCA5-201ENST00000369846 CHMP4BQ9H444 224 aaKnown RBP10.68□□□□□ -0.7
LCA5-201ENST00000369846 ESF1Q9H501 851 aaKnown RBP10.68□□□□□ -0.7
LCA5-201ENST00000369846 PPP1R15AO75807 674 aaPredicted RBP10.67□□□□□ -0.7
LCA5-201ENST00000369846 FAM161AQ3B820 660 aa10.67□□□□□ -0.7
LCA5-201ENST00000369846 NOM1Q5C9Z4 860 aaKnown RBP10.67□□□□□ -0.7
LCA5-201ENST00000369846 CCNB3Q8WWL7 1395 aa10.67□□□□□ -0.7
LCA5-201ENST00000369846 RWDD1Q9H446 243 aaPredicted RBP10.67□□□□□ -0.7
LCA5-201ENST00000369846 PHF14O94880 888 aa10.66□□□□□ -0.7
LCA5-201ENST00000369846 OS9Q13438 667 aaPredicted RBP10.66□□□□□ -0.7
LCA5-201ENST00000369846 MAPK8IP3Q9UPT6 1336 aa10.66□□□□□ -0.7
LCA5-201ENST00000369846 SENP3Q9H4L4 574 aaPredicted RBP10.66□□□□□ -0.7
LCA5-201ENST00000369846 MRE11P49959 708 aa10.65□□□□□ -0.7
LCA5-201ENST00000369846 FRAT2O75474 233 aaPredicted RBP10.65□□□□□ -0.7
LCA5-201ENST00000369846 PRDM10Q9NQV6 1147 aa10.65□□□□□ -0.71
LCA5-201ENST00000369846 MAPKBP1O60336 1514 aa10.64□□□□□ -0.71
LCA5-201ENST00000369846 EXOC6Q8TAG9 804 aa10.64□□□□□ -0.71
LCA5-201ENST00000369846 TPM4P67936 248 aa10.63□□□□□ -0.71
LCA5-201ENST00000369846 KIAA1211Q6ZU35 1233 aa10.63□□□□□ -0.71
LCA5-201ENST00000369846 CLUAP1Q96AJ1 413 aa10.63□□□□□ -0.71
LCA5-201ENST00000369846 STAG3Q9UJ98 1225 aa10.63□□□□□ -0.71
LCA5-201ENST00000369846 BBXQ8WY36 941 aaPredicted RBP10.63□□□□□ -0.71
LCA5-201ENST00000369846 CFAP44Q96MT7 982 aa10.62□□□□□ -0.71
LCA5-201ENST00000369846 TPM3P06753 285 aa10.62□□□□□ -0.71
LCA5-201ENST00000369846 NCBP3Q53F19 620 aaKnown RBP10.62□□□□□ -0.71
LCA5-201ENST00000369846 ZHX1Q9UKY1 873 aaPredicted RBP10.62□□□□□ -0.71
LCA5-201ENST00000369846 HSP90AB3PQ58FF7 597 aa10.61□□□□□ -0.71
LCA5-201ENST00000369846 CHMP5Q9NZZ3 219 aa10.61□□□□□ -0.71
LCA5-201ENST00000369846 BAZ1BQ9UIG0 1483 aaKnown RBP10.61□□□□□ -0.71
LCA5-201ENST00000369846 H0YHG0 523 aa10.61□□□□□ -0.71
LCA5-201ENST00000369846 NASPP49321 788 aaPredicted RBP10.61□□□□□ -0.71
LCA5-201ENST00000369846 DIAPH3Q9NSV4 1193 aa10.61□□□□□ -0.71
LCA5-201ENST00000369846 HSPA5P11021 654 aaKnown RBP10.61□□□□□ -0.71
LCA5-201ENST00000369846 RRBP1Q9P2E9 1410 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms