RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 GCC2Q8IWJ2 1684 aa25.05■■□□□ 1.6
PHGDH-202ENST00000369409 DAPK1P53355 1430 aa25.04■■□□□ 1.6
PHGDH-202ENST00000369409 RIMBP3CA6NJZ7 1639 aa25.03■■□□□ 1.6
PHGDH-202ENST00000369409 RIMBP3BA6NNM3 1639 aa25.03■■□□□ 1.6
PHGDH-202ENST00000369409 RIMBP3Q9UFD9 1639 aa25.03■■□□□ 1.6
PHGDH-202ENST00000369409 HFM1A2PYH4 1435 aa25.02■■□□□ 1.6
PHGDH-202ENST00000369409 WDR7Q9Y4E6 1490 aa25.02■■□□□ 1.6
PHGDH-202ENST00000369409 DHX57Q6P158 1386 aaKnown RBP25.01■■□□□ 1.59
PHGDH-202ENST00000369409 ZNF777Q9ULD5 760 aaPredicted RBP25■■□□□ 1.59
PHGDH-202ENST00000369409 ABCC5O15440 1437 aa25■■□□□ 1.59
PHGDH-202ENST00000369409 SAMD9LQ8IVG5 1584 aa24.99■■□□□ 1.59
PHGDH-202ENST00000369409 KCNH8Q96L42 1107 aa24.99■■□□□ 1.59
PHGDH-202ENST00000369409 ADGBQ8N7X0 1667 aa24.99■■□□□ 1.59
PHGDH-202ENST00000369409 NAIPQ13075 1403 aa24.98■■□□□ 1.59
PHGDH-202ENST00000369409 ARHGAP5Q13017 1502 aa24.98■■□□□ 1.59
PHGDH-202ENST00000369409 AKNAQ7Z591 1439 aa24.97■■□□□ 1.59
PHGDH-202ENST00000369409 CHIC2Q9UKJ5 165 aa24.96■■□□□ 1.59
PHGDH-202ENST00000369409 ASXL2Q76L83 1435 aa24.95■■□□□ 1.58
PHGDH-202ENST00000369409 ABCA9Q8IUA7 1624 aa24.91■■□□□ 1.58
PHGDH-202ENST00000369409 ARHGEF5Q12774 1597 aa24.91■■□□□ 1.58
PHGDH-202ENST00000369409 RRP7BPQ9NSQ0 103 aa24.89■■□□□ 1.58
PHGDH-202ENST00000369409 NPM1P06748 294 aaKnown RBP eCLIP24.89■■□□□ 1.57
PHGDH-202ENST00000369409 ROCK1Q13464 1354 aa24.89■■□□□ 1.57
PHGDH-202ENST00000369409 KDM6BO15054 1643 aa24.88■■□□□ 1.57
PHGDH-202ENST00000369409 SYCP2Q9BX26 1530 aa24.88■■□□□ 1.57
PHGDH-202ENST00000369409 PLCH2O75038 1416 aa24.87■■□□□ 1.57
PHGDH-202ENST00000369409 SHANK2Q9UPX8 1470 aa24.86■■□□□ 1.57
PHGDH-202ENST00000369409 ADGRL2O95490 1459 aa24.85■■□□□ 1.57
PHGDH-202ENST00000369409 MBD5Q9P267 1494 aa24.85■■□□□ 1.57
PHGDH-202ENST00000369409 ARAP3Q8WWN8 1544 aa24.84■■□□□ 1.57
PHGDH-202ENST00000369409 MAPKBP1O60336 1514 aa24.83■■□□□ 1.57
PHGDH-202ENST00000369409 CLSPNQ9HAW4 1339 aa24.83■■□□□ 1.57
PHGDH-202ENST00000369409 CCDC141Q6ZP82 1450 aa24.83■■□□□ 1.57
PHGDH-202ENST00000369409 CYB5RLQ6IPT4 315 aa24.81■■□□□ 1.56
PHGDH-202ENST00000369409 PLEKHH2Q8IVE3 1493 aa24.81■■□□□ 1.56
PHGDH-202ENST00000369409 C9orf84Q5VXU9 1444 aa24.81■■□□□ 1.56
PHGDH-202ENST00000369409 ABCC1P33527 1531 aa24.8■■□□□ 1.56
PHGDH-202ENST00000369409 HNRNPMP52272 730 aaKnown RBP eCLIP24.8■■□□□ 1.561e-6■■■■□ 22.8
PHGDH-202ENST00000369409 NCOA1Q15788 1441 aa24.78■■□□□ 1.56
PHGDH-202ENST00000369409 KIAA1107Q9UPP5 1409 aa24.76■■□□□ 1.55
PHGDH-202ENST00000369409 ANKRD30AQ9BXX3 1397 aa24.76■■□□□ 1.55
PHGDH-202ENST00000369409 EFCAB2Q5VUJ9 269 aa24.75■■□□□ 1.55
PHGDH-202ENST00000369409 MAST1Q9Y2H9 1570 aa24.75■■□□□ 1.55
PHGDH-202ENST00000369409 ARHGEF12Q9NZN5 1544 aa24.75■■□□□ 1.55
PHGDH-202ENST00000369409 FANCAO15360 1455 aa24.72■■□□□ 1.55
PHGDH-202ENST00000369409 TSPY4P0CV99 314 aa24.71■■□□□ 1.55
PHGDH-202ENST00000369409 TSPY10P0CW01 314 aa24.71■■□□□ 1.55
PHGDH-202ENST00000369409 RSPH4AQ5TD94 716 aa24.7■■□□□ 1.54
PHGDH-202ENST00000369409 PLXNC1O60486 1568 aa24.67■■□□□ 1.54
PHGDH-202ENST00000369409 CFAP74Q9C0B2 1584 aa24.67■■□□□ 1.54
PHGDH-202ENST00000369409 KIF15Q9NS87 1388 aa24.65■■□□□ 1.54
PHGDH-202ENST00000369409 ANKRD50Q9ULJ7 1429 aa24.64■■□□□ 1.54
PHGDH-202ENST00000369409 TRAPPC8Q9Y2L5 1435 aa24.64■■□□□ 1.54
PHGDH-202ENST00000369409 TRIM52Q96A61 297 aa24.64■■□□□ 1.53
PHGDH-202ENST00000369409 CD109Q6YHK3 1445 aa24.63■■□□□ 1.53
PHGDH-202ENST00000369409 ADGRL1O94910 1474 aa24.63■■□□□ 1.53
PHGDH-202ENST00000369409 MAP3K4Q9Y6R4 1608 aa24.61■■□□□ 1.53
PHGDH-202ENST00000369409 DENND4BO75064 1496 aaPredicted RBP24.6■■□□□ 1.53
PHGDH-202ENST00000369409 ACIN1Q9UKV3 1341 aaKnown RBP24.58■■□□□ 1.53
PHGDH-202ENST00000369409 GLI2P10070 1586 aa24.58■■□□□ 1.53
PHGDH-202ENST00000369409 DIP2BQ9P265 1576 aa24.58■■□□□ 1.53
PHGDH-202ENST00000369409 ZFYVE16Q7Z3T8 1539 aa24.58■■□□□ 1.52
PHGDH-202ENST00000369409 INO80Q9ULG1 1556 aaPredicted RBP24.56■■□□□ 1.52
PHGDH-202ENST00000369409 SCAPERQ9BY12 1400 aa24.56■■□□□ 1.52
PHGDH-202ENST00000369409 PZPP20742 1482 aa24.53■■□□□ 1.52
PHGDH-202ENST00000369409 DUOX2Q9NRD8 1548 aa24.53■■□□□ 1.52
PHGDH-202ENST00000369409 SIN3AQ96ST3 1273 aa24.52■■□□□ 1.52
PHGDH-202ENST00000369409 MPHOSPH9Q99550 1183 aa24.52■■□□□ 1.52
PHGDH-202ENST00000369409 ATP7AQ04656 1500 aa24.52■■□□□ 1.52
PHGDH-202ENST00000369409 AFAP1Q8N556 730 aa24.51■■□□□ 1.51
PHGDH-202ENST00000369409 SPAG9O60271 1321 aaKnown RBP24.51■■□□□ 1.51
PHGDH-202ENST00000369409 KDM5DQ9BY66 1539 aa24.5■■□□□ 1.51
PHGDH-202ENST00000369409 RTEL1-TNFRSF6BF6WH68 1400 aa24.5■■□□□ 1.51
PHGDH-202ENST00000369409 UNC13BO14795 1591 aa24.49■■□□□ 1.51
PHGDH-202ENST00000369409 NEO1Q92859 1461 aa24.48■■□□□ 1.51
PHGDH-202ENST00000369409 NEUROD1Q13562 356 aa24.48■■□□□ 1.51
PHGDH-202ENST00000369409 ZNF518AQ6AHZ1 1483 aa24.47■■□□□ 1.51
PHGDH-202ENST00000369409 ERBINQ96RT1 1412 aa24.46■■□□□ 1.51
PHGDH-202ENST00000369409 TSPOAP1O95153 1857 aa24.46■■□□□ 1.51
PHGDH-202ENST00000369409 SLC4A1APQ9BWU0 796 aaKnown RBP24.45■■□□□ 1.51
PHGDH-202ENST00000369409 POGZQ7Z3K3 1410 aa24.45■■□□□ 1.5
PHGDH-202ENST00000369409 KIDINS220Q9ULH0 1771 aa24.45■■□□□ 1.5
PHGDH-202ENST00000369409 KDM5CP41229 1560 aa24.45■■□□□ 1.5
PHGDH-202ENST00000369409 KIF13AQ9H1H9 1805 aa24.44■■□□□ 1.5
PHGDH-202ENST00000369409 NUP155O75694 1391 aa24.43■■□□□ 1.5
PHGDH-202ENST00000369409 PPRC1Q5VV67 1664 aaKnown RBP24.43■■□□□ 1.5
PHGDH-202ENST00000369409 FAM69CQ0P6D2 419 aa24.41■■□□□ 1.5
PHGDH-202ENST00000369409 FOXD1Q16676 465 aa24.41■■□□□ 1.5
PHGDH-202ENST00000369409 HECW2Q9P2P5 1572 aa24.4■■□□□ 1.5
PHGDH-202ENST00000369409 RICTORQ6R327 1708 aa24.39■■□□□ 1.5
PHGDH-202ENST00000369409 FAM135AQ9P2D6 1515 aa24.39■■□□□ 1.49
PHGDH-202ENST00000369409 IQGAP3Q86VI3 1631 aa24.38■■□□□ 1.49
PHGDH-202ENST00000369409 MAGI2Q86UL8 1455 aa24.38■■□□□ 1.49
PHGDH-202ENST00000369409 MYT1LQ9UL68 1186 aa24.36■■□□□ 1.49
PHGDH-202ENST00000369409 ANKRD30BQ9BXX2 1392 aa24.36■■□□□ 1.49
PHGDH-202ENST00000369409 TONSLQ96HA7 1378 aa24.35■■□□□ 1.49
PHGDH-202ENST00000369409 EIF2AK4Q9P2K8 1649 aaKnown RBP24.35■■□□□ 1.49
PHGDH-202ENST00000369409 DEPDC5O75140 1603 aa24.34■■□□□ 1.49
PHGDH-202ENST00000369409 TIMELESSQ9UNS1 1208 aa24.34■■□□□ 1.49
PHGDH-202ENST00000369409 MLH3Q9UHC1 1453 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms