RNA–Protein interactions for RNA: ENST00000368926.5

C1orf56-201, Transcript of chromosome 1 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1orf56, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf56-201ENST00000368926 TTC37Q6PGP7 1564 aa25.17■■□□□ 1.62
C1orf56-201ENST00000368926 SUPT6HQ7KZ85 1726 aaKnown RBP25.15■■□□□ 1.62
C1orf56-201ENST00000368926 MAP3K4Q9Y6R4 1608 aa25.14■■□□□ 1.61
C1orf56-201ENST00000368926 NCOA2Q15596 1464 aa25.13■■□□□ 1.61
C1orf56-201ENST00000368926 TRHP20396 242 aaPredicted RBP25.13■■□□□ 1.61
C1orf56-201ENST00000368926 CD109Q6YHK3 1445 aa25.08■■□□□ 1.61
C1orf56-201ENST00000368926 RRBP1Q9P2E9 1410 aaKnown RBP25.08■■□□□ 1.61
C1orf56-201ENST00000368926 CDC42BPAQ5VT25 1732 aa25.05■■□□□ 1.6
C1orf56-201ENST00000368926 MYO5CQ9NQX4 1742 aa25.05■■□□□ 1.6
C1orf56-201ENST00000368926 GPATCH8Q9UKJ3 1502 aaKnown RBP25.04■■□□□ 1.6
C1orf56-201ENST00000368926 CCNB3Q8WWL7 1395 aa25.04■■□□□ 1.6
C1orf56-201ENST00000368926 PPRC1Q5VV67 1664 aaKnown RBP25.04■■□□□ 1.6
C1orf56-201ENST00000368926 PLCH2O75038 1416 aa25.03■■□□□ 1.6
C1orf56-201ENST00000368926 TSPOAP1O95153 1857 aa25.02■■□□□ 1.6
C1orf56-201ENST00000368926 PREX2Q70Z35 1606 aa25.02■■□□□ 1.6
C1orf56-201ENST00000368926 PHLDB1Q86UU1 1377 aa25.02■■□□□ 1.6
C1orf56-201ENST00000368926 CDC42BPBQ9Y5S2 1711 aa25.01■■□□□ 1.59
C1orf56-201ENST00000368926 ARAP3Q8WWN8 1544 aa25■■□□□ 1.59
C1orf56-201ENST00000368926 ITSN2Q9NZM3 1697 aa24.99■■□□□ 1.59
C1orf56-201ENST00000368926 MYOM3Q5VTT5 1437 aa24.97■■□□□ 1.59
C1orf56-201ENST00000368926 ARHGAP5Q13017 1502 aa24.96■■□□□ 1.59
C1orf56-201ENST00000368926 FANCAO15360 1455 aa24.94■■□□□ 1.58
C1orf56-201ENST00000368926 TEX14Q8IWB6 1497 aa24.93■■□□□ 1.58
C1orf56-201ENST00000368926 CFDP1Q9UEE9 299 aaPredicted RBP24.92■■□□□ 1.58
C1orf56-201ENST00000368926 EFCAB2Q5VUJ9 269 aa24.9■■□□□ 1.58
C1orf56-201ENST00000368926 CFAP74Q9C0B2 1584 aa24.9■■□□□ 1.58
C1orf56-201ENST00000368926 NEO1Q92859 1461 aa24.9■■□□□ 1.58
C1orf56-201ENST00000368926 MIA2Q96PC5 1412 aa24.89■■□□□ 1.57
C1orf56-201ENST00000368926 FGD6Q6ZV73 1430 aa24.88■■□□□ 1.57
C1orf56-201ENST00000368926 SAMD9LQ8IVG5 1584 aa24.88■■□□□ 1.57
C1orf56-201ENST00000368926 SUPT16HQ9Y5B9 1047 aaKnown RBP24.88■■□□□ 1.57
C1orf56-201ENST00000368926 AKNAQ7Z591 1439 aa24.86■■□□□ 1.57
C1orf56-201ENST00000368926 ZNF644Q9H582 1327 aaPredicted RBP24.86■■□□□ 1.57
C1orf56-201ENST00000368926 ZNF777Q9ULD5 760 aaPredicted RBP24.85■■□□□ 1.57
C1orf56-201ENST00000368926 PTPN23Q9H3S7 1636 aa24.83■■□□□ 1.57
C1orf56-201ENST00000368926 CAMSAP2Q08AD1 1489 aa24.83■■□□□ 1.57
C1orf56-201ENST00000368926 ABCC1P33527 1531 aa24.82■■□□□ 1.56
C1orf56-201ENST00000368926 ADGRL1O94910 1474 aa24.81■■□□□ 1.56
C1orf56-201ENST00000368926 TCOF1Q13428 1488 aaKnown RBP24.81■■□□□ 1.56
C1orf56-201ENST00000368926 ARHGEF12Q9NZN5 1544 aa24.8■■□□□ 1.56
C1orf56-201ENST00000368926 PLEKHH2Q8IVE3 1493 aa24.78■■□□□ 1.56
C1orf56-201ENST00000368926 SYCP2Q9BX26 1530 aa24.78■■□□□ 1.56
C1orf56-201ENST00000368926 SCAPERQ9BY12 1400 aa24.77■■□□□ 1.56
C1orf56-201ENST00000368926 KIAA1107Q9UPP5 1409 aa24.77■■□□□ 1.56
C1orf56-201ENST00000368926 COL17A1Q9UMD9 1497 aaPredicted RBP24.77■■□□□ 1.56
C1orf56-201ENST00000368926 MBD5Q9P267 1494 aa24.75■■□□□ 1.55
C1orf56-201ENST00000368926 HNRNPMP52272 730 aaKnown RBP eCLIP24.74■■□□□ 1.55
C1orf56-201ENST00000368926 DENND4BO75064 1496 aaPredicted RBP24.72■■□□□ 1.55
C1orf56-201ENST00000368926 TRAPPC8Q9Y2L5 1435 aa24.72■■□□□ 1.55
C1orf56-201ENST00000368926 FAM50AQ14320 339 aaKnown RBP24.71■■□□□ 1.55
C1orf56-201ENST00000368926 POGZQ7Z3K3 1410 aa24.71■■□□□ 1.55
C1orf56-201ENST00000368926 FRMPD1Q5SYB0 1578 aa24.71■■□□□ 1.55
C1orf56-201ENST00000368926 RICTORQ6R327 1708 aa24.71■■□□□ 1.55
C1orf56-201ENST00000368926 KDM6BO15054 1643 aa24.7■■□□□ 1.55
C1orf56-201ENST00000368926 ARHGEF5Q12774 1597 aa24.7■■□□□ 1.54
C1orf56-201ENST00000368926 RAB3GAP2Q9H2M9 1393 aa24.7■■□□□ 1.54
C1orf56-201ENST00000368926 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.7■■□□□ 1.54
C1orf56-201ENST00000368926 RAPGEF3O95398 923 aa24.69■■□□□ 1.54
C1orf56-201ENST00000368926 ZNF518AQ6AHZ1 1483 aa24.67■■□□□ 1.54
C1orf56-201ENST00000368926 DNMT1P26358 1616 aaKnown RBP24.66■■□□□ 1.54
C1orf56-201ENST00000368926 AFAP1Q8N556 730 aa24.66■■□□□ 1.54
C1orf56-201ENST00000368926 CCDC141Q6ZP82 1450 aa24.66■■□□□ 1.54
C1orf56-201ENST00000368926 KDM5CP41229 1560 aa24.65■■□□□ 1.54
C1orf56-201ENST00000368926 ABCC5O15440 1437 aa24.64■■□□□ 1.54
C1orf56-201ENST00000368926 SETD5Q9C0A6 1442 aa24.64■■□□□ 1.53
C1orf56-201ENST00000368926 DAPK1P53355 1430 aa24.63■■□□□ 1.53
C1orf56-201ENST00000368926 RSPH4AQ5TD94 716 aa24.63■■□□□ 1.53
C1orf56-201ENST00000368926 CROCC2H7BZ55 1655 aa24.62■■□□□ 1.53
C1orf56-201ENST00000368926 ZMYM4Q5VZL5 1548 aa24.61■■□□□ 1.53
C1orf56-201ENST00000368926 ITGAEP38570 1179 aa24.58■■□□□ 1.53
C1orf56-201ENST00000368926 PTPRKQ15262 1439 aa24.58■■□□□ 1.53
C1orf56-201ENST00000368926 TSHZ2Q9NRE2 1034 aa24.58■■□□□ 1.53
C1orf56-201ENST00000368926 SHANK2Q9UPX8 1470 aa24.57■■□□□ 1.52
C1orf56-201ENST00000368926 INO80Q9ULG1 1556 aaPredicted RBP24.57■■□□□ 1.52
C1orf56-201ENST00000368926 HECW2Q9P2P5 1572 aa24.56■■□□□ 1.52
C1orf56-201ENST00000368926 MAST1Q9Y2H9 1570 aa24.56■■□□□ 1.52
C1orf56-201ENST00000368926 SPAG9O60271 1321 aaKnown RBP24.56■■□□□ 1.52
C1orf56-201ENST00000368926 MLH3Q9UHC1 1453 aa24.56■■□□□ 1.52
C1orf56-201ENST00000368926 TIMELESSQ9UNS1 1208 aa24.55■■□□□ 1.52
C1orf56-201ENST00000368926 C9orf84Q5VXU9 1444 aa24.55■■□□□ 1.52
C1orf56-201ENST00000368926 ZFYVE16Q7Z3T8 1539 aa24.55■■□□□ 1.52
C1orf56-201ENST00000368926 KIDINS220Q9ULH0 1771 aa24.54■■□□□ 1.52
C1orf56-201ENST00000368926 ATP7AQ04656 1500 aa24.54■■□□□ 1.52
C1orf56-201ENST00000368926 TSPY4P0CV99 314 aa24.54■■□□□ 1.52
C1orf56-201ENST00000368926 TSPY10P0CW01 314 aa24.54■■□□□ 1.52
C1orf56-201ENST00000368926 RTEL1-TNFRSF6BF6WH68 1400 aa24.53■■□□□ 1.52
C1orf56-201ENST00000368926 MAGI2Q86UL8 1455 aa24.52■■□□□ 1.52
C1orf56-201ENST00000368926 YEATS2Q9ULM3 1422 aa24.5■■□□□ 1.51
C1orf56-201ENST00000368926 CHIC2Q9UKJ5 165 aa24.5■■□□□ 1.51
C1orf56-201ENST00000368926 ABCA6Q8N139 1617 aa24.49■■□□□ 1.51
C1orf56-201ENST00000368926 ADGBQ8N7X0 1667 aa24.48■■□□□ 1.51
C1orf56-201ENST00000368926 ADGRL2O95490 1459 aa24.48■■□□□ 1.51
C1orf56-201ENST00000368926 ARHGEF40Q8TER5 1519 aa24.47■■□□□ 1.51
C1orf56-201ENST00000368926 DIP2CQ9Y2E4 1556 aa24.47■■□□□ 1.51
C1orf56-201ENST00000368926 MYT1LQ9UL68 1186 aa24.47■■□□□ 1.51
C1orf56-201ENST00000368926 PLXNC1O60486 1568 aa24.46■■□□□ 1.51
C1orf56-201ENST00000368926 NCOA1Q15788 1441 aa24.44■■□□□ 1.5
C1orf56-201ENST00000368926 ROCK1Q13464 1354 aa24.43■■□□□ 1.5
C1orf56-201ENST00000368926 ANKRD30AQ9BXX3 1397 aa24.43■■□□□ 1.5
C1orf56-201ENST00000368926 ATP10AO60312 1499 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms