RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 DIP2BQ9P265 1576 aa39.15■■■■□ 3.86
EFNA1-202ENST00000368407 FAM69CQ0P6D2 419 aa39.14■■■■□ 3.86
EFNA1-202ENST00000368407 CFDP1Q9UEE9 299 aaPredicted RBP39.14■■■■□ 3.86
EFNA1-202ENST00000368407 ITSN2Q9NZM3 1697 aa39.1■■■■□ 3.85
EFNA1-202ENST00000368407 PLCH2O75038 1416 aa39.1■■■■□ 3.85
EFNA1-202ENST00000368407 MIA2Q96PC5 1412 aa39.1■■■■□ 3.85
EFNA1-202ENST00000368407 PREX2Q70Z35 1606 aa39.09■■■■□ 3.85
EFNA1-202ENST00000368407 GLI2P10070 1586 aa39.08■■■■□ 3.85
EFNA1-202ENST00000368407 MYO5CQ9NQX4 1742 aa39.08■■■■□ 3.85
EFNA1-202ENST00000368407 CD109Q6YHK3 1445 aa39.07■■■■□ 3.84
EFNA1-202ENST00000368407 ZNF644Q9H582 1327 aaPredicted RBP39.06■■■■□ 3.84
EFNA1-202ENST00000368407 CDC42BPBQ9Y5S2 1711 aa39.06■■■■□ 3.84
EFNA1-202ENST00000368407 FAM50AQ14320 339 aaKnown RBP39.05■■■■□ 3.84
EFNA1-202ENST00000368407 ZNF777Q9ULD5 760 aaPredicted RBP39.05■■■■□ 3.84
EFNA1-202ENST00000368407 ARHGAP5Q13017 1502 aa39.03■■■■□ 3.84
EFNA1-202ENST00000368407 PTPN23Q9H3S7 1636 aa39.03■■■■□ 3.84
EFNA1-202ENST00000368407 GTF3C3Q9Y5Q9 886 aa39.01■■■■□ 3.83
EFNA1-202ENST00000368407 TCOF1Q13428 1488 aaKnown RBP38.98■■■■□ 3.83
EFNA1-202ENST00000368407 MAP3K4Q9Y6R4 1608 aa38.98■■■■□ 3.83
EFNA1-202ENST00000368407 KIF13AQ9H1H9 1805 aa38.97■■■■□ 3.83
EFNA1-202ENST00000368407 ARAP3Q8WWN8 1544 aa38.96■■■■□ 3.83
EFNA1-202ENST00000368407 EFCAB2Q5VUJ9 269 aa38.95■■■■□ 3.83
EFNA1-202ENST00000368407 CAMSAP2Q08AD1 1489 aa38.95■■■■□ 3.83
EFNA1-202ENST00000368407 FANCAO15360 1455 aa38.91■■■■□ 3.82
EFNA1-202ENST00000368407 SAMD9LQ8IVG5 1584 aa38.91■■■■□ 3.82
EFNA1-202ENST00000368407 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.91■■■■□ 3.82
EFNA1-202ENST00000368407 TRHP20396 242 aaPredicted RBP38.87■■■■□ 3.81
EFNA1-202ENST00000368407 ITGAEP38570 1179 aa38.87■■■■□ 3.81
EFNA1-202ENST00000368407 MYT1Q01538 1121 aa38.85■■■■□ 3.81
EFNA1-202ENST00000368407 HNRNPMP52272 730 aaKnown RBP eCLIP38.82■■■■□ 3.8
EFNA1-202ENST00000368407 TSPOAP1O95153 1857 aa38.8■■■■□ 3.8
EFNA1-202ENST00000368407 CLSPNQ9HAW4 1339 aa38.78■■■■□ 3.8
EFNA1-202ENST00000368407 AKNAQ7Z591 1439 aa38.78■■■■□ 3.8
EFNA1-202ENST00000368407 PPRC1Q5VV67 1664 aaKnown RBP38.78■■■■□ 3.8
EFNA1-202ENST00000368407 SYCP2Q9BX26 1530 aa38.78■■■■□ 3.8
EFNA1-202ENST00000368407 ARHGEF12Q9NZN5 1544 aa38.77■■■■□ 3.8
EFNA1-202ENST00000368407 MBD5Q9P267 1494 aa38.77■■■■□ 3.8
EFNA1-202ENST00000368407 ABCC1P33527 1531 aa38.76■■■■□ 3.8
EFNA1-202ENST00000368407 KIAA1107Q9UPP5 1409 aa38.75■■■■□ 3.79
EFNA1-202ENST00000368407 PLEKHH2Q8IVE3 1493 aa38.75■■■■□ 3.79
EFNA1-202ENST00000368407 PTPRKQ15262 1439 aa38.74■■■■□ 3.79
EFNA1-202ENST00000368407 ADGRL1O94910 1474 aa38.73■■■■□ 3.79
EFNA1-202ENST00000368407 NEO1Q92859 1461 aa38.73■■■■□ 3.79
EFNA1-202ENST00000368407 ABCC5O15440 1437 aa38.73■■■■□ 3.79
EFNA1-202ENST00000368407 DAPK1P53355 1430 aa38.72■■■■□ 3.79
EFNA1-202ENST00000368407 CFAP74Q9C0B2 1584 aa38.71■■■■□ 3.79
EFNA1-202ENST00000368407 DNMT1P26358 1616 aaKnown RBP38.7■■■■□ 3.79
EFNA1-202ENST00000368407 SCAPERQ9BY12 1400 aa38.7■■■■□ 3.79
EFNA1-202ENST00000368407 TEX14Q8IWB6 1497 aa38.69■■■■□ 3.78
EFNA1-202ENST00000368407 TRAPPC8Q9Y2L5 1435 aa38.66■■■■□ 3.78
EFNA1-202ENST00000368407 ARHGEF5Q12774 1597 aa38.66■■■■□ 3.78
EFNA1-202ENST00000368407 CHIC2Q9UKJ5 165 aa38.64■■■■□ 3.78
EFNA1-202ENST00000368407 CCDC141Q6ZP82 1450 aa38.63■■■■□ 3.78
EFNA1-202ENST00000368407 RSPH4AQ5TD94 716 aa38.61■■■■□ 3.77
EFNA1-202ENST00000368407 AFAP1Q8N556 730 aa38.61■■■■□ 3.77
EFNA1-202ENST00000368407 TSPY4P0CV99 314 aa38.55■■■■□ 3.76
EFNA1-202ENST00000368407 TSPY10P0CW01 314 aa38.55■■■■□ 3.76
EFNA1-202ENST00000368407 CROCC2H7BZ55 1655 aa38.55■■■■□ 3.76
EFNA1-202ENST00000368407 C9orf84Q5VXU9 1444 aa38.53■■■■□ 3.76
EFNA1-202ENST00000368407 RAPGEF3O95398 923 aa38.53■■■■□ 3.76
EFNA1-202ENST00000368407 POGZQ7Z3K3 1410 aa38.53■■■■□ 3.76
EFNA1-202ENST00000368407 DENND4BO75064 1496 aaPredicted RBP38.52■■■■□ 3.76
EFNA1-202ENST00000368407 SHANK2Q9UPX8 1470 aa38.51■■■■□ 3.76
EFNA1-202ENST00000368407 ZNF518AQ6AHZ1 1483 aa38.49■■■■□ 3.75
EFNA1-202ENST00000368407 RRP7BPQ9NSQ0 103 aa38.47■■■■□ 3.75
EFNA1-202ENST00000368407 COL17A1Q9UMD9 1497 aaPredicted RBP38.46■■■■□ 3.75
EFNA1-202ENST00000368407 MIER1Q8N108 512 aa38.46■■■■□ 3.75
EFNA1-202ENST00000368407 SPAG9O60271 1321 aaKnown RBP38.44■■■■□ 3.74
EFNA1-202ENST00000368407 ROCK1Q13464 1354 aa38.42■■■■□ 3.74
EFNA1-202ENST00000368407 ADGRL2O95490 1459 aa38.42■■■■□ 3.74
EFNA1-202ENST00000368407 NCOA1Q15788 1441 aa38.41■■■■□ 3.74
EFNA1-202ENST00000368407 MAST1Q9Y2H9 1570 aa38.41■■■■□ 3.74
EFNA1-202ENST00000368407 KDM5CP41229 1560 aa38.4■■■■□ 3.74
EFNA1-202ENST00000368407 FRMPD1Q5SYB0 1578 aa38.4■■■■□ 3.74
EFNA1-202ENST00000368407 RICTORQ6R327 1708 aa38.4■■■■□ 3.74
EFNA1-202ENST00000368407 ANKRD30AQ9BXX3 1397 aa38.39■■■■□ 3.74
EFNA1-202ENST00000368407 HFM1A2PYH4 1435 aa38.37■■■■□ 3.73
EFNA1-202ENST00000368407 ZFYVE16Q7Z3T8 1539 aa38.37■■■■□ 3.73
EFNA1-202ENST00000368407 ADGBQ8N7X0 1667 aa38.36■■■■□ 3.73
EFNA1-202ENST00000368407 NAIPQ13075 1403 aa38.36■■■■□ 3.73
EFNA1-202ENST00000368407 MYT1LQ9UL68 1186 aa38.35■■■■□ 3.73
EFNA1-202ENST00000368407 RTEL1-TNFRSF6BF6WH68 1400 aa38.34■■■■□ 3.73
EFNA1-202ENST00000368407 DHX57Q6P158 1386 aaKnown RBP38.34■■■■□ 3.73
EFNA1-202ENST00000368407 INO80Q9ULG1 1556 aaPredicted RBP38.33■■■■□ 3.73
EFNA1-202ENST00000368407 ATP7AQ04656 1500 aa38.33■■■■□ 3.73
EFNA1-202ENST00000368407 SETD5Q9C0A6 1442 aa38.31■■■■□ 3.72
EFNA1-202ENST00000368407 KIF15Q9NS87 1388 aa38.31■■■■□ 3.72
EFNA1-202ENST00000368407 MLH3Q9UHC1 1453 aa38.3■■■■□ 3.72
EFNA1-202ENST00000368407 HECW2Q9P2P5 1572 aa38.28■■■■□ 3.72
EFNA1-202ENST00000368407 KIDINS220Q9ULH0 1771 aa38.28■■■■□ 3.72
EFNA1-202ENST00000368407 PLXNC1O60486 1568 aa38.26■■■■□ 3.72
EFNA1-202ENST00000368407 RAB3GAP2Q9H2M9 1393 aa38.25■■■■□ 3.71
EFNA1-202ENST00000368407 ZMYM4Q5VZL5 1548 aa38.24■■■■□ 3.71
EFNA1-202ENST00000368407 GCC2Q8IWJ2 1684 aa38.23■■■■□ 3.71
EFNA1-202ENST00000368407 KDM6BO15054 1643 aa38.21■■■■□ 3.71
EFNA1-202ENST00000368407 YEATS2Q9ULM3 1422 aa38.2■■■■□ 3.71
EFNA1-202ENST00000368407 YTHDC1Q96MU7 727 aaKnown RBP38.18■■■■□ 3.7
EFNA1-202ENST00000368407 ANKRD50Q9ULJ7 1429 aa38.18■■■■□ 3.7
EFNA1-202ENST00000368407 ABCA6Q8N139 1617 aa38.15■■■■□ 3.7
EFNA1-202ENST00000368407 DUOX2Q9NRD8 1548 aa38.14■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms