RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 CFAP53Q96M91 514 aa11.26□□□□□ -0.61
SSR2-202ENST00000368311 SETD5Q9C0A6 1442 aa11.26□□□□□ -0.61
SSR2-202ENST00000368311 RRP7BPQ9NSQ0 103 aa11.26□□□□□ -0.61
SSR2-202ENST00000368311 ERICH6Q7L0X2 663 aa11.25□□□□□ -0.61
SSR2-202ENST00000368311 VGFO15240 615 aaPredicted RBP11.25□□□□□ -0.61
SSR2-202ENST00000368311 KIF21AQ7Z4S6 1674 aa11.25□□□□□ -0.61
SSR2-202ENST00000368311 A0A0G2JS52 829 aa11.24□□□□□ -0.61
SSR2-202ENST00000368311 EHBP1L1Q8N3D4 1523 aa11.23□□□□□ -0.61
SSR2-202ENST00000368311 DENND4BO75064 1496 aaPredicted RBP11.23□□□□□ -0.61
SSR2-202ENST00000368311 PHF23Q9BUL5 403 aaPredicted RBP11.22□□□□□ -0.61
SSR2-202ENST00000368311 TROQ12816 1431 aaPredicted RBP11.22□□□□□ -0.61
SSR2-202ENST00000368311 TIMELESSQ9UNS1 1208 aa11.22□□□□□ -0.61
SSR2-202ENST00000368311 FANCAO15360 1455 aa11.21□□□□□ -0.61
SSR2-202ENST00000368311 HDGFL2Q7Z4V5 671 aaPredicted RBP11.21□□□□□ -0.61
SSR2-202ENST00000368311 EIF4G3O43432 1585 aaKnown RBP11.21□□□□□ -0.62
SSR2-202ENST00000368311 ANP32CO43423 234 aa11.2□□□□□ -0.62
SSR2-202ENST00000368311 ATF3P18847 181 aa11.2□□□□□ -0.62
SSR2-202ENST00000368311 KIF14Q15058 1648 aa11.2□□□□□ -0.62
SSR2-202ENST00000368311 ANKLE2Q86XL3 938 aa11.2□□□□□ -0.62
SSR2-202ENST00000368311 ADAMTS12P58397 1594 aa11.2□□□□□ -0.62
SSR2-202ENST00000368311 CFAP74Q9C0B2 1584 aa11.19□□□□□ -0.62
SSR2-202ENST00000368311 CNTLNQ9NXG0 1405 aa11.18□□□□□ -0.62
SSR2-202ENST00000368311 CLSPNQ9HAW4 1339 aa11.18□□□□□ -0.62
SSR2-202ENST00000368311 HNRNPMP52272 730 aaKnown RBP eCLIP11.17□□□□□ -0.62
SSR2-202ENST00000368311 NUP155O75694 1391 aa11.17□□□□□ -0.62
SSR2-202ENST00000368311 LMOD2Q6P5Q4 547 aa11.17□□□□□ -0.62
SSR2-202ENST00000368311 NUDCQ9Y266 331 aa11.17□□□□□ -0.62
SSR2-202ENST00000368311 MIA2Q96PC5 1412 aa11.16□□□□□ -0.62
SSR2-202ENST00000368311 PSME1Q06323 249 aa11.15□□□□□ -0.62
SSR2-202ENST00000368311 WASHC2AQ641Q2 1341 aa11.15□□□□□ -0.62
SSR2-202ENST00000368311 TMX4Q9H1E5 349 aaPredicted RBP11.15□□□□□ -0.63
SSR2-202ENST00000368311 ZNF608Q9ULD9 1512 aaPredicted RBP11.14□□□□□ -0.63
SSR2-202ENST00000368311 ZBTB7CA1YPR0 619 aa11.14□□□□□ -0.63
SSR2-202ENST00000368311 WDR7Q9Y4E6 1490 aa11.14□□□□□ -0.63
SSR2-202ENST00000368311 SLC52A1Q9NWF4 448 aa11.14□□□□□ -0.63
SSR2-202ENST00000368311 NCOA2Q15596 1464 aa11.14□□□□□ -0.63
SSR2-202ENST00000368311 KDM2AQ9Y2K7 1162 aa11.14□□□□□ -0.63
SSR2-202ENST00000368311 SCAPERQ9BY12 1400 aa11.14□□□□□ -0.63
SSR2-202ENST00000368311 PRXQ9BXM0 1461 aa11.13□□□□□ -0.63
SSR2-202ENST00000368311 SF3B2Q13435 895 aaKnown RBP11.13□□□□□ -0.63
SSR2-202ENST00000368311 NUP160Q12769 1436 aa11.13□□□□□ -0.63
SSR2-202ENST00000368311 TMF1P82094 1093 aa11.12□□□□□ -0.63
SSR2-202ENST00000368311 ADGRL1O94910 1474 aa11.12□□□□□ -0.63
SSR2-202ENST00000368311 THOC2Q8NI27 1593 aaKnown RBP11.12□□□□□ -0.63
SSR2-202ENST00000368311 CCDC9Q9Y3X0 531 aaKnown RBP11.11□□□□□ -0.63
SSR2-202ENST00000368311 EPRSP07814 1512 aaKnown RBP11.1□□□□□ -0.63
SSR2-202ENST00000368311 ABCC2Q92887 1545 aa11.1□□□□□ -0.63
SSR2-202ENST00000368311 TMC1Q8TDI8 760 aa11.1□□□□□ -0.63
SSR2-202ENST00000368311 TERF2IPQ9NYB0 399 aa11.1□□□□□ -0.63
SSR2-202ENST00000368311 CANXP27824 592 aaKnown RBP11.1□□□□□ -0.63
SSR2-202ENST00000368311 WDR43Q15061 677 aaKnown RBP eCLIP11.1□□□□□ -0.63
SSR2-202ENST00000368311 RPGRIP1LQ68CZ1 1315 aa11.1□□□□□ -0.63
SSR2-202ENST00000368311 ASXL2Q76L83 1435 aa11.1□□□□□ -0.63
SSR2-202ENST00000368311 HRCP23327 699 aa11.09□□□□□ -0.63
SSR2-202ENST00000368311 CCDC144AA2RUR9 1427 aa11.09□□□□□ -0.63
SSR2-202ENST00000368311 PBRM1Q86U86 1689 aa11.09□□□□□ -0.63
SSR2-202ENST00000368311 UGGT2Q9NYU1 1516 aa11.09□□□□□ -0.63
SSR2-202ENST00000368311 RGL3Q3MIN7 710 aa11.08□□□□□ -0.63
SSR2-202ENST00000368311 KNSTRNQ9Y448 316 aa11.08□□□□□ -0.63
SSR2-202ENST00000368311 SRPK2P78362 688 aaKnown RBP11.08□□□□□ -0.64
SSR2-202ENST00000368311 RRBP1Q9P2E9 1410 aaKnown RBP11.08□□□□□ -0.64
SSR2-202ENST00000368311 NPHP1O15259 732 aa11.07□□□□□ -0.64
SSR2-202ENST00000368311 CSB-PGBD3P0DP91 1061 aa11.07□□□□□ -0.64
SSR2-202ENST00000368311 CARD11Q9BXL7 1154 aa11.07□□□□□ -0.64
SSR2-202ENST00000368311 ANO8Q9HCE9 1232 aaPredicted RBP11.06□□□□□ -0.64
SSR2-202ENST00000368311 LRPPRCP42704 1394 aaKnown RBP11.06□□□□□ -0.64
SSR2-202ENST00000368311 DHX57Q6P158 1386 aaKnown RBP11.06□□□□□ -0.64
SSR2-202ENST00000368311 KIF15Q9NS87 1388 aa11.06□□□□□ -0.64
SSR2-202ENST00000368311 PKD2Q13563 968 aa11.06□□□□□ -0.64
SSR2-202ENST00000368311 TOM1O60784 492 aa11.05□□□□□ -0.64
SSR2-202ENST00000368311 NGDNQ8NEJ9 315 aaKnown RBP11.05□□□□□ -0.64
SSR2-202ENST00000368311 NEO1Q92859 1461 aa11.05□□□□□ -0.64
SSR2-202ENST00000368311 UHRF1BP1LA0JNW5 1464 aa11.05□□□□□ -0.64
SSR2-202ENST00000368311 ZNF518AQ6AHZ1 1483 aa11.05□□□□□ -0.64
SSR2-202ENST00000368311 SUPT6HQ7KZ85 1726 aaKnown RBP11.05□□□□□ -0.64
SSR2-202ENST00000368311 CCDC141Q6ZP82 1450 aa11.04□□□□□ -0.64
SSR2-202ENST00000368311 CHMP4BQ9H444 224 aaKnown RBP11.04□□□□□ -0.64
SSR2-202ENST00000368311 GPRASP1Q5JY77 1395 aa11.04□□□□□ -0.64
SSR2-202ENST00000368311 EIF5BO60841 1220 aaKnown RBP11.04□□□□□ -0.64
SSR2-202ENST00000368311 PROSER2Q86WR7 435 aaPredicted RBP11.04□□□□□ -0.64
SSR2-202ENST00000368311 CALD1Q05682 793 aaKnown RBP11.02□□□□□ -0.65
SSR2-202ENST00000368311 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.02□□□□□ -0.65
SSR2-202ENST00000368311 HFM1A2PYH4 1435 aa11.02□□□□□ -0.65
SSR2-202ENST00000368311 RAPGEF6Q8TEU7 1601 aa11.02□□□□□ -0.65
SSR2-202ENST00000368311 EVA1CP58658 441 aa11.02□□□□□ -0.65
SSR2-202ENST00000368311 TXNDC2Q86VQ3 553 aa11.01□□□□□ -0.65
SSR2-202ENST00000368311 MAPK8IP3Q9UPT6 1336 aa11.01□□□□□ -0.65
SSR2-202ENST00000368311 FAM135AQ9P2D6 1515 aa11.01□□□□□ -0.65
SSR2-202ENST00000368311 DAPK1P53355 1430 aa11.01□□□□□ -0.65
SSR2-202ENST00000368311 ABCC10Q5T3U5 1492 aa11□□□□□ -0.65
SSR2-202ENST00000368311 PAK3O75914 559 aaPredicted RBP11□□□□□ -0.65
SSR2-202ENST00000368311 CEP170Q5SW79 1584 aa11□□□□□ -0.65
SSR2-202ENST00000368311 ABCA5Q8WWZ7 1642 aa10.99□□□□□ -0.65
SSR2-202ENST00000368311 DAXXQ9UER7 740 aaPredicted RBP10.99□□□□□ -0.65
SSR2-202ENST00000368311 CTTNBP2Q8WZ74 1663 aa10.99□□□□□ -0.65
SSR2-202ENST00000368311 KIAA0556O60303 1618 aa10.99□□□□□ -0.65
SSR2-202ENST00000368311 C9orf84Q5VXU9 1444 aa10.99□□□□□ -0.65
SSR2-202ENST00000368311 EVC2Q86UK5 1308 aa10.99□□□□□ -0.65
SSR2-202ENST00000368311 PLCH2O75038 1416 aa10.98□□□□□ -0.65
SSR2-202ENST00000368311 UHRF1BP1Q6BDS2 1440 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms